RNA–Protein interactions for RNA: ENST00000572610.1

RFWD3-205, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 1 (best)

Gene RFWD3, Length 572 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-205ENST00000572610 AEBP2Q6ZN18 517 aaPredicted RBP18.85■□□□□ 0.61
RFWD3-205ENST00000572610 CHIC1Q5VXU3 224 aa18.01■□□□□ 0.47
RFWD3-205ENST00000572610 NISCHQ9Y2I1 1504 aa17.74■□□□□ 0.43
RFWD3-205ENST00000572610 SENP3Q9H4L4 574 aaPredicted RBP16.16■□□□□ 0.18
RFWD3-205ENST00000572610 CCDC180Q9P1Z9 1646 aa16.02■□□□□ 0.16
RFWD3-205ENST00000572610 ABCC9O60706 1549 aa15.97■□□□□ 0.15
RFWD3-205ENST00000572610 PHF23Q9BUL5 403 aaPredicted RBP15.94■□□□□ 0.14
RFWD3-205ENST00000572610 RB1CC1Q8TDY2 1594 aa15.28■□□□□ 0.04
RFWD3-205ENST00000572610 NACADO15069 1562 aa15.16■□□□□ 0.02
RFWD3-205ENST00000572610 DCAF8L2P0C7V8 631 aa15.01□□□□□ -0.01
RFWD3-205ENST00000572610 FOXD1Q16676 465 aa15□□□□□ -0.01
RFWD3-205ENST00000572610 MYO15BQ96JP2 1530 aa14.95□□□□□ -0.02
RFWD3-205ENST00000572610 DNAJC5BQ9UF47 199 aa14.93□□□□□ -0.02
RFWD3-205ENST00000572610 UNC13AQ9UPW8 1703 aa14.84□□□□□ -0.03
RFWD3-205ENST00000572610 PABPN1Q86U42 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
RFWD3-205ENST00000572610 DCAF1Q9Y4B6 1507 aa14.71□□□□□ -0.05
RFWD3-205ENST00000572610 BICRAQ9NZM4 1560 aa14.71□□□□□ -0.05
RFWD3-205ENST00000572610 SHROOM4Q9ULL8 1493 aa14.69□□□□□ -0.06
RFWD3-205ENST00000572610 ZCCHC6Q5VYS8 1495 aaKnown RBP14.68□□□□□ -0.06
RFWD3-205ENST00000572610 SCRIBQ14160 1630 aa14.5□□□□□ -0.09
RFWD3-205ENST00000572610 PLPPR3Q6T4P5 718 aa14.46□□□□□ -0.09
RFWD3-205ENST00000572610 CC2D2AQ9P2K1 1620 aa14.45□□□□□ -0.1
RFWD3-205ENST00000572610 CECR2Q9BXF3 1484 aa14.44□□□□□ -0.1
RFWD3-205ENST00000572610 EIF4G1Q04637 1599 aaKnown RBP14.42□□□□□ -0.1
RFWD3-205ENST00000572610 MSH5O43196 834 aa14.08□□□□□ -0.16
RFWD3-205ENST00000572610 PIAS4Q8N2W9 510 aaPredicted RBP14.08□□□□□ -0.16
RFWD3-205ENST00000572610 PPP6R1Q9UPN7 881 aa14.05□□□□□ -0.16
RFWD3-205ENST00000572610 ADRA2BP18089 450 aa14.04□□□□□ -0.16
RFWD3-205ENST00000572610 NCAPD3P42695 1498 aa13.96□□□□□ -0.17
RFWD3-205ENST00000572610 POTEDQ86YR6 584 aa13.94□□□□□ -0.18
RFWD3-205ENST00000572610 SMARCA2P51531 1590 aa13.92□□□□□ -0.18
RFWD3-205ENST00000572610 CUX2O14529 1486 aa13.9□□□□□ -0.18
RFWD3-205ENST00000572610 ERCC6Q03468 1493 aa13.89□□□□□ -0.19
RFWD3-205ENST00000572610 DNAJC5Q9H3Z4 198 aa13.89□□□□□ -0.19
RFWD3-205ENST00000572610 HMGXB3Q12766 1538 aa13.88□□□□□ -0.19
RFWD3-205ENST00000572610 ATAD2BQ9ULI0 1458 aa13.87□□□□□ -0.19
RFWD3-205ENST00000572610 SMARCA4P51532 1647 aa13.86□□□□□ -0.19
RFWD3-205ENST00000572610 BAZ1AQ9NRL2 1556 aaPredicted RBP13.83□□□□□ -0.2
RFWD3-205ENST00000572610 BAZ1BQ9UIG0 1483 aaKnown RBP13.79□□□□□ -0.2
RFWD3-205ENST00000572610 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
RFWD3-205ENST00000572610 LAMC3Q9Y6N6 1575 aa13.7□□□□□ -0.22
RFWD3-205ENST00000572610 NESP48681 1621 aa13.65□□□□□ -0.22
RFWD3-205ENST00000572610 PDS5BQ9NTI5 1447 aa13.64□□□□□ -0.23
RFWD3-205ENST00000572610 MROH2BQ7Z745 1585 aa13.61□□□□□ -0.23
RFWD3-205ENST00000572610 THOC2Q8NI27 1593 aaKnown RBP13.59□□□□□ -0.23
RFWD3-205ENST00000572610 KIF21AQ7Z4S6 1674 aa13.54□□□□□ -0.24
RFWD3-205ENST00000572610 CADPSQ9ULU8 1353 aa13.53□□□□□ -0.24
RFWD3-205ENST00000572610 MRC2Q9UBG0 1479 aa13.47□□□□□ -0.25
RFWD3-205ENST00000572610 WIZO95785 1651 aa13.45□□□□□ -0.26
RFWD3-205ENST00000572610 WDR62O43379 1518 aa13.43□□□□□ -0.26
RFWD3-205ENST00000572610 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
RFWD3-205ENST00000572610 FANCD2Q9BXW9 1451 aa13.36□□□□□ -0.27
RFWD3-205ENST00000572610 CFTRP13569 1480 aa13.36□□□□□ -0.27
RFWD3-205ENST00000572610 TOP2AP11388 1531 aaKnown RBP13.34□□□□□ -0.27
RFWD3-205ENST00000572610 RSF1Q96T23 1441 aaPredicted RBP13.33□□□□□ -0.28
RFWD3-205ENST00000572610 PRDM2Q13029 1718 aa13.27□□□□□ -0.28
RFWD3-205ENST00000572610 OSCARQ8IYS5 282 aa13.24□□□□□ -0.29
RFWD3-205ENST00000572610 TRIM41Q8WV44 630 aa13.24□□□□□ -0.29
RFWD3-205ENST00000572610 URB2Q14146 1524 aaKnown RBP13.2□□□□□ -0.3
RFWD3-205ENST00000572610 ABCC8Q09428 1581 aa13.18□□□□□ -0.3
RFWD3-205ENST00000572610 IFT140Q96RY7 1462 aa13.16□□□□□ -0.3
RFWD3-205ENST00000572610 CCDC88BA6NC98 1476 aa13.15□□□□□ -0.3
RFWD3-205ENST00000572610 TOPBP1Q92547 1522 aa13.09□□□□□ -0.31
RFWD3-205ENST00000572610 DNMBPQ6XZF7 1577 aa13.07□□□□□ -0.32
RFWD3-205ENST00000572610 ZNF608Q9ULD9 1512 aaPredicted RBP13.03□□□□□ -0.32
RFWD3-205ENST00000572610 EIF4G3O43432 1585 aaKnown RBP13.02□□□□□ -0.33
RFWD3-205ENST00000572610 RIMBP3CA6NJZ7 1639 aa13.01□□□□□ -0.33
RFWD3-205ENST00000572610 RIMBP3BA6NNM3 1639 aa13.01□□□□□ -0.33
RFWD3-205ENST00000572610 RIMBP3Q9UFD9 1639 aa13.01□□□□□ -0.33
RFWD3-205ENST00000572610 ARHGEF11O15085 1522 aa12.98□□□□□ -0.33
RFWD3-205ENST00000572610 TARBP1Q13395 1621 aaKnown RBP12.97□□□□□ -0.33
RFWD3-205ENST00000572610 WDR97A6NE52 1622 aa12.96□□□□□ -0.33
RFWD3-205ENST00000572610 POLA1P09884 1462 aaPredicted RBP12.95□□□□□ -0.34
RFWD3-205ENST00000572610 CHD1O14646 1710 aa12.93□□□□□ -0.34
RFWD3-205ENST00000572610 SCAF1Q9H7N4 1312 aaKnown RBP12.93□□□□□ -0.34
RFWD3-205ENST00000572610 AQRO60306 1485 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■■□□ 18.3
RFWD3-205ENST00000572610 FBLN2P98095 1184 aa12.93□□□□□ -0.34
RFWD3-205ENST00000572610 SOGA1O94964 1423 aa12.92□□□□□ -0.34
RFWD3-205ENST00000572610 CYB5RLQ6IPT4 315 aa12.88□□□□□ -0.35
RFWD3-205ENST00000572610 MAGI1Q96QZ7 1491 aaPredicted RBP12.86□□□□□ -0.35
RFWD3-205ENST00000572610 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
RFWD3-205ENST00000572610 FGD5Q6ZNL6 1462 aa12.85□□□□□ -0.35
RFWD3-205ENST00000572610 RAD54L2Q9Y4B4 1467 aa12.85□□□□□ -0.35
RFWD3-205ENST00000572610 TDRD9Q8NDG6 1382 aaKnown RBP12.85□□□□□ -0.35
RFWD3-205ENST00000572610 CHMP7Q8WUX9 453 aaPredicted RBP12.85□□□□□ -0.35
RFWD3-205ENST00000572610 SYNJ1O43426 1573 aa12.85□□□□□ -0.35
RFWD3-205ENST00000572610 GRIN2BQ13224 1484 aa12.84□□□□□ -0.35
RFWD3-205ENST00000572610 SNAPC4Q5SXM2 1469 aa12.83□□□□□ -0.36
RFWD3-205ENST00000572610 ARAP1Q96P48 1450 aa12.81□□□□□ -0.36
RFWD3-205ENST00000572610 TRHP20396 242 aaPredicted RBP12.81□□□□□ -0.36
RFWD3-205ENST00000572610 CUX1P39880 1505 aa12.81□□□□□ -0.36
RFWD3-205ENST00000572610 SYNJ2O15056 1496 aa12.8□□□□□ -0.36
RFWD3-205ENST00000572610 DMRT2Q9Y5R5 561 aa12.8□□□□□ -0.36
RFWD3-205ENST00000572610 CLASP1Q7Z460 1538 aa12.78□□□□□ -0.36
RFWD3-205ENST00000572610 GAPVD1Q14C86 1478 aa12.77□□□□□ -0.37
RFWD3-205ENST00000572610 PBRM1Q86U86 1689 aa12.76□□□□□ -0.37
RFWD3-205ENST00000572610 ABCA10Q8WWZ4 1543 aa12.74□□□□□ -0.37
RFWD3-205ENST00000572610 WRNQ14191 1432 aaPredicted RBP eCLIP12.71□□□□□ -0.37
RFWD3-205ENST00000572610 ABCA5Q8WWZ7 1642 aa12.7□□□□□ -0.38
RFWD3-205ENST00000572610 SUPT5HO00267 1087 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms