RNA–Protein interactions for RNA: ENST00000242848.8

ZC3H13-201, Transcript of zinc finger CCCH-type containing 13, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZC3H13, Length 8,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H13-201ENST00000242848 DCAF8L2P0C7V8 631 aa13.47□□□□□ -0.25
ZC3H13-201ENST00000242848 FAM9AQ8IZU1 332 aaPredicted RBP13.03□□□□□ -0.32
ZC3H13-201ENST00000242848 MYT1LQ9UL68 1186 aa12.35□□□□□ -0.43
ZC3H13-201ENST00000242848 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
ZC3H13-201ENST00000242848 CHIC1Q5VXU3 224 aa12.11□□□□□ -0.47
ZC3H13-201ENST00000242848 APLP2Q06481 763 aa12.02□□□□□ -0.49
ZC3H13-201ENST00000242848 ATP1B4Q9UN42 357 aaPredicted RBP11.98□□□□□ -0.49
ZC3H13-201ENST00000242848 EHMT2Q96KQ7 1210 aa11.85□□□□□ -0.51
ZC3H13-201ENST00000242848 TTBK1Q5TCY1 1321 aaPredicted RBP11.78□□□□□ -0.52
ZC3H13-201ENST00000242848 SLC4A1APQ9BWU0 796 aaKnown RBP11.76□□□□□ -0.53
ZC3H13-201ENST00000242848 BCANQ96GW7 911 aa11.68□□□□□ -0.54
ZC3H13-201ENST00000242848 ERICH6Q7L0X2 663 aa11.67□□□□□ -0.54
ZC3H13-201ENST00000242848 SLC24A1O60721 1099 aa11.66□□□□□ -0.54
ZC3H13-201ENST00000242848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.65□□□□□ -0.54
ZC3H13-201ENST00000242848 HNRNPUL2Q1KMD3 747 aaKnown RBP11.65□□□□□ -0.54
ZC3H13-201ENST00000242848 PLPPR3Q6T4P5 718 aa11.63□□□□□ -0.55
ZC3H13-201ENST00000242848 RANGAP1P46060 587 aaPredicted RBP11.61□□□□□ -0.55
ZC3H13-201ENST00000242848 AEBP2Q6ZN18 517 aaPredicted RBP11.56□□□□□ -0.56
ZC3H13-201ENST00000242848 CCER1Q8TC90 406 aaPredicted RBP11.53□□□□□ -0.56
ZC3H13-201ENST00000242848 A0A0G2JS52 829 aa11.51□□□□□ -0.57
ZC3H13-201ENST00000242848 ESF1Q9H501 851 aaKnown RBP11.49□□□□□ -0.57
ZC3H13-201ENST00000242848 DCAF8L1A6NGE4 600 aa11.42□□□□□ -0.58
ZC3H13-201ENST00000242848 KRI1Q8N9T8 703 aaKnown RBP11.4□□□□□ -0.59
ZC3H13-201ENST00000242848 MYT1Q01538 1121 aa11.39□□□□□ -0.59
ZC3H13-201ENST00000242848 SCAF1Q9H7N4 1312 aaKnown RBP11.38□□□□□ -0.59
ZC3H13-201ENST00000242848 DAXXQ9UER7 740 aaPredicted RBP11.36□□□□□ -0.59
ZC3H13-201ENST00000242848 POLR3GLQ9BT43 218 aa11.3□□□□□ -0.6
ZC3H13-201ENST00000242848 SUPT5HO00267 1087 aaKnown RBP11.29□□□□□ -0.6
ZC3H13-201ENST00000242848 NCBP3Q53F19 620 aaKnown RBP11.29□□□□□ -0.6
ZC3H13-201ENST00000242848 NPM2Q86SE8 214 aaKnown RBP11.19□□□□□ -0.62
ZC3H13-201ENST00000242848 ZBTB47Q9UFB7 747 aaPredicted RBP11.19□□□□□ -0.62
ZC3H13-201ENST00000242848 HAP1P54257 671 aaPredicted RBP11.16□□□□□ -0.62
ZC3H13-201ENST00000242848 CDK11BP21127 795 aaKnown RBP11.14□□□□□ -0.63
ZC3H13-201ENST00000242848 CDK11AQ9UQ88 783 aaPredicted RBP11.14□□□□□ -0.63
ZC3H13-201ENST00000242848 FBLN2P98095 1184 aa11.13□□□□□ -0.63
ZC3H13-201ENST00000242848 STAG3Q9UJ98 1225 aa11.12□□□□□ -0.63
ZC3H13-201ENST00000242848 PHF23Q9BUL5 403 aaPredicted RBP11.11□□□□□ -0.63
ZC3H13-201ENST00000242848 YTHDC1Q96MU7 727 aaKnown RBP11.11□□□□□ -0.63
ZC3H13-201ENST00000242848 SENP3Q9H4L4 574 aaPredicted RBP11.1□□□□□ -0.63
ZC3H13-201ENST00000242848 NPHP1O15259 732 aa11.1□□□□□ -0.63
ZC3H13-201ENST00000242848 TRHP20396 242 aaPredicted RBP11.1□□□□□ -0.63
ZC3H13-201ENST00000242848 BCL11AQ9H165 835 aa11.08□□□□□ -0.64
ZC3H13-201ENST00000242848 NPM1P06748 294 aaKnown RBP eCLIP11.06□□□□□ -0.64
ZC3H13-201ENST00000242848 NEFMP07197 916 aa11.05□□□□□ -0.64
ZC3H13-201ENST00000242848 C14orf37Q86TY3 774 aa11.05□□□□□ -0.64
ZC3H13-201ENST00000242848 CNGB1Q14028 1251 aaPredicted RBP11.04□□□□□ -0.64
ZC3H13-201ENST00000242848 TULP1O00294 542 aaPredicted RBP11.02□□□□□ -0.65
ZC3H13-201ENST00000242848 CLSPNQ9HAW4 1339 aa10.99□□□□□ -0.65
ZC3H13-201ENST00000242848 PLEKHG5O94827 1062 aa10.99□□□□□ -0.65
ZC3H13-201ENST00000242848 FOXD1Q16676 465 aa10.96□□□□□ -0.66
ZC3H13-201ENST00000242848 UBTFP17480 764 aaKnown RBP10.94□□□□□ -0.66
ZC3H13-201ENST00000242848 NEFLP07196 543 aa10.94□□□□□ -0.66
ZC3H13-201ENST00000242848 PRM3Q9NNZ6 103 aa10.93□□□□□ -0.66
ZC3H13-201ENST00000242848 SHROOM4Q9ULL8 1493 aa10.91□□□□□ -0.66
ZC3H13-201ENST00000242848 ARXQ96QS3 562 aa10.88□□□□□ -0.67
ZC3H13-201ENST00000242848 FKBP8Q14318 412 aa10.87□□□□□ -0.67
ZC3H13-201ENST00000242848 ZBTB7CA1YPR0 619 aa10.87□□□□□ -0.67
ZC3H13-201ENST00000242848 ARID4BQ4LE39 1312 aaPredicted RBP10.87□□□□□ -0.67
ZC3H13-201ENST00000242848 ZNF316A6NFI3 1004 aaPredicted RBP10.86□□□□□ -0.67
ZC3H13-201ENST00000242848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.83□□□□□ -0.682e-8■■□□□ 13.5
ZC3H13-201ENST00000242848 TRIM41Q8WV44 630 aa10.76□□□□□ -0.69
ZC3H13-201ENST00000242848 TMX4Q9H1E5 349 aaPredicted RBP10.75□□□□□ -0.69
ZC3H13-201ENST00000242848 GOLGA2Q08379 1002 aa10.75□□□□□ -0.69
ZC3H13-201ENST00000242848 ITGAEP38570 1179 aa10.74□□□□□ -0.69
ZC3H13-201ENST00000242848 MAP3K9P80192 1104 aa10.72□□□□□ -0.69
ZC3H13-201ENST00000242848 CHGAP10645 457 aaKnown RBP10.72□□□□□ -0.69
ZC3H13-201ENST00000242848 CLSTN1O94985 981 aa10.71□□□□□ -0.7
ZC3H13-201ENST00000242848 TRIM26Q12899 539 aaPredicted RBP10.69□□□□□ -0.7
ZC3H13-201ENST00000242848 NEUROD2Q15784 382 aa10.68□□□□□ -0.7
ZC3H13-201ENST00000242848 NISCHQ9Y2I1 1504 aa10.65□□□□□ -0.7
ZC3H13-201ENST00000242848 CNKSR2Q8WXI2 1034 aa10.65□□□□□ -0.7
ZC3H13-201ENST00000242848 CCDC9Q9Y3X0 531 aaKnown RBP10.63□□□□□ -0.71
ZC3H13-201ENST00000242848 CANXP27824 592 aaKnown RBP10.63□□□□□ -0.71
ZC3H13-201ENST00000242848 KLHL34Q8N239 644 aa10.63□□□□□ -0.71
ZC3H13-201ENST00000242848 MEX3CQ5U5Q3 659 aaKnown RBP10.63□□□□□ -0.71
ZC3H13-201ENST00000242848 LMOD2Q6P5Q4 547 aa10.63□□□□□ -0.71
ZC3H13-201ENST00000242848 PCGF6Q9BYE7 350 aa10.63□□□□□ -0.71
ZC3H13-201ENST00000242848 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.62□□□□□ -0.71
ZC3H13-201ENST00000242848 CFAP44Q96MT7 982 aa10.61□□□□□ -0.71
ZC3H13-201ENST00000242848 ISY1Q9ULR0 285 aaKnown RBP10.57□□□□□ -0.72
ZC3H13-201ENST00000242848 KAT6BQ8WYB5 2073 aa10.55□□□□□ -0.72
ZC3H13-201ENST00000242848 G3V3G9 751 aa10.55□□□□□ -0.72
ZC3H13-201ENST00000242848 PPP1R15AO75807 674 aaPredicted RBP10.55□□□□□ -0.72
ZC3H13-201ENST00000242848 DCAF8Q5TAQ9 597 aa10.55□□□□□ -0.72
ZC3H13-201ENST00000242848 TRIM52Q96A61 297 aa10.55□□□□□ -0.72
ZC3H13-201ENST00000242848 CENPBP07199 599 aaPredicted RBP10.54□□□□□ -0.72
ZC3H13-201ENST00000242848 ZNF326Q5BKZ1 582 aaKnown RBP10.51□□□□□ -0.73
ZC3H13-201ENST00000242848 CWC22Q9HCG8 908 aaKnown RBP10.5□□□□□ -0.73
ZC3H13-201ENST00000242848 SF3B2Q13435 895 aaKnown RBP10.5□□□□□ -0.73
ZC3H13-201ENST00000242848 WDR70Q9NW82 654 aa10.48□□□□□ -0.73
ZC3H13-201ENST00000242848 MSH5O43196 834 aa10.47□□□□□ -0.73
ZC3H13-201ENST00000242848 EIF4G2P78344 907 aaKnown RBP eCLIP10.43□□□□□ -0.74
ZC3H13-201ENST00000242848 CHMP7Q8WUX9 453 aaPredicted RBP10.42□□□□□ -0.74
ZC3H13-201ENST00000242848 RTL5Q5HYW3 569 aaPredicted RBP10.38□□□□□ -0.75
ZC3H13-201ENST00000242848 ZNF777Q9ULD5 760 aaPredicted RBP10.38□□□□□ -0.75
ZC3H13-201ENST00000242848 FBXO3Q9UK99 471 aa10.37□□□□□ -0.75
ZC3H13-201ENST00000242848 FAM50AQ14320 339 aaKnown RBP10.37□□□□□ -0.75
ZC3H13-201ENST00000242848 PPP1R1BQ9UD71 204 aaPredicted RBP10.36□□□□□ -0.75
ZC3H13-201ENST00000242848 PPP4R2Q9NY27 417 aa10.36□□□□□ -0.75
ZC3H13-201ENST00000242848 ARID3CA6NKF2 412 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms