RNA–Protein interactions for RNA: ENST00000380045.7

SCML1-203, Transcript of Scm polycomb group protein like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCML1, Length 2,679 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1-203ENST00000380045 NISCHQ9Y2I1 1504 aa15.19■□□□□ 0.02
SCML1-203ENST00000380045 SHROOM4Q9ULL8 1493 aa13.6□□□□□ -0.23
SCML1-203ENST00000380045 SUPT5HO00267 1087 aaKnown RBP13.43□□□□□ -0.26
SCML1-203ENST00000380045 DCAF8L2P0C7V8 631 aa13.17□□□□□ -0.3
SCML1-203ENST00000380045 CHIC1Q5VXU3 224 aa12.92□□□□□ -0.34
SCML1-203ENST00000380045 MYO15BQ96JP2 1530 aa12.92□□□□□ -0.34
SCML1-203ENST00000380045 PCGF6Q9BYE7 350 aa12.88□□□□□ -0.35
SCML1-203ENST00000380045 ZCCHC6Q5VYS8 1495 aaKnown RBP12.83□□□□□ -0.36
SCML1-203ENST00000380045 PPARGC1BQ86YN6 1023 aaKnown RBP12.8□□□□□ -0.36
SCML1-203ENST00000380045 HRCP23327 699 aa12.79□□□□□ -0.36
SCML1-203ENST00000380045 LOC105371045A0A1W2PR82 267 aa12.76□□□□□ -0.37
SCML1-203ENST00000380045 EHMT2Q96KQ7 1210 aa12.58□□□□□ -0.4
SCML1-203ENST00000380045 CCDC180Q9P1Z9 1646 aa12.58□□□□□ -0.4
SCML1-203ENST00000380045 FAM9AQ8IZU1 332 aaPredicted RBP12.49□□□□□ -0.41
SCML1-203ENST00000380045 AEBP2Q6ZN18 517 aaPredicted RBP12.39□□□□□ -0.43
SCML1-203ENST00000380045 TRIM26Q12899 539 aaPredicted RBP12.35□□□□□ -0.43
SCML1-203ENST00000380045 TRIM41Q8WV44 630 aa12.33□□□□□ -0.44
SCML1-203ENST00000380045 DCAF1Q9Y4B6 1507 aa12.32□□□□□ -0.44
SCML1-203ENST00000380045 SCRIBQ14160 1630 aa12.21□□□□□ -0.45
SCML1-203ENST00000380045 RSF1Q96T23 1441 aaPredicted RBP12.19□□□□□ -0.46
SCML1-203ENST00000380045 TTBK1Q5TCY1 1321 aaPredicted RBP12.17□□□□□ -0.46
SCML1-203ENST00000380045 RB1CC1Q8TDY2 1594 aa12.11□□□□□ -0.47
SCML1-203ENST00000380045 ABCC9O60706 1549 aa12.11□□□□□ -0.47
SCML1-203ENST00000380045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.07□□□□□ -0.48
SCML1-203ENST00000380045 CECR2Q9BXF3 1484 aa12.05□□□□□ -0.48
SCML1-203ENST00000380045 ZEB1P37275 1124 aaPredicted RBP12.02□□□□□ -0.49
SCML1-203ENST00000380045 SCAF1Q9H7N4 1312 aaKnown RBP12.01□□□□□ -0.49
SCML1-203ENST00000380045 CCER1Q8TC90 406 aaPredicted RBP11.96□□□□□ -0.49
SCML1-203ENST00000380045 MROH2BQ7Z745 1585 aa11.94□□□□□ -0.5
SCML1-203ENST00000380045 WIZO95785 1651 aa11.88□□□□□ -0.51
SCML1-203ENST00000380045 NEUROD1Q13562 356 aa11.83□□□□□ -0.52
SCML1-203ENST00000380045 UBTFP17480 764 aaKnown RBP11.78□□□□□ -0.52
SCML1-203ENST00000380045 RANGAP1P46060 587 aaPredicted RBP11.78□□□□□ -0.52
SCML1-203ENST00000380045 ABCC8Q09428 1581 aa11.78□□□□□ -0.52
SCML1-203ENST00000380045 DIEXFQ68CQ4 756 aaKnown RBP11.78□□□□□ -0.52
SCML1-203ENST00000380045 CCDC88BA6NC98 1476 aa11.76□□□□□ -0.53
SCML1-203ENST00000380045 YTHDC1Q96MU7 727 aaKnown RBP11.74□□□□□ -0.53
SCML1-203ENST00000380045 ACIN1Q9UKV3 1341 aaKnown RBP11.74□□□□□ -0.53
SCML1-203ENST00000380045 SOGA1O94964 1423 aa11.74□□□□□ -0.53
SCML1-203ENST00000380045 GTF3C3Q9Y5Q9 886 aa11.73□□□□□ -0.53
SCML1-203ENST00000380045 PABPN1Q86U42 306 aaKnown RBP eCLIP11.72□□□□□ -0.53
SCML1-203ENST00000380045 HNRNPUL2Q1KMD3 747 aaKnown RBP11.7□□□□□ -0.54
SCML1-203ENST00000380045 RUSC2Q8N2Y8 1516 aa11.7□□□□□ -0.54
SCML1-203ENST00000380045 NACADO15069 1562 aa11.69□□□□□ -0.54
SCML1-203ENST00000380045 CEP162Q5TB80 1403 aa11.67□□□□□ -0.54
SCML1-203ENST00000380045 CSRNP3Q8WYN3 585 aa11.65□□□□□ -0.54
SCML1-203ENST00000380045 BAZ1AQ9NRL2 1556 aaPredicted RBP11.62□□□□□ -0.55
SCML1-203ENST00000380045 PELP1Q8IZL8 1130 aaKnown RBP11.62□□□□□ -0.55
SCML1-203ENST00000380045 CENPBP07199 599 aaPredicted RBP11.59□□□□□ -0.55
SCML1-203ENST00000380045 EIF4G1Q04637 1599 aaKnown RBP11.57□□□□□ -0.56
SCML1-203ENST00000380045 ZNF316A6NFI3 1004 aaPredicted RBP11.57□□□□□ -0.56
SCML1-203ENST00000380045 MIER1Q8N108 512 aa11.56□□□□□ -0.56
SCML1-203ENST00000380045 TNIKQ9UKE5 1360 aa11.54□□□□□ -0.56
SCML1-203ENST00000380045 SMARCA2P51531 1590 aa11.53□□□□□ -0.56
SCML1-203ENST00000380045 TOP2AP11388 1531 aaKnown RBP11.52□□□□□ -0.57
SCML1-203ENST00000380045 WRNQ14191 1432 aaPredicted RBP eCLIP11.51□□□□□ -0.57
SCML1-203ENST00000380045 SMARCA4P51532 1647 aa11.5□□□□□ -0.57
SCML1-203ENST00000380045 APLP2Q06481 763 aa11.47□□□□□ -0.57
SCML1-203ENST00000380045 GOLGA3Q08378 1498 aa11.44□□□□□ -0.58
SCML1-203ENST00000380045 CLIP1P30622 1438 aa11.42□□□□□ -0.58
SCML1-203ENST00000380045 ITGAEP38570 1179 aa11.42□□□□□ -0.58
SCML1-203ENST00000380045 UNC13AQ9UPW8 1703 aa11.39□□□□□ -0.59
SCML1-203ENST00000380045 RAPGEF2Q9Y4G8 1499 aa11.38□□□□□ -0.59
SCML1-203ENST00000380045 SYNJ1O43426 1573 aa11.37□□□□□ -0.59
SCML1-203ENST00000380045 EEA1Q15075 1411 aa11.37□□□□□ -0.59
SCML1-203ENST00000380045 KANK4Q5T7N3 995 aaPredicted RBP11.36□□□□□ -0.59
SCML1-203ENST00000380045 CEP164Q9UPV0 1460 aa11.33□□□□□ -0.6
SCML1-203ENST00000380045 BICRAQ9NZM4 1560 aa11.33□□□□□ -0.6
SCML1-203ENST00000380045 VPS8Q8N3P4 1428 aa11.31□□□□□ -0.6
SCML1-203ENST00000380045 DNAJC5BQ9UF47 199 aa11.27□□□□□ -0.6
SCML1-203ENST00000380045 KCNH8Q96L42 1107 aa11.27□□□□□ -0.61
SCML1-203ENST00000380045 KIF21BO75037 1637 aa11.25□□□□□ -0.61
SCML1-203ENST00000380045 BAZ1BQ9UIG0 1483 aaKnown RBP11.24□□□□□ -0.61
SCML1-203ENST00000380045 ATAD2BQ9ULI0 1458 aa11.24□□□□□ -0.61
SCML1-203ENST00000380045 DHX57Q6P158 1386 aaKnown RBP11.23□□□□□ -0.61
SCML1-203ENST00000380045 ATP1B4Q9UN42 357 aaPredicted RBP11.22□□□□□ -0.61
SCML1-203ENST00000380045 HIRIP3Q9BW71 556 aaPredicted RBP11.22□□□□□ -0.61
SCML1-203ENST00000380045 P3H3Q8IVL6 736 aa11.2□□□□□ -0.62
SCML1-203ENST00000380045 BCANQ96GW7 911 aa11.19□□□□□ -0.62
SCML1-203ENST00000380045 SUPT16HQ9Y5B9 1047 aaKnown RBP11.18□□□□□ -0.62
SCML1-203ENST00000380045 ARAP1Q96P48 1450 aa11.17□□□□□ -0.62
SCML1-203ENST00000380045 SIN3AQ96ST3 1273 aa11.15□□□□□ -0.62
SCML1-203ENST00000380045 FAM50AQ14320 339 aaKnown RBP11.13□□□□□ -0.63
SCML1-203ENST00000380045 DDX10Q13206 875 aaKnown RBP11.13□□□□□ -0.63
SCML1-203ENST00000380045 POTEDQ86YR6 584 aa11.13□□□□□ -0.63
SCML1-203ENST00000380045 PEG3Q9GZU2 1588 aa11.11□□□□□ -0.63
SCML1-203ENST00000380045 PRXQ9BXM0 1461 aa11.09□□□□□ -0.63
SCML1-203ENST00000380045 CCNB3Q8WWL7 1395 aa11.09□□□□□ -0.63
SCML1-203ENST00000380045 TOP2BQ02880 1626 aa11.09□□□□□ -0.63
SCML1-203ENST00000380045 RAB3GAP2Q9H2M9 1393 aa11.07□□□□□ -0.64
SCML1-203ENST00000380045 CUX1P39880 1505 aa11.06□□□□□ -0.64
SCML1-203ENST00000380045 TRIM52Q96A61 297 aa11.05□□□□□ -0.64
SCML1-203ENST00000380045 KIF27Q86VH2 1401 aa11.05□□□□□ -0.64
SCML1-203ENST00000380045 CLSPNQ9HAW4 1339 aa11.05□□□□□ -0.64
SCML1-203ENST00000380045 ARHGAP35Q9NRY4 1499 aa11.05□□□□□ -0.64
SCML1-203ENST00000380045 TSHZ2Q9NRE2 1034 aa11.04□□□□□ -0.64
SCML1-203ENST00000380045 FKBP8Q14318 412 aa11.03□□□□□ -0.64
SCML1-203ENST00000380045 RRBP1Q9P2E9 1410 aaKnown RBP11.02□□□□□ -0.64
SCML1-203ENST00000380045 CC2D2AQ9P2K1 1620 aa11.02□□□□□ -0.65
SCML1-203ENST00000380045 CUX2O14529 1486 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms