RNA–Protein interactions for RNA: ENST00000295408.8

MERTK-201, Transcript of MER proto-oncogene, tyrosine kinase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MERTK, Length 3,954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MERTK-201ENST00000295408 NISCHQ9Y2I1 1504 aa20.29■□□□□ 0.84
MERTK-201ENST00000295408 DCAF8L2P0C7V8 631 aa19.86■□□□□ 0.77
MERTK-201ENST00000295408 SUPT5HO00267 1087 aaKnown RBP19.36■□□□□ 0.69
MERTK-201ENST00000295408 SHROOM4Q9ULL8 1493 aa19.36■□□□□ 0.69
MERTK-201ENST00000295408 EHMT2Q96KQ7 1210 aa18.66■□□□□ 0.58
MERTK-201ENST00000295408 FAM9AQ8IZU1 332 aaPredicted RBP18.21■□□□□ 0.51
MERTK-201ENST00000295408 PCGF6Q9BYE7 350 aa18.19■□□□□ 0.5
MERTK-201ENST00000295408 TTBK1Q5TCY1 1321 aaPredicted RBP17.98■□□□□ 0.47
MERTK-201ENST00000295408 LOC105371045A0A1W2PR82 267 aa17.75■□□□□ 0.43
MERTK-201ENST00000295408 PPARGC1BQ86YN6 1023 aaKnown RBP17.72■□□□□ 0.43
MERTK-201ENST00000295408 TRIM41Q8WV44 630 aa17.71■□□□□ 0.43
MERTK-201ENST00000295408 CHIC1Q5VXU3 224 aa17.69■□□□□ 0.42
MERTK-201ENST00000295408 RANGAP1P46060 587 aaPredicted RBP17.62■□□□□ 0.41
MERTK-201ENST00000295408 HRCP23327 699 aa17.39■□□□□ 0.37
MERTK-201ENST00000295408 CCER1Q8TC90 406 aaPredicted RBP17.32■□□□□ 0.36
MERTK-201ENST00000295408 UBTFP17480 764 aaKnown RBP17.29■□□□□ 0.36
MERTK-201ENST00000295408 APLP2Q06481 763 aa17.28■□□□□ 0.36
MERTK-201ENST00000295408 TRIM26Q12899 539 aaPredicted RBP17.23■□□□□ 0.35
MERTK-201ENST00000295408 ABCC9O60706 1549 aa17.1■□□□□ 0.33
MERTK-201ENST00000295408 YTHDC1Q96MU7 727 aaKnown RBP17.05■□□□□ 0.32
MERTK-201ENST00000295408 ZEB1P37275 1124 aaPredicted RBP17.04■□□□□ 0.32
MERTK-201ENST00000295408 ATP1B4Q9UN42 357 aaPredicted RBP17.04■□□□□ 0.32
MERTK-201ENST00000295408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.02■□□□□ 0.32
MERTK-201ENST00000295408 PABPN1Q86U42 306 aaKnown RBP eCLIP16.98■□□□□ 0.31
MERTK-201ENST00000295408 HNRNPUL2Q1KMD3 747 aaKnown RBP16.92■□□□□ 0.3
MERTK-201ENST00000295408 ZCCHC6Q5VYS8 1495 aaKnown RBP16.91■□□□□ 0.3
MERTK-201ENST00000295408 MYO15BQ96JP2 1530 aa16.88■□□□□ 0.29
MERTK-201ENST00000295408 ITGAEP38570 1179 aa16.87■□□□□ 0.29
MERTK-201ENST00000295408 CENPBP07199 599 aaPredicted RBP16.8■□□□□ 0.28
MERTK-201ENST00000295408 SCRIBQ14160 1630 aa16.69■□□□□ 0.26
MERTK-201ENST00000295408 DIEXFQ68CQ4 756 aaKnown RBP16.58■□□□□ 0.24
MERTK-201ENST00000295408 PELP1Q8IZL8 1130 aaKnown RBP16.5■□□□□ 0.23
MERTK-201ENST00000295408 CNGB1Q14028 1251 aaPredicted RBP16.44■□□□□ 0.22
MERTK-201ENST00000295408 CCDC180Q9P1Z9 1646 aa16.44■□□□□ 0.22
MERTK-201ENST00000295408 CSRNP3Q8WYN3 585 aa16.41■□□□□ 0.22
MERTK-201ENST00000295408 RSF1Q96T23 1441 aaPredicted RBP16.38■□□□□ 0.21
MERTK-201ENST00000295408 DCAF1Q9Y4B6 1507 aa16.37■□□□□ 0.21
MERTK-201ENST00000295408 GTF3C3Q9Y5Q9 886 aa16.35■□□□□ 0.21
MERTK-201ENST00000295408 FAM50AQ14320 339 aaKnown RBP16.32■□□□□ 0.2
MERTK-201ENST00000295408 P3H3Q8IVL6 736 aa16.32■□□□□ 0.2
MERTK-201ENST00000295408 NEUROD1Q13562 356 aa16.29■□□□□ 0.2
MERTK-201ENST00000295408 POLR3GLQ9BT43 218 aa16.28■□□□□ 0.2
MERTK-201ENST00000295408 CECR2Q9BXF3 1484 aa16.22■□□□□ 0.19
MERTK-201ENST00000295408 ARID3CA6NKF2 412 aa16.2■□□□□ 0.18
MERTK-201ENST00000295408 ZNF316A6NFI3 1004 aaPredicted RBP16.19■□□□□ 0.18
MERTK-201ENST00000295408 NEFLP07196 543 aa16.19■□□□□ 0.18
MERTK-201ENST00000295408 BCANQ96GW7 911 aa16.15■□□□□ 0.18
MERTK-201ENST00000295408 ACIN1Q9UKV3 1341 aaKnown RBP16.14■□□□□ 0.17
MERTK-201ENST00000295408 SCAF1Q9H7N4 1312 aaKnown RBP16.1■□□□□ 0.17
MERTK-201ENST00000295408 RB1CC1Q8TDY2 1594 aa16.07■□□□□ 0.16
MERTK-201ENST00000295408 ERICH6Q7L0X2 663 aa16.04■□□□□ 0.16
MERTK-201ENST00000295408 TRIM52Q96A61 297 aa16.02■□□□□ 0.16
MERTK-201ENST00000295408 CEP162Q5TB80 1403 aa15.98■□□□□ 0.15
MERTK-201ENST00000295408 HIRIP3Q9BW71 556 aaPredicted RBP15.97■□□□□ 0.15
MERTK-201ENST00000295408 MIER1Q8N108 512 aa15.97■□□□□ 0.15
MERTK-201ENST00000295408 MROH2BQ7Z745 1585 aa15.95■□□□□ 0.14
MERTK-201ENST00000295408 ZNF326Q5BKZ1 582 aaKnown RBP15.94■□□□□ 0.14
MERTK-201ENST00000295408 SOGA1O94964 1423 aa15.94■□□□□ 0.14
MERTK-201ENST00000295408 FBLN2P98095 1184 aa15.93■□□□□ 0.14
MERTK-201ENST00000295408 CLIP1P30622 1438 aa15.9■□□□□ 0.14
MERTK-201ENST00000295408 MYT1LQ9UL68 1186 aa15.89■□□□□ 0.13
MERTK-201ENST00000295408 ABCC8Q09428 1581 aa15.88■□□□□ 0.13
MERTK-201ENST00000295408 DDX10Q13206 875 aaKnown RBP15.87■□□□□ 0.13
MERTK-201ENST00000295408 WRNQ14191 1432 aaPredicted RBP eCLIP15.83■□□□□ 0.12
MERTK-201ENST00000295408 CCDC88BA6NC98 1476 aa15.82■□□□□ 0.12
MERTK-201ENST00000295408 CHIC2Q9UKJ5 165 aa15.81■□□□□ 0.12
MERTK-201ENST00000295408 NACADO15069 1562 aa15.8■□□□□ 0.12
MERTK-201ENST00000295408 ANP32CO43423 234 aa15.79■□□□□ 0.12
MERTK-201ENST00000295408 WIZO95785 1651 aa15.77■□□□□ 0.11
MERTK-201ENST00000295408 ZNF777Q9ULD5 760 aaPredicted RBP15.76■□□□□ 0.11
MERTK-201ENST00000295408 GOLGA3Q08378 1498 aa15.74■□□□□ 0.11
MERTK-201ENST00000295408 TNIKQ9UKE5 1360 aa15.73■□□□□ 0.11
MERTK-201ENST00000295408 BAZ1AQ9NRL2 1556 aaPredicted RBP15.71■□□□□ 0.11
MERTK-201ENST00000295408 SENP3-EIF4A1A0A087X0R7 540 aa15.69■□□□□ 0.1
MERTK-201ENST00000295408 FKBP8Q14318 412 aa15.68■□□□□ 0.1
MERTK-201ENST00000295408 BAZ1BQ9UIG0 1483 aaKnown RBP15.67■□□□□ 0.1
MERTK-201ENST00000295408 RUSC2Q8N2Y8 1516 aa15.66■□□□□ 0.1
MERTK-201ENST00000295408 SIN3AQ96ST3 1273 aa15.65■□□□□ 0.1
MERTK-201ENST00000295408 KANK4Q5T7N3 995 aaPredicted RBP15.65■□□□□ 0.1
MERTK-201ENST00000295408 SLC4A1APQ9BWU0 796 aaKnown RBP15.63■□□□□ 0.09
MERTK-201ENST00000295408 TONSLQ96HA7 1378 aa15.62■□□□□ 0.09
MERTK-201ENST00000295408 IRX6P78412 446 aaPredicted RBP15.62■□□□□ 0.09
MERTK-201ENST00000295408 RRP7BPQ9NSQ0 103 aa15.61■□□□□ 0.09
MERTK-201ENST00000295408 EEA1Q15075 1411 aa15.6■□□□□ 0.09
MERTK-201ENST00000295408 HNRNPUQ00839 825 aaKnown RBP eCLIP15.6■□□□□ 0.093e-6■■■■□ 21.4
MERTK-201ENST00000295408 FAM9BQ8IZU0 186 aa15.58■□□□□ 0.09
MERTK-201ENST00000295408 CEP164Q9UPV0 1460 aa15.58■□□□□ 0.09
MERTK-201ENST00000295408 SALL2Q9Y467 1007 aaPredicted RBP15.55■□□□□ 0.08
MERTK-201ENST00000295408 MTUS2Q5JR59 1369 aa15.54■□□□□ 0.08
MERTK-201ENST00000295408 MYT1Q01538 1121 aa15.5■□□□□ 0.07
MERTK-201ENST00000295408 KIF27Q86VH2 1401 aa15.49■□□□□ 0.07
MERTK-201ENST00000295408 KDM2AQ9Y2K7 1162 aa15.46■□□□□ 0.06
MERTK-201ENST00000295408 CDK11AQ9UQ88 783 aaPredicted RBP15.44■□□□□ 0.06
MERTK-201ENST00000295408 VPS8Q8N3P4 1428 aa15.43■□□□□ 0.06
MERTK-201ENST00000295408 RAPGEF2Q9Y4G8 1499 aa15.43■□□□□ 0.06
MERTK-201ENST00000295408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.42■□□□□ 0.062e-6■■□□□ 13.3
MERTK-201ENST00000295408 CUX2O14529 1486 aa15.4■□□□□ 0.06
MERTK-201ENST00000295408 CCNB3Q8WWL7 1395 aa15.4■□□□□ 0.06
MERTK-201ENST00000295408 TOP2AP11388 1531 aaKnown RBP15.39■□□□□ 0.05
MERTK-201ENST00000295408 MRS2Q9HD23 443 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms