RNA–Protein interactions for RNA: ENST00000380043.7

SCML1-202, Transcript of Scm polycomb group protein like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCML1, Length 2,830 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1-202ENST00000380043 NISCHQ9Y2I1 1504 aa23.01■■□□□ 1.27
SCML1-202ENST00000380043 CCDC180Q9P1Z9 1646 aa19.63■□□□□ 0.73
SCML1-202ENST00000380043 DCAF8L2P0C7V8 631 aa19.59■□□□□ 0.73
SCML1-202ENST00000380043 SHROOM4Q9ULL8 1493 aa19.58■□□□□ 0.73
SCML1-202ENST00000380043 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
SCML1-202ENST00000380043 SUPT5HO00267 1087 aaKnown RBP18.98■□□□□ 0.63
SCML1-202ENST00000380043 ABCC9O60706 1549 aa18.92■□□□□ 0.62
SCML1-202ENST00000380043 DCAF1Q9Y4B6 1507 aa18.73■□□□□ 0.59
SCML1-202ENST00000380043 SCRIBQ14160 1630 aa18.56■□□□□ 0.56
SCML1-202ENST00000380043 MYO15BQ96JP2 1530 aa18.33■□□□□ 0.53
SCML1-202ENST00000380043 NACADO15069 1562 aa18.33■□□□□ 0.52
SCML1-202ENST00000380043 RB1CC1Q8TDY2 1594 aa18.17■□□□□ 0.5
SCML1-202ENST00000380043 CECR2Q9BXF3 1484 aa18.1■□□□□ 0.49
SCML1-202ENST00000380043 RSF1Q96T23 1441 aaPredicted RBP18.09■□□□□ 0.49
SCML1-202ENST00000380043 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.49
SCML1-202ENST00000380043 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.48
SCML1-202ENST00000380043 MROH2BQ7Z745 1585 aa17.94■□□□□ 0.46
SCML1-202ENST00000380043 UNC13AQ9UPW8 1703 aa17.88■□□□□ 0.45
SCML1-202ENST00000380043 WIZO95785 1651 aa17.81■□□□□ 0.44
SCML1-202ENST00000380043 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
SCML1-202ENST00000380043 BAZ1AQ9NRL2 1556 aaPredicted RBP17.69■□□□□ 0.42
SCML1-202ENST00000380043 LOC105371045A0A1W2PR82 267 aa17.65■□□□□ 0.42
SCML1-202ENST00000380043 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
SCML1-202ENST00000380043 FAM9AQ8IZU1 332 aaPredicted RBP17.61■□□□□ 0.41
SCML1-202ENST00000380043 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
SCML1-202ENST00000380043 EHMT2Q96KQ7 1210 aa17.6■□□□□ 0.41
SCML1-202ENST00000380043 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
SCML1-202ENST00000380043 TOP2AP11388 1531 aaKnown RBP17.43■□□□□ 0.38
SCML1-202ENST00000380043 SMARCA2P51531 1590 aa17.35■□□□□ 0.37
SCML1-202ENST00000380043 ATAD2BQ9ULI0 1458 aa17.32■□□□□ 0.36
SCML1-202ENST00000380043 ABCC8Q09428 1581 aa17.31■□□□□ 0.36
SCML1-202ENST00000380043 BAZ1BQ9UIG0 1483 aaKnown RBP17.27■□□□□ 0.35
SCML1-202ENST00000380043 EIF4G1Q04637 1599 aaKnown RBP17.22■□□□□ 0.35
SCML1-202ENST00000380043 PEG3Q9GZU2 1588 aa17.2■□□□□ 0.34
SCML1-202ENST00000380043 PCGF6Q9BYE7 350 aa17.15■□□□□ 0.34
SCML1-202ENST00000380043 SOGA1O94964 1423 aa17.07■□□□□ 0.32
SCML1-202ENST00000380043 RUSC2Q8N2Y8 1516 aa17.02■□□□□ 0.31
SCML1-202ENST00000380043 WRNQ14191 1432 aaPredicted RBP eCLIP17.02■□□□□ 0.31
SCML1-202ENST00000380043 NCAPD3P42695 1498 aa17.01■□□□□ 0.31
SCML1-202ENST00000380043 PPARGC1BQ86YN6 1023 aaKnown RBP17.01■□□□□ 0.31
SCML1-202ENST00000380043 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
SCML1-202ENST00000380043 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
SCML1-202ENST00000380043 CC2D2AQ9P2K1 1620 aa16.91■□□□□ 0.3
SCML1-202ENST00000380043 CSRNP3Q8WYN3 585 aa16.9■□□□□ 0.3
SCML1-202ENST00000380043 UBTFP17480 764 aaKnown RBP16.89■□□□□ 0.29
SCML1-202ENST00000380043 DNAJC5BQ9UF47 199 aa16.88■□□□□ 0.29
SCML1-202ENST00000380043 TTBK1Q5TCY1 1321 aaPredicted RBP16.87■□□□□ 0.29
SCML1-202ENST00000380043 RANGAP1P46060 587 aaPredicted RBP16.87■□□□□ 0.29
SCML1-202ENST00000380043 CFTRP13569 1480 aa16.77■□□□□ 0.27
SCML1-202ENST00000380043 TRIM26Q12899 539 aaPredicted RBP16.77■□□□□ 0.27
SCML1-202ENST00000380043 HRCP23327 699 aa16.76■□□□□ 0.27
SCML1-202ENST00000380043 CADPSQ9ULU8 1353 aa16.72■□□□□ 0.27
SCML1-202ENST00000380043 CEP162Q5TB80 1403 aa16.71■□□□□ 0.26
SCML1-202ENST00000380043 CUX1P39880 1505 aa16.7■□□□□ 0.26
SCML1-202ENST00000380043 NESP48681 1621 aa16.7■□□□□ 0.26
SCML1-202ENST00000380043 EEA1Q15075 1411 aa16.69■□□□□ 0.26
SCML1-202ENST00000380043 TOP2BQ02880 1626 aa16.68■□□□□ 0.26
SCML1-202ENST00000380043 TNIKQ9UKE5 1360 aa16.64■□□□□ 0.25
SCML1-202ENST00000380043 GOLGA3Q08378 1498 aa16.64■□□□□ 0.25
SCML1-202ENST00000380043 RAPGEF2Q9Y4G8 1499 aa16.64■□□□□ 0.25
SCML1-202ENST00000380043 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.25
SCML1-202ENST00000380043 BIVM-ERCC5R4GMW8 1640 aa16.58■□□□□ 0.25
SCML1-202ENST00000380043 FANCD2Q9BXW9 1451 aa16.57■□□□□ 0.24
SCML1-202ENST00000380043 CUX2O14529 1486 aa16.51■□□□□ 0.23
SCML1-202ENST00000380043 KIF27Q86VH2 1401 aa16.51■□□□□ 0.23
SCML1-202ENST00000380043 FGD5Q6ZNL6 1462 aa16.51■□□□□ 0.23
SCML1-202ENST00000380043 CLIP1P30622 1438 aa16.5■□□□□ 0.23
SCML1-202ENST00000380043 KIF21BO75037 1637 aa16.48■□□□□ 0.23
SCML1-202ENST00000380043 RAD54L2Q9Y4B4 1467 aa16.47■□□□□ 0.23
SCML1-202ENST00000380043 PRDM2Q13029 1718 aa16.44■□□□□ 0.22
SCML1-202ENST00000380043 PRXQ9BXM0 1461 aa16.43■□□□□ 0.22
SCML1-202ENST00000380043 IGF1RP08069 1367 aa16.41■□□□□ 0.22
SCML1-202ENST00000380043 TOPBP1Q92547 1522 aa16.39■□□□□ 0.21
SCML1-202ENST00000380043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.37■□□□□ 0.21
SCML1-202ENST00000380043 POLA1P09884 1462 aaPredicted RBP16.37■□□□□ 0.21
SCML1-202ENST00000380043 TDRD9Q8NDG6 1382 aaKnown RBP16.35■□□□□ 0.21
SCML1-202ENST00000380043 URB2Q14146 1524 aaKnown RBP16.35■□□□□ 0.21
SCML1-202ENST00000380043 APLP2Q06481 763 aa16.35■□□□□ 0.21
SCML1-202ENST00000380043 CARMIL1Q5VZK9 1371 aa16.34■□□□□ 0.21
SCML1-202ENST00000380043 P3H3Q8IVL6 736 aa16.34■□□□□ 0.21
SCML1-202ENST00000380043 LAMC3Q9Y6N6 1575 aa16.33■□□□□ 0.2
SCML1-202ENST00000380043 PDS5BQ9NTI5 1447 aa16.32■□□□□ 0.2
SCML1-202ENST00000380043 DNMBPQ6XZF7 1577 aa16.32■□□□□ 0.2
SCML1-202ENST00000380043 VPS8Q8N3P4 1428 aa16.31■□□□□ 0.2
SCML1-202ENST00000380043 ERICH3Q5RHP9 1530 aa16.3■□□□□ 0.2
SCML1-202ENST00000380043 KIF21AQ7Z4S6 1674 aa16.28■□□□□ 0.2
SCML1-202ENST00000380043 HNRNPUL2Q1KMD3 747 aaKnown RBP16.27■□□□□ 0.2
SCML1-202ENST00000380043 ARAP1Q96P48 1450 aa16.27■□□□□ 0.2
SCML1-202ENST00000380043 ATP1B4Q9UN42 357 aaPredicted RBP16.25■□□□□ 0.19
SCML1-202ENST00000380043 KANK4Q5T7N3 995 aaPredicted RBP16.24■□□□□ 0.19
SCML1-202ENST00000380043 CCER1Q8TC90 406 aaPredicted RBP16.23■□□□□ 0.19
SCML1-202ENST00000380043 ABCA10Q8WWZ4 1543 aa16.23■□□□□ 0.19
SCML1-202ENST00000380043 ARHGAP35Q9NRY4 1499 aa16.21■□□□□ 0.18
SCML1-202ENST00000380043 AQRO60306 1485 aaKnown RBP eCLIP16.15■□□□□ 0.189e-8■□□□□ 10.6
SCML1-202ENST00000380043 GAPVD1Q14C86 1478 aa16.14■□□□□ 0.17
SCML1-202ENST00000380043 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
SCML1-202ENST00000380043 FHOD3Q2V2M9 1422 aa16.1■□□□□ 0.17
SCML1-202ENST00000380043 ITGAEP38570 1179 aa16.1■□□□□ 0.17
SCML1-202ENST00000380043 MRC2Q9UBG0 1479 aa16.08■□□□□ 0.16
SCML1-202ENST00000380043 ZEB1P37275 1124 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms