RNA–Protein interactions for RNA: ENST00000579618.1

SNRPD1-203, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 5 BASIC

Gene SNRPD1, Length 320 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-203ENST00000579618 NISCHQ9Y2I1 1504 aa25.63■■□□□ 1.69
SNRPD1-203ENST00000579618 ABCC9O60706 1549 aa23.79■■□□□ 1.4
SNRPD1-203ENST00000579618 CCDC180Q9P1Z9 1646 aa23.28■■□□□ 1.32
SNRPD1-203ENST00000579618 DNAJC5BQ9UF47 199 aa22.75■■□□□ 1.23
SNRPD1-203ENST00000579618 RB1CC1Q8TDY2 1594 aa22.38■■□□□ 1.17
SNRPD1-203ENST00000579618 NACADO15069 1562 aa22.07■■□□□ 1.12
SNRPD1-203ENST00000579618 PABPN1Q86U42 306 aaKnown RBP eCLIP22■■□□□ 1.11
SNRPD1-203ENST00000579618 UNC13AQ9UPW8 1703 aa21.99■■□□□ 1.11
SNRPD1-203ENST00000579618 BICRAQ9NZM4 1560 aa21.81■■□□□ 1.08
SNRPD1-203ENST00000579618 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
SNRPD1-203ENST00000579618 MYO15BQ96JP2 1530 aa21.56■■□□□ 1.04
SNRPD1-203ENST00000579618 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
SNRPD1-203ENST00000579618 CECR2Q9BXF3 1484 aa21.45■■□□□ 1.03
SNRPD1-203ENST00000579618 SHROOM4Q9ULL8 1493 aa21.36■■□□□ 1.01
SNRPD1-203ENST00000579618 EIF4G1Q04637 1599 aaKnown RBP21.29■■□□□ 1
SNRPD1-203ENST00000579618 DNAJC5Q9H3Z4 198 aa21.22■□□□□ 0.99
SNRPD1-203ENST00000579618 SCRIBQ14160 1630 aa21.21■□□□□ 0.99
SNRPD1-203ENST00000579618 ZCCHC6Q5VYS8 1495 aaKnown RBP21.16■□□□□ 0.98
SNRPD1-203ENST00000579618 DCAF1Q9Y4B6 1507 aa21.11■□□□□ 0.97
SNRPD1-203ENST00000579618 CUX2O14529 1486 aa20.68■□□□□ 0.9
SNRPD1-203ENST00000579618 ERCC6Q03468 1493 aa20.53■□□□□ 0.88
SNRPD1-203ENST00000579618 NCAPD3P42695 1498 aa20.37■□□□□ 0.85
SNRPD1-203ENST00000579618 NESP48681 1621 aa20.31■□□□□ 0.84
SNRPD1-203ENST00000579618 ATAD2BQ9ULI0 1458 aa20.26■□□□□ 0.83
SNRPD1-203ENST00000579618 THOC2Q8NI27 1593 aaKnown RBP20.25■□□□□ 0.83
SNRPD1-203ENST00000579618 HMGXB3Q12766 1538 aa20.22■□□□□ 0.83
SNRPD1-203ENST00000579618 SMARCA2P51531 1590 aa20.17■□□□□ 0.82
SNRPD1-203ENST00000579618 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
SNRPD1-203ENST00000579618 TRIM41Q8WV44 630 aa20.11■□□□□ 0.81
SNRPD1-203ENST00000579618 KIF21AQ7Z4S6 1674 aa20.07■□□□□ 0.8
SNRPD1-203ENST00000579618 BAZ1BQ9UIG0 1483 aaKnown RBP20.04■□□□□ 0.8
SNRPD1-203ENST00000579618 LAMC3Q9Y6N6 1575 aa20.04■□□□□ 0.8
SNRPD1-203ENST00000579618 PEG3Q9GZU2 1588 aa19.93■□□□□ 0.78
SNRPD1-203ENST00000579618 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
SNRPD1-203ENST00000579618 PDS5BQ9NTI5 1447 aa19.87■□□□□ 0.77
SNRPD1-203ENST00000579618 MRC2Q9UBG0 1479 aa19.79■□□□□ 0.76
SNRPD1-203ENST00000579618 WDR62O43379 1518 aa19.79■□□□□ 0.76
SNRPD1-203ENST00000579618 MROH2BQ7Z745 1585 aa19.77■□□□□ 0.76
SNRPD1-203ENST00000579618 CADPSQ9ULU8 1353 aa19.7■□□□□ 0.74
SNRPD1-203ENST00000579618 CEP164Q9UPV0 1460 aa19.6■□□□□ 0.73
SNRPD1-203ENST00000579618 OSCARQ8IYS5 282 aa19.55■□□□□ 0.72
SNRPD1-203ENST00000579618 WIZO95785 1651 aa19.55■□□□□ 0.72
SNRPD1-203ENST00000579618 RIMBP3CA6NJZ7 1639 aa19.53■□□□□ 0.72
SNRPD1-203ENST00000579618 RIMBP3BA6NNM3 1639 aa19.53■□□□□ 0.72
SNRPD1-203ENST00000579618 RIMBP3Q9UFD9 1639 aa19.53■□□□□ 0.72
SNRPD1-203ENST00000579618 FANCD2Q9BXW9 1451 aa19.53■□□□□ 0.72
SNRPD1-203ENST00000579618 URB2Q14146 1524 aaKnown RBP19.44■□□□□ 0.7
SNRPD1-203ENST00000579618 CFTRP13569 1480 aa19.4■□□□□ 0.7
SNRPD1-203ENST00000579618 ARHGEF11O15085 1522 aa19.37■□□□□ 0.69
SNRPD1-203ENST00000579618 ZNF608Q9ULD9 1512 aaPredicted RBP19.29■□□□□ 0.68
SNRPD1-203ENST00000579618 PRDM2Q13029 1718 aa19.27■□□□□ 0.68
SNRPD1-203ENST00000579618 TOP2AP11388 1531 aaKnown RBP19.22■□□□□ 0.67
SNRPD1-203ENST00000579618 IFT140Q96RY7 1462 aa19.21■□□□□ 0.67
SNRPD1-203ENST00000579618 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
SNRPD1-203ENST00000579618 CYB5RLQ6IPT4 315 aa19.17■□□□□ 0.66
SNRPD1-203ENST00000579618 CHD1O14646 1710 aa19.17■□□□□ 0.66
SNRPD1-203ENST00000579618 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
SNRPD1-203ENST00000579618 TRHP20396 242 aaPredicted RBP19.14■□□□□ 0.65
SNRPD1-203ENST00000579618 TOPBP1Q92547 1522 aa19.11■□□□□ 0.65
SNRPD1-203ENST00000579618 RSF1Q96T23 1441 aaPredicted RBP19.11■□□□□ 0.65
SNRPD1-203ENST00000579618 TARBP1Q13395 1621 aaKnown RBP19.02■□□□□ 0.64
SNRPD1-203ENST00000579618 AQRO60306 1485 aaKnown RBP eCLIP19.01■□□□□ 0.637e-8■■■■□ 19.3
SNRPD1-203ENST00000579618 DNMBPQ6XZF7 1577 aa19.01■□□□□ 0.63
SNRPD1-203ENST00000579618 CCDC88BA6NC98 1476 aa18.98■□□□□ 0.63
SNRPD1-203ENST00000579618 ABCC8Q09428 1581 aa18.95■□□□□ 0.62
SNRPD1-203ENST00000579618 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
SNRPD1-203ENST00000579618 FBLN2P98095 1184 aa18.93■□□□□ 0.62
SNRPD1-203ENST00000579618 CLASP1Q7Z460 1538 aa18.9■□□□□ 0.62
SNRPD1-203ENST00000579618 POLA1P09884 1462 aaPredicted RBP18.89■□□□□ 0.61
SNRPD1-203ENST00000579618 RAD54L2Q9Y4B4 1467 aa18.84■□□□□ 0.61
SNRPD1-203ENST00000579618 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
SNRPD1-203ENST00000579618 SYNJ1O43426 1573 aa18.8■□□□□ 0.6
SNRPD1-203ENST00000579618 TDRD9Q8NDG6 1382 aaKnown RBP18.79■□□□□ 0.6
SNRPD1-203ENST00000579618 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
SNRPD1-203ENST00000579618 SOGA1O94964 1423 aa18.74■□□□□ 0.59
SNRPD1-203ENST00000579618 MAGI1Q96QZ7 1491 aaPredicted RBP18.71■□□□□ 0.59
SNRPD1-203ENST00000579618 FGD5Q6ZNL6 1462 aa18.7■□□□□ 0.58
SNRPD1-203ENST00000579618 GAPVD1Q14C86 1478 aa18.69■□□□□ 0.58
SNRPD1-203ENST00000579618 CHMP7Q8WUX9 453 aaPredicted RBP18.68■□□□□ 0.58
SNRPD1-203ENST00000579618 SYNJ2O15056 1496 aa18.66■□□□□ 0.58
SNRPD1-203ENST00000579618 PBRM1Q86U86 1689 aa18.66■□□□□ 0.58
SNRPD1-203ENST00000579618 GRIN2BQ13224 1484 aa18.65■□□□□ 0.58
SNRPD1-203ENST00000579618 CUX1P39880 1505 aa18.61■□□□□ 0.57
SNRPD1-203ENST00000579618 ERCC6L2Q5T890 1561 aa18.6■□□□□ 0.57
SNRPD1-203ENST00000579618 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.55
SNRPD1-203ENST00000579618 KIF13AQ9H1H9 1805 aa18.51■□□□□ 0.55
SNRPD1-203ENST00000579618 CEP170Q5SW79 1584 aa18.47■□□□□ 0.55
SNRPD1-203ENST00000579618 GRIN2AQ12879 1464 aa18.45■□□□□ 0.54
SNRPD1-203ENST00000579618 ABCA10Q8WWZ4 1543 aa18.44■□□□□ 0.54
SNRPD1-203ENST00000579618 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
SNRPD1-203ENST00000579618 SHROOM2Q13796 1616 aa18.42■□□□□ 0.54
SNRPD1-203ENST00000579618 NUP160Q12769 1436 aa18.39■□□□□ 0.53
SNRPD1-203ENST00000579618 DIP2BQ9P265 1576 aa18.26■□□□□ 0.51
SNRPD1-203ENST00000579618 ABCC10Q5T3U5 1492 aa18.26■□□□□ 0.51
SNRPD1-203ENST00000579618 FHAD1B1AJZ9 1412 aa18.24■□□□□ 0.51
SNRPD1-203ENST00000579618 PRG4Q92954 1404 aaPredicted RBP18.23■□□□□ 0.51
SNRPD1-203ENST00000579618 KDM6BO15054 1643 aa18.23■□□□□ 0.51
SNRPD1-203ENST00000579618 KDM4FA0A1W2PPD8 638 aa18.23■□□□□ 0.51
SNRPD1-203ENST00000579618 ILDR1Q86SU0 546 aaPredicted RBP18.23■□□□□ 0.51
SNRPD1-203ENST00000579618 FAM69CQ0P6D2 419 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms