RNA–Protein interactions for RNA: ENST00000361070.8

RFWD3-201, Transcript of ring finger and WD repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFWD3, Length 4,957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-201ENST00000361070 NISCHQ9Y2I1 1504 aa24■■□□□ 1.43
RFWD3-201ENST00000361070 DCAF8L2P0C7V8 631 aa21.87■■□□□ 1.09
RFWD3-201ENST00000361070 SUPT5HO00267 1087 aaKnown RBP21.86■■□□□ 1.09
RFWD3-201ENST00000361070 SHROOM4Q9ULL8 1493 aa21.73■■□□□ 1.07
RFWD3-201ENST00000361070 PCGF6Q9BYE7 350 aa20.94■□□□□ 0.94
RFWD3-201ENST00000361070 HRCP23327 699 aa20.74■□□□□ 0.91
RFWD3-201ENST00000361070 ZEB1P37275 1124 aaPredicted RBP20.72■□□□□ 0.91
RFWD3-201ENST00000361070 CHIC1Q5VXU3 224 aa20.57■□□□□ 0.88
RFWD3-201ENST00000361070 PELP1Q8IZL8 1130 aaKnown RBP20.46■□□□□ 0.87
RFWD3-201ENST00000361070 TRIM26Q12899 539 aaPredicted RBP20.43■□□□□ 0.86
RFWD3-201ENST00000361070 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
RFWD3-201ENST00000361070 EHMT2Q96KQ7 1210 aa20.38■□□□□ 0.85
RFWD3-201ENST00000361070 FAM9AQ8IZU1 332 aaPredicted RBP20.35■□□□□ 0.85
RFWD3-201ENST00000361070 CENPBP07199 599 aaPredicted RBP20.19■□□□□ 0.82
RFWD3-201ENST00000361070 ZCCHC6Q5VYS8 1495 aaKnown RBP20.18■□□□□ 0.82
RFWD3-201ENST00000361070 LOC105371045A0A1W2PR82 267 aa20.11■□□□□ 0.81
RFWD3-201ENST00000361070 CCER1Q8TC90 406 aaPredicted RBP20.11■□□□□ 0.81
RFWD3-201ENST00000361070 APLP2Q06481 763 aa20.06■□□□□ 0.8
RFWD3-201ENST00000361070 CCDC180Q9P1Z9 1646 aa20.04■□□□□ 0.8
RFWD3-201ENST00000361070 PPARGC1BQ86YN6 1023 aaKnown RBP20.03■□□□□ 0.8
RFWD3-201ENST00000361070 MYT1Q01538 1121 aa19.95■□□□□ 0.78
RFWD3-201ENST00000361070 DCAF1Q9Y4B6 1507 aa19.95■□□□□ 0.78
RFWD3-201ENST00000361070 TTBK1Q5TCY1 1321 aaPredicted RBP19.83■□□□□ 0.77
RFWD3-201ENST00000361070 UBTFP17480 764 aaKnown RBP19.73■□□□□ 0.75
RFWD3-201ENST00000361070 MYO15BQ96JP2 1530 aa19.69■□□□□ 0.74
RFWD3-201ENST00000361070 DIEXFQ68CQ4 756 aaKnown RBP19.49■□□□□ 0.71
RFWD3-201ENST00000361070 YTHDC1Q96MU7 727 aaKnown RBP19.49■□□□□ 0.71
RFWD3-201ENST00000361070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.47■□□□□ 0.71
RFWD3-201ENST00000361070 RANGAP1P46060 587 aaPredicted RBP19.37■□□□□ 0.69
RFWD3-201ENST00000361070 SCRIBQ14160 1630 aa19.33■□□□□ 0.68
RFWD3-201ENST00000361070 ACIN1Q9UKV3 1341 aaKnown RBP19.28■□□□□ 0.68
RFWD3-201ENST00000361070 HNRNPUL2Q1KMD3 747 aaKnown RBP19.24■□□□□ 0.67
RFWD3-201ENST00000361070 NEFLP07196 543 aa19.22■□□□□ 0.67
RFWD3-201ENST00000361070 GTF3C3Q9Y5Q9 886 aa19.22■□□□□ 0.67
RFWD3-201ENST00000361070 ABCC9O60706 1549 aa19.19■□□□□ 0.66
RFWD3-201ENST00000361070 RSF1Q96T23 1441 aaPredicted RBP19.18■□□□□ 0.66
RFWD3-201ENST00000361070 ZNF316A6NFI3 1004 aaPredicted RBP19.18■□□□□ 0.66
RFWD3-201ENST00000361070 ERICH6Q7L0X2 663 aa19.1■□□□□ 0.65
RFWD3-201ENST00000361070 RB1CC1Q8TDY2 1594 aa19.07■□□□□ 0.64
RFWD3-201ENST00000361070 CSRNP3Q8WYN3 585 aa19.06■□□□□ 0.64
RFWD3-201ENST00000361070 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
RFWD3-201ENST00000361070 ATP1B4Q9UN42 357 aaPredicted RBP19■□□□□ 0.63
RFWD3-201ENST00000361070 CLSPNQ9HAW4 1339 aa18.93■□□□□ 0.62
RFWD3-201ENST00000361070 NEUROD1Q13562 356 aa18.9■□□□□ 0.62
RFWD3-201ENST00000361070 NACADO15069 1562 aa18.89■□□□□ 0.62
RFWD3-201ENST00000361070 EEA1Q15075 1411 aa18.89■□□□□ 0.61
RFWD3-201ENST00000361070 ITGAEP38570 1179 aa18.89■□□□□ 0.61
RFWD3-201ENST00000361070 CEP162Q5TB80 1403 aa18.79■□□□□ 0.6
RFWD3-201ENST00000361070 TNIKQ9UKE5 1360 aa18.75■□□□□ 0.59
RFWD3-201ENST00000361070 GOLGA3Q08378 1498 aa18.74■□□□□ 0.59
RFWD3-201ENST00000361070 PABPN1Q86U42 306 aaKnown RBP eCLIP18.72■□□□□ 0.59
RFWD3-201ENST00000361070 BAZ1AQ9NRL2 1556 aaPredicted RBP18.7■□□□□ 0.58
RFWD3-201ENST00000361070 CLIP1P30622 1438 aa18.64■□□□□ 0.57
RFWD3-201ENST00000361070 FAM50AQ14320 339 aaKnown RBP18.62■□□□□ 0.57
RFWD3-201ENST00000361070 CECR2Q9BXF3 1484 aa18.62■□□□□ 0.57
RFWD3-201ENST00000361070 ANP32CO43423 234 aa18.59■□□□□ 0.57
RFWD3-201ENST00000361070 MIER1Q8N108 512 aa18.58■□□□□ 0.56
RFWD3-201ENST00000361070 CEP164Q9UPV0 1460 aa18.57■□□□□ 0.56
RFWD3-201ENST00000361070 MROH2BQ7Z745 1585 aa18.56■□□□□ 0.56
RFWD3-201ENST00000361070 WRNQ14191 1432 aaPredicted RBP eCLIP18.53■□□□□ 0.56
RFWD3-201ENST00000361070 BCANQ96GW7 911 aa18.47■□□□□ 0.55
RFWD3-201ENST00000361070 CDK11AQ9UQ88 783 aaPredicted RBP18.41■□□□□ 0.54
RFWD3-201ENST00000361070 WIZO95785 1651 aa18.41■□□□□ 0.54
RFWD3-201ENST00000361070 TOP2AP11388 1531 aaKnown RBP18.39■□□□□ 0.53
RFWD3-201ENST00000361070 SOGA1O94964 1423 aa18.39■□□□□ 0.53
RFWD3-201ENST00000361070 CCDC88BA6NC98 1476 aa18.37■□□□□ 0.53
RFWD3-201ENST00000361070 ABCC8Q09428 1581 aa18.35■□□□□ 0.53
RFWD3-201ENST00000361070 FKBP8Q14318 412 aa18.32■□□□□ 0.52
RFWD3-201ENST00000361070 VPS8Q8N3P4 1428 aa18.31■□□□□ 0.52
RFWD3-201ENST00000361070 TRIM52Q96A61 297 aa18.31■□□□□ 0.52
RFWD3-201ENST00000361070 TONSLQ96HA7 1378 aa18.28■□□□□ 0.52
RFWD3-201ENST00000361070 BAZ1BQ9UIG0 1483 aaKnown RBP18.28■□□□□ 0.52
RFWD3-201ENST00000361070 POLR3GLQ9BT43 218 aa18.27■□□□□ 0.52
RFWD3-201ENST00000361070 DDX10Q13206 875 aaKnown RBP18.25■□□□□ 0.51
RFWD3-201ENST00000361070 RTL5Q5HYW3 569 aaPredicted RBP18.24■□□□□ 0.51
RFWD3-201ENST00000361070 KIF27Q86VH2 1401 aa18.2■□□□□ 0.5
RFWD3-201ENST00000361070 DAXXQ9UER7 740 aaPredicted RBP18.2■□□□□ 0.5
RFWD3-201ENST00000361070 P3H3Q8IVL6 736 aa18.18■□□□□ 0.5
RFWD3-201ENST00000361070 SMARCA4P51532 1647 aa18.15■□□□□ 0.5
RFWD3-201ENST00000361070 MYT1LQ9UL68 1186 aa18.14■□□□□ 0.49
RFWD3-201ENST00000361070 SUPT16HQ9Y5B9 1047 aaKnown RBP18.14■□□□□ 0.49
RFWD3-201ENST00000361070 CCNB3Q8WWL7 1395 aa18.12■□□□□ 0.49
RFWD3-201ENST00000361070 HNRNPUQ00839 825 aaKnown RBP eCLIP18.1■□□□□ 0.49
RFWD3-201ENST00000361070 ANP32EQ9BTT0 268 aa18.09■□□□□ 0.49
RFWD3-201ENST00000361070 CNGB1Q14028 1251 aaPredicted RBP18.07■□□□□ 0.48
RFWD3-201ENST00000361070 TIMELESSQ9UNS1 1208 aa18.07■□□□□ 0.48
RFWD3-201ENST00000361070 SMARCA2P51531 1590 aa18.05■□□□□ 0.48
RFWD3-201ENST00000361070 ANP32AP39687 249 aaKnown RBP18.01■□□□□ 0.47
RFWD3-201ENST00000361070 MTUS2Q5JR59 1369 aa18.01■□□□□ 0.47
RFWD3-201ENST00000361070 FHAD1B1AJZ9 1412 aa17.99■□□□□ 0.47
RFWD3-201ENST00000361070 RUSC2Q8N2Y8 1516 aa17.96■□□□□ 0.47
RFWD3-201ENST00000361070 SETD5Q9C0A6 1442 aa17.96■□□□□ 0.47
RFWD3-201ENST00000361070 CCER2I3L3R5 266 aa17.95■□□□□ 0.46
RFWD3-201ENST00000361070 RAPGEF2Q9Y4G8 1499 aa17.94■□□□□ 0.46
RFWD3-201ENST00000361070 ZNF326Q5BKZ1 582 aaKnown RBP17.93■□□□□ 0.46
RFWD3-201ENST00000361070 DHX57Q6P158 1386 aaKnown RBP17.92■□□□□ 0.46
RFWD3-201ENST00000361070 KIF21BO75037 1637 aa17.91■□□□□ 0.46
RFWD3-201ENST00000361070 EIF4G2P78344 907 aaKnown RBP eCLIP17.91■□□□□ 0.46
RFWD3-201ENST00000361070 KANK4Q5T7N3 995 aaPredicted RBP17.9■□□□□ 0.46
RFWD3-201ENST00000361070 FAM9BQ8IZU0 186 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms