RNA–Protein interactions for RNA: ENST00000575281.1

RFWD3-210, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 4

Gene RFWD3, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-210ENST00000575281 CHIC1Q5VXU3 224 aa12.31□□□□□ -0.44
RFWD3-210ENST00000575281 AEBP2Q6ZN18 517 aaPredicted RBP12.28□□□□□ -0.44
RFWD3-210ENST00000575281 NISCHQ9Y2I1 1504 aa12.04□□□□□ -0.48
RFWD3-210ENST00000575281 PHF23Q9BUL5 403 aaPredicted RBP10.8□□□□□ -0.68
RFWD3-210ENST00000575281 CCDC180Q9P1Z9 1646 aa10.62□□□□□ -0.71
RFWD3-210ENST00000575281 SENP3Q9H4L4 574 aaPredicted RBP10.49□□□□□ -0.73
RFWD3-210ENST00000575281 ABCC9O60706 1549 aa10.38□□□□□ -0.75
RFWD3-210ENST00000575281 PLPPR3Q6T4P5 718 aa10.16□□□□□ -0.78
RFWD3-210ENST00000575281 ZCCHC6Q5VYS8 1495 aaKnown RBP10.07□□□□□ -0.8
RFWD3-210ENST00000575281 DCAF8L2P0C7V8 631 aa9.97□□□□□ -0.81
RFWD3-210ENST00000575281 NACADO15069 1562 aa9.95□□□□□ -0.82
RFWD3-210ENST00000575281 RB1CC1Q8TDY2 1594 aa9.93□□□□□ -0.82
RFWD3-210ENST00000575281 DCAF1Q9Y4B6 1507 aa9.92□□□□□ -0.82
RFWD3-210ENST00000575281 MYO15BQ96JP2 1530 aa9.92□□□□□ -0.82
RFWD3-210ENST00000575281 UNC13AQ9UPW8 1703 aa9.78□□□□□ -0.84
RFWD3-210ENST00000575281 SCRIBQ14160 1630 aa9.76□□□□□ -0.85
RFWD3-210ENST00000575281 BICRAQ9NZM4 1560 aa9.75□□□□□ -0.85
RFWD3-210ENST00000575281 PABPN1Q86U42 306 aaKnown RBP eCLIP9.71□□□□□ -0.86
RFWD3-210ENST00000575281 FOXD1Q16676 465 aa9.63□□□□□ -0.87
RFWD3-210ENST00000575281 SHROOM4Q9ULL8 1493 aa9.6□□□□□ -0.87
RFWD3-210ENST00000575281 DNAJC5BQ9UF47 199 aa9.5□□□□□ -0.89
RFWD3-210ENST00000575281 ADRA2BP18089 450 aa9.46□□□□□ -0.9
RFWD3-210ENST00000575281 PPP6R1Q9UPN7 881 aa9.44□□□□□ -0.9
RFWD3-210ENST00000575281 EIF4G1Q04637 1599 aaKnown RBP9.43□□□□□ -0.9
RFWD3-210ENST00000575281 CECR2Q9BXF3 1484 aa9.43□□□□□ -0.9
RFWD3-210ENST00000575281 CC2D2AQ9P2K1 1620 aa9.38□□□□□ -0.91
RFWD3-210ENST00000575281 MROH2BQ7Z745 1585 aa9.33□□□□□ -0.92
RFWD3-210ENST00000575281 SMARCA4P51532 1647 aa9.32□□□□□ -0.92
RFWD3-210ENST00000575281 BAZ1AQ9NRL2 1556 aaPredicted RBP9.29□□□□□ -0.92
RFWD3-210ENST00000575281 ATAD2BQ9ULI0 1458 aa9.26□□□□□ -0.93
RFWD3-210ENST00000575281 RSF1Q96T23 1441 aaPredicted RBP9.22□□□□□ -0.93
RFWD3-210ENST00000575281 PEG3Q9GZU2 1588 aa9.22□□□□□ -0.93
RFWD3-210ENST00000575281 NCAPD3P42695 1498 aa9.21□□□□□ -0.93
RFWD3-210ENST00000575281 WIZO95785 1651 aa9.21□□□□□ -0.93
RFWD3-210ENST00000575281 SMARCA2P51531 1590 aa9.19□□□□□ -0.94
RFWD3-210ENST00000575281 PIAS4Q8N2W9 510 aaPredicted RBP9.18□□□□□ -0.94
RFWD3-210ENST00000575281 HMGXB3Q12766 1538 aa9.17□□□□□ -0.94
RFWD3-210ENST00000575281 BAZ1BQ9UIG0 1483 aaKnown RBP9.15□□□□□ -0.95
RFWD3-210ENST00000575281 TOP2AP11388 1531 aaKnown RBP9.09□□□□□ -0.95
RFWD3-210ENST00000575281 NESP48681 1621 aa9.04□□□□□ -0.96
RFWD3-210ENST00000575281 SUPT5HO00267 1087 aaKnown RBP9.02□□□□□ -0.97
RFWD3-210ENST00000575281 CCDC88BA6NC98 1476 aa9□□□□□ -0.97
RFWD3-210ENST00000575281 KCNA4P22459 653 aa8.99□□□□□ -0.97
RFWD3-210ENST00000575281 PPP4R3CPQ6ZMV5 832 aa8.95□□□□□ -0.98
RFWD3-210ENST00000575281 CADPSQ9ULU8 1353 aa8.94□□□□□ -0.98
RFWD3-210ENST00000575281 CFTRP13569 1480 aa8.93□□□□□ -0.98
RFWD3-210ENST00000575281 LAMC3Q9Y6N6 1575 aa8.93□□□□□ -0.98
RFWD3-210ENST00000575281 KIF21AQ7Z4S6 1674 aa8.89□□□□□ -0.99
RFWD3-210ENST00000575281 NCBP3Q53F19 620 aaKnown RBP8.87□□□□□ -0.99
RFWD3-210ENST00000575281 THOC2Q8NI27 1593 aaKnown RBP8.86□□□□□ -0.99
RFWD3-210ENST00000575281 ERCC6Q03468 1493 aa8.86□□□□□ -0.99
RFWD3-210ENST00000575281 MSH5O43196 834 aa8.86□□□□□ -0.99
RFWD3-210ENST00000575281 FANCD2Q9BXW9 1451 aa8.85□□□□□ -0.99
RFWD3-210ENST00000575281 PDS5BQ9NTI5 1447 aa8.84□□□□□ -0.99
RFWD3-210ENST00000575281 PRDM2Q13029 1718 aa8.82□□□□□ -1
RFWD3-210ENST00000575281 CEP164Q9UPV0 1460 aa8.81□□□□□ -1
RFWD3-210ENST00000575281 URB2Q14146 1524 aaKnown RBP8.8□□□□□ -1
RFWD3-210ENST00000575281 MRC2Q9UBG0 1479 aa8.8□□□□□ -1
RFWD3-210ENST00000575281 SCAF1Q9H7N4 1312 aaKnown RBP8.8□□□□□ -1
RFWD3-210ENST00000575281 WDR62O43379 1518 aa8.79□□□□□ -1
RFWD3-210ENST00000575281 CUX2O14529 1486 aa8.74□□□□□ -1.01
RFWD3-210ENST00000575281 TOPBP1Q92547 1522 aa8.74□□□□□ -1.01
RFWD3-210ENST00000575281 ABCC8Q09428 1581 aa8.73□□□□□ -1.01
RFWD3-210ENST00000575281 CUX1P39880 1505 aa8.73□□□□□ -1.01
RFWD3-210ENST00000575281 DNMBPQ6XZF7 1577 aa8.71□□□□□ -1.02
RFWD3-210ENST00000575281 SYNJ1O43426 1573 aa8.69□□□□□ -1.02
RFWD3-210ENST00000575281 CNKSR2Q8WXI2 1034 aa8.68□□□□□ -1.02
RFWD3-210ENST00000575281 POLA1P09884 1462 aaPredicted RBP8.68□□□□□ -1.02
RFWD3-210ENST00000575281 FGD5Q6ZNL6 1462 aa8.67□□□□□ -1.02
RFWD3-210ENST00000575281 RAD54L2Q9Y4B4 1467 aa8.66□□□□□ -1.02
RFWD3-210ENST00000575281 WRNQ14191 1432 aaPredicted RBP eCLIP8.66□□□□□ -1.02
RFWD3-210ENST00000575281 EHMT2Q96KQ7 1210 aa8.66□□□□□ -1.02
RFWD3-210ENST00000575281 SLC4A1APQ9BWU0 796 aaKnown RBP8.66□□□□□ -1.02
RFWD3-210ENST00000575281 ZNF608Q9ULD9 1512 aaPredicted RBP8.65□□□□□ -1.02
RFWD3-210ENST00000575281 TARBP1Q13395 1621 aaKnown RBP8.65□□□□□ -1.03
RFWD3-210ENST00000575281 NPM3O75607 178 aaKnown RBP8.64□□□□□ -1.03
RFWD3-210ENST00000575281 TOP2BQ02880 1626 aa8.64□□□□□ -1.03
RFWD3-210ENST00000575281 BIVM-ERCC5R4GMW8 1640 aa8.64□□□□□ -1.03
RFWD3-210ENST00000575281 IFT140Q96RY7 1462 aa8.62□□□□□ -1.03
RFWD3-210ENST00000575281 WDR97A6NE52 1622 aa8.61□□□□□ -1.03
RFWD3-210ENST00000575281 SOGA1O94964 1423 aa8.6□□□□□ -1.03
RFWD3-210ENST00000575281 AQRO60306 1485 aaKnown RBP eCLIP8.59□□□□□ -1.033e-7■■■■□ 20.3
RFWD3-210ENST00000575281 EIF4G3O43432 1585 aaKnown RBP8.59□□□□□ -1.03
RFWD3-210ENST00000575281 TDRD9Q8NDG6 1382 aaKnown RBP8.58□□□□□ -1.04
RFWD3-210ENST00000575281 ABCA10Q8WWZ4 1543 aa8.57□□□□□ -1.04
RFWD3-210ENST00000575281 ABCA5Q8WWZ7 1642 aa8.54□□□□□ -1.04
RFWD3-210ENST00000575281 RUSC2Q8N2Y8 1516 aa8.51□□□□□ -1.05
RFWD3-210ENST00000575281 GAPVD1Q14C86 1478 aa8.51□□□□□ -1.05
RFWD3-210ENST00000575281 SNAPC4Q5SXM2 1469 aa8.51□□□□□ -1.05
RFWD3-210ENST00000575281 PBRM1Q86U86 1689 aa8.49□□□□□ -1.05
RFWD3-210ENST00000575281 MAPK8IP2Q13387 824 aaPredicted RBP8.49□□□□□ -1.05
RFWD3-210ENST00000575281 GRIN2BQ13224 1484 aa8.48□□□□□ -1.05
RFWD3-210ENST00000575281 TRIM41Q8WV44 630 aa8.47□□□□□ -1.05
RFWD3-210ENST00000575281 ADAMTS12P58397 1594 aa8.46□□□□□ -1.06
RFWD3-210ENST00000575281 CSRNP3Q8WYN3 585 aa8.45□□□□□ -1.06
RFWD3-210ENST00000575281 CHD1O14646 1710 aa8.45□□□□□ -1.06
RFWD3-210ENST00000575281 IGF1RP08069 1367 aa8.45□□□□□ -1.06
RFWD3-210ENST00000575281 MAGI1Q96QZ7 1491 aaPredicted RBP8.45□□□□□ -1.06
RFWD3-210ENST00000575281 RNF216Q9NWF9 866 aaPredicted RBP8.44□□□□□ -1.06
RFWD3-210ENST00000575281 KIF27Q86VH2 1401 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms