RNA–Protein interactions for RNA: ENST00000439966.5

MERTK-204, Transcript of MER proto-oncogene, tyrosine kinase, humanhuman

TSL 1 (best)

Gene MERTK, Length 2,972 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MERTK-204ENST00000439966 PELP1Q8IZL8 1130 aaKnown RBP18.98■□□□□ 0.63
MERTK-204ENST00000439966 HRCP23327 699 aa18.61■□□□□ 0.57
MERTK-204ENST00000439966 MYT1Q01538 1121 aa18.45■□□□□ 0.54
MERTK-204ENST00000439966 PPARGC1BQ86YN6 1023 aaKnown RBP18.26■□□□□ 0.51
MERTK-204ENST00000439966 NISCHQ9Y2I1 1504 aa18.2■□□□□ 0.5
MERTK-204ENST00000439966 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
MERTK-204ENST00000439966 PCGF6Q9BYE7 350 aa17.97■□□□□ 0.47
MERTK-204ENST00000439966 TTBK1Q5TCY1 1321 aaPredicted RBP17.48■□□□□ 0.39
MERTK-204ENST00000439966 MYO15BQ96JP2 1530 aa17.36■□□□□ 0.37
MERTK-204ENST00000439966 ACIN1Q9UKV3 1341 aaKnown RBP17.35■□□□□ 0.37
MERTK-204ENST00000439966 NEUROD1Q13562 356 aa17.29■□□□□ 0.36
MERTK-204ENST00000439966 GTF3C3Q9Y5Q9 886 aa17.29■□□□□ 0.36
MERTK-204ENST00000439966 BCL11AQ9H165 835 aa17.22■□□□□ 0.35
MERTK-204ENST00000439966 ZEB1P37275 1124 aaPredicted RBP17.22■□□□□ 0.35
MERTK-204ENST00000439966 SUPT5HO00267 1087 aaKnown RBP17.2■□□□□ 0.34
MERTK-204ENST00000439966 TRIM26Q12899 539 aaPredicted RBP17.14■□□□□ 0.33
MERTK-204ENST00000439966 CENPBP07199 599 aaPredicted RBP17.11■□□□□ 0.33
MERTK-204ENST00000439966 CHIC1Q5VXU3 224 aa17.07■□□□□ 0.32
MERTK-204ENST00000439966 FAM9AQ8IZU1 332 aaPredicted RBP17.07■□□□□ 0.32
MERTK-204ENST00000439966 PRKCSHP14314 528 aaPredicted RBP17.06■□□□□ 0.32
MERTK-204ENST00000439966 DCAF1Q9Y4B6 1507 aa17.05■□□□□ 0.32
MERTK-204ENST00000439966 SHROOM4Q9ULL8 1493 aa16.94■□□□□ 0.3
MERTK-204ENST00000439966 CCDC180Q9P1Z9 1646 aa16.93■□□□□ 0.3
MERTK-204ENST00000439966 LOC105371045A0A1W2PR82 267 aa16.83■□□□□ 0.29
MERTK-204ENST00000439966 ANP32EQ9BTT0 268 aa16.75■□□□□ 0.27
MERTK-204ENST00000439966 DIEXFQ68CQ4 756 aaKnown RBP16.71■□□□□ 0.27
MERTK-204ENST00000439966 ERICH6Q7L0X2 663 aa16.65■□□□□ 0.26
MERTK-204ENST00000439966 CSRNP3Q8WYN3 585 aa16.62■□□□□ 0.25
MERTK-204ENST00000439966 YTHDC1Q96MU7 727 aaKnown RBP16.59■□□□□ 0.25
MERTK-204ENST00000439966 APLP2Q06481 763 aa16.45■□□□□ 0.22
MERTK-204ENST00000439966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.4■□□□□ 0.22
MERTK-204ENST00000439966 CCER1Q8TC90 406 aaPredicted RBP16.4■□□□□ 0.22
MERTK-204ENST00000439966 TSHZ2Q9NRE2 1034 aa16.37■□□□□ 0.21
MERTK-204ENST00000439966 TRIM41Q8WV44 630 aa16.3■□□□□ 0.2
MERTK-204ENST00000439966 SUPT16HQ9Y5B9 1047 aaKnown RBP16.25■□□□□ 0.19
MERTK-204ENST00000439966 MIER1Q8N108 512 aa16.21■□□□□ 0.19
MERTK-204ENST00000439966 ZNF316A6NFI3 1004 aaPredicted RBP16.19■□□□□ 0.18
MERTK-204ENST00000439966 ANO8Q9HCE9 1232 aaPredicted RBP16.11■□□□□ 0.17
MERTK-204ENST00000439966 CLSPNQ9HAW4 1339 aa16.1■□□□□ 0.17
MERTK-204ENST00000439966 EHMT2Q96KQ7 1210 aa15.97■□□□□ 0.15
MERTK-204ENST00000439966 RBM19Q9Y4C8 960 aaKnown RBP15.93■□□□□ 0.14
MERTK-204ENST00000439966 BCANQ96GW7 911 aa15.9■□□□□ 0.14
MERTK-204ENST00000439966 MSH5O43196 834 aa15.85■□□□□ 0.13
MERTK-204ENST00000439966 SALL2Q9Y467 1007 aaPredicted RBP15.85■□□□□ 0.13
MERTK-204ENST00000439966 CCDC136Q96JN2 1154 aa15.81■□□□□ 0.12
MERTK-204ENST00000439966 DEKP35659 375 aaKnown RBP15.81■□□□□ 0.12
MERTK-204ENST00000439966 UBE2Q2Q8WVN8 375 aa15.78■□□□□ 0.12
MERTK-204ENST00000439966 MYT1LQ9UL68 1186 aa15.74■□□□□ 0.11
MERTK-204ENST00000439966 FKBP8Q14318 412 aa15.72■□□□□ 0.11
MERTK-204ENST00000439966 ERICH6BQ5W0A0 696 aa15.65■□□□□ 0.1
MERTK-204ENST00000439966 ITGAEP38570 1179 aa15.64■□□□□ 0.09
MERTK-204ENST00000439966 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.61■□□□□ 0.09
MERTK-204ENST00000439966 FANCIQ9NVI1 1328 aa15.6■□□□□ 0.09
MERTK-204ENST00000439966 EIF5BO60841 1220 aaKnown RBP15.59■□□□□ 0.09
MERTK-204ENST00000439966 ZCCHC6Q5VYS8 1495 aaKnown RBP15.57■□□□□ 0.08
MERTK-204ENST00000439966 NEFLP07196 543 aa15.55■□□□□ 0.08
MERTK-204ENST00000439966 RTN4Q9NQC3 1192 aaKnown RBP15.52■□□□□ 0.07
MERTK-204ENST00000439966 IL27Q8NEV9 243 aa15.48■□□□□ 0.07
MERTK-204ENST00000439966 NBR1Q14596 966 aa15.48■□□□□ 0.07
MERTK-204ENST00000439966 KCNH8Q96L42 1107 aa15.46■□□□□ 0.07
MERTK-204ENST00000439966 DCAF8L2P0C7V8 631 aa15.45■□□□□ 0.06
MERTK-204ENST00000439966 PKNOX2Q96KN3 472 aa15.44■□□□□ 0.06
MERTK-204ENST00000439966 CDK11AQ9UQ88 783 aaPredicted RBP15.42■□□□□ 0.06
MERTK-204ENST00000439966 SLC24A1O60721 1099 aa15.41■□□□□ 0.06
MERTK-204ENST00000439966 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
MERTK-204ENST00000439966 PLEKHG5O94827 1062 aa15.32■□□□□ 0.04
MERTK-204ENST00000439966 NOP58Q9Y2X3 529 aaKnown RBP15.3■□□□□ 0.04
MERTK-204ENST00000439966 RTL5Q5HYW3 569 aaPredicted RBP15.3■□□□□ 0.04
MERTK-204ENST00000439966 PAK3O75914 559 aaPredicted RBP15.26■□□□□ 0.03
MERTK-204ENST00000439966 WRNQ14191 1432 aaPredicted RBP eCLIP15.25■□□□□ 0.03
MERTK-204ENST00000439966 TRIM52Q96A61 297 aa15.23■□□□□ 0.03
MERTK-204ENST00000439966 PODXL2Q9NZ53 605 aa15.21■□□□□ 0.03
MERTK-204ENST00000439966 IRX6P78412 446 aaPredicted RBP15.19■□□□□ 0.02
MERTK-204ENST00000439966 DAXXQ9UER7 740 aaPredicted RBP15.16■□□□□ 0.02
MERTK-204ENST00000439966 TIMELESSQ9UNS1 1208 aa15.11■□□□□ 0.01
MERTK-204ENST00000439966 CEP162Q5TB80 1403 aa15.1■□□□□ 0.01
MERTK-204ENST00000439966 DDX10Q13206 875 aaKnown RBP15.06■□□□□ 0
MERTK-204ENST00000439966 ZBTB47Q9UFB7 747 aaPredicted RBP15.05■□□□□ -0
MERTK-204ENST00000439966 GLIPR1L2Q4G1C9 344 aa15.04■□□□□ -0
MERTK-204ENST00000439966 ZMYND15Q9H091 742 aa15.04■□□□□ -0
MERTK-204ENST00000439966 BRPF3Q9ULD4 1205 aa15.03■□□□□ -0
MERTK-204ENST00000439966 C11orf95C9JLR9 678 aaPredicted RBP15.03■□□□□ -0
MERTK-204ENST00000439966 IPO9Q96P70 1041 aaKnown RBP15.02■□□□□ -0
MERTK-204ENST00000439966 VSIG10Q8N0Z9 540 aa15.02□□□□□ -0.01
MERTK-204ENST00000439966 PPP4R2Q9NY27 417 aa15.02□□□□□ -0.01
MERTK-204ENST00000439966 ANP32AP39687 249 aaKnown RBP15.01□□□□□ -0.01
MERTK-204ENST00000439966 WASHC2AQ641Q2 1341 aa15.01□□□□□ -0.01
MERTK-204ENST00000439966 RB1CC1Q8TDY2 1594 aa15□□□□□ -0.01
MERTK-204ENST00000439966 DHX57Q6P158 1386 aaKnown RBP14.99□□□□□ -0.01
MERTK-204ENST00000439966 RSPH6AQ9H0K4 717 aa14.98□□□□□ -0.01
MERTK-204ENST00000439966 RSF1Q96T23 1441 aaPredicted RBP14.98□□□□□ -0.01
MERTK-204ENST00000439966 B4GALNT3Q6L9W6 998 aa14.98□□□□□ -0.01
MERTK-204ENST00000439966 NEFMP07197 916 aa14.96□□□□□ -0.02
MERTK-204ENST00000439966 WASHC2CQ9Y4E1 1318 aa14.95□□□□□ -0.02
MERTK-204ENST00000439966 CCER2I3L3R5 266 aa14.94□□□□□ -0.02
MERTK-204ENST00000439966 UBTFP17480 764 aaKnown RBP14.93□□□□□ -0.02
MERTK-204ENST00000439966 ANP32CO43423 234 aa14.92□□□□□ -0.02
MERTK-204ENST00000439966 TNIKQ9UKE5 1360 aa14.91□□□□□ -0.02
MERTK-204ENST00000439966 LAS1LQ9Y4W2 734 aaKnown RBP14.91□□□□□ -0.02
MERTK-204ENST00000439966 HNRNPUQ00839 825 aaKnown RBP eCLIP14.9□□□□□ -0.023e-6■■■■□ 21.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms