RNA–Protein interactions for RNA: ENST00000427362.2

SCML1-206, Transcript of Scm polycomb group protein like 1, humanhuman

TSL 5

Gene SCML1, Length 846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1-206ENST00000427362 AEBP2Q6ZN18 517 aaPredicted RBP31.02■■■□□ 2.56
SCML1-206ENST00000427362 CHIC1Q5VXU3 224 aa29.68■■■□□ 2.34
SCML1-206ENST00000427362 SENP3Q9H4L4 574 aaPredicted RBP26.41■■□□□ 1.82
SCML1-206ENST00000427362 PHF23Q9BUL5 403 aaPredicted RBP26.11■■□□□ 1.77
SCML1-206ENST00000427362 FOXD1Q16676 465 aa24.61■■□□□ 1.53
SCML1-206ENST00000427362 PLPPR3Q6T4P5 718 aa23.79■■□□□ 1.4
SCML1-206ENST00000427362 PPP6R1Q9UPN7 881 aa23.18■■□□□ 1.3
SCML1-206ENST00000427362 ADRA2BP18089 450 aa23.06■■□□□ 1.28
SCML1-206ENST00000427362 PIAS4Q8N2W9 510 aaPredicted RBP22.97■■□□□ 1.27
SCML1-206ENST00000427362 MSH5O43196 834 aa22.93■■□□□ 1.26
SCML1-206ENST00000427362 POTEDQ86YR6 584 aa22.02■■□□□ 1.12
SCML1-206ENST00000427362 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
SCML1-206ENST00000427362 MAPK8IP2Q13387 824 aaPredicted RBP21.13■□□□□ 0.97
SCML1-206ENST00000427362 DMRT2Q9Y5R5 561 aa21.01■□□□□ 0.95
SCML1-206ENST00000427362 PPP4R3CPQ6ZMV5 832 aa20.87■□□□□ 0.93
SCML1-206ENST00000427362 CNKSR2Q8WXI2 1034 aa20.46■□□□□ 0.87
SCML1-206ENST00000427362 HOXD11P31277 338 aaPredicted RBP20.36■□□□□ 0.85
SCML1-206ENST00000427362 RNF216Q9NWF9 866 aaPredicted RBP20.23■□□□□ 0.83
SCML1-206ENST00000427362 NCBP3Q53F19 620 aaKnown RBP20.11■□□□□ 0.81
SCML1-206ENST00000427362 DCAF8L1A6NGE4 600 aa19.94■□□□□ 0.78
SCML1-206ENST00000427362 NPM3O75607 178 aaKnown RBP19.84■□□□□ 0.77
SCML1-206ENST00000427362 NISCHQ9Y2I1 1504 aa19.75■□□□□ 0.75
SCML1-206ENST00000427362 DNAJC5BQ9UF47 199 aa19.7■□□□□ 0.74
SCML1-206ENST00000427362 KCNA4P22459 653 aa19.62■□□□□ 0.73
SCML1-206ENST00000427362 RNF39Q9H2S5 420 aa19.61■□□□□ 0.73
SCML1-206ENST00000427362 CACNB1Q02641 598 aaPredicted RBP19.48■□□□□ 0.71
SCML1-206ENST00000427362 C1QBPQ07021 282 aaKnown RBP19.34■□□□□ 0.69
SCML1-206ENST00000427362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.25■□□□□ 0.673e-7■■■■□ 20.4
SCML1-206ENST00000427362 U3KPZ7 1027 aaPredicted RBP18.95■□□□□ 0.62
SCML1-206ENST00000427362 SLC4A2P04920 1241 aa18.93■□□□□ 0.62
SCML1-206ENST00000427362 SPINK5Q9NQ38 1064 aaPredicted RBP18.58■□□□□ 0.56
SCML1-206ENST00000427362 SLC4A1APQ9BWU0 796 aaKnown RBP18.55■□□□□ 0.56
SCML1-206ENST00000427362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.47■□□□□ 0.55
SCML1-206ENST00000427362 CAPN15O75808 1086 aa18.47■□□□□ 0.55
SCML1-206ENST00000427362 HNRNPUL2Q1KMD3 747 aaKnown RBP18.47■□□□□ 0.55
SCML1-206ENST00000427362 DSG3P32926 999 aa18.43■□□□□ 0.54
SCML1-206ENST00000427362 APLP2Q06481 763 aa18.42■□□□□ 0.54
SCML1-206ENST00000427362 SAMD1Q6SPF0 538 aaPredicted RBP18.37■□□□□ 0.53
SCML1-206ENST00000427362 MYCNP04198 464 aaPredicted RBP18.34■□□□□ 0.53
SCML1-206ENST00000427362 ZNF219Q9P2Y4 722 aaPredicted RBP18.27■□□□□ 0.52
SCML1-206ENST00000427362 FOXD4L1Q9NU39 408 aa18.26■□□□□ 0.51
SCML1-206ENST00000427362 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
SCML1-206ENST00000427362 ZBTB22O15209 634 aa18.06■□□□□ 0.48
SCML1-206ENST00000427362 ABCB7O75027 752 aa18.06■□□□□ 0.48
SCML1-206ENST00000427362 ATF5Q9Y2D1 282 aaPredicted RBP17.9■□□□□ 0.46
SCML1-206ENST00000427362 POLA2Q14181 598 aa17.85■□□□□ 0.45
SCML1-206ENST00000427362 ATXN8OSP0DMR3 200 aa17.75■□□□□ 0.43
SCML1-206ENST00000427362 RBM42Q9BTD8 480 aaKnown RBP17.55■□□□□ 0.4
SCML1-206ENST00000427362 ZBTB12Q9Y330 459 aaPredicted RBP17.52■□□□□ 0.4
SCML1-206ENST00000427362 CCDC180Q9P1Z9 1646 aa17.49■□□□□ 0.39
SCML1-206ENST00000427362 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
SCML1-206ENST00000427362 POTEHQ6S545 545 aa17.28■□□□□ 0.36
SCML1-206ENST00000427362 OSCARQ8IYS5 282 aa17.23■□□□□ 0.35
SCML1-206ENST00000427362 AKT1S1Q96B36 256 aa17.22■□□□□ 0.35
SCML1-206ENST00000427362 EHMT2Q96KQ7 1210 aa17.17■□□□□ 0.34
SCML1-206ENST00000427362 FBLN2P98095 1184 aa17.14■□□□□ 0.33
SCML1-206ENST00000427362 MKRN4PQ13434 485 aaPredicted RBP17.11■□□□□ 0.33
SCML1-206ENST00000427362 CHRDL2Q6WN34 429 aa17.07■□□□□ 0.32
SCML1-206ENST00000427362 REM2Q8IYK8 340 aaPredicted RBP17.03■□□□□ 0.32
SCML1-206ENST00000427362 SPDYE2BA6NHP3 402 aa17.02■□□□□ 0.32
SCML1-206ENST00000427362 SPDYE6P0CI01 402 aa17.02■□□□□ 0.32
SCML1-206ENST00000427362 SPDYE2Q495Y8 402 aa17.02■□□□□ 0.32
SCML1-206ENST00000427362 ABCC9O60706 1549 aa16.86■□□□□ 0.29
SCML1-206ENST00000427362 SSUH2Q9Y2M2 353 aa16.84■□□□□ 0.29
SCML1-206ENST00000427362 PITPNM1O00562 1244 aa16.83■□□□□ 0.28
SCML1-206ENST00000427362 ZNF692Q9BU19 519 aaPredicted RBP16.8■□□□□ 0.28
SCML1-206ENST00000427362 PIP4P2Q8N4L2 257 aa16.72■□□□□ 0.27
SCML1-206ENST00000427362 FXR2P51116 673 aaKnown RBP eCLIP16.71■□□□□ 0.27
SCML1-206ENST00000427362 SPDYE1Q8NFV5 336 aaPredicted RBP16.64■□□□□ 0.25
SCML1-206ENST00000427362 PABPN1Q86U42 306 aaKnown RBP eCLIP16.56■□□□□ 0.24
SCML1-206ENST00000427362 CLEC11AQ9Y240 323 aa16.52■□□□□ 0.24
SCML1-206ENST00000427362 ZCCHC6Q5VYS8 1495 aaKnown RBP16.48■□□□□ 0.23
SCML1-206ENST00000427362 MYO15BQ96JP2 1530 aa16.44■□□□□ 0.22
SCML1-206ENST00000427362 NACADO15069 1562 aa16.43■□□□□ 0.22
SCML1-206ENST00000427362 DCAF1Q9Y4B6 1507 aa16.41■□□□□ 0.22
SCML1-206ENST00000427362 DCAF8L2P0C7V8 631 aa16.41■□□□□ 0.22
SCML1-206ENST00000427362 RB1CC1Q8TDY2 1594 aa16.38■□□□□ 0.21
SCML1-206ENST00000427362 PRKAR2AP13861 404 aaKnown RBP16.38■□□□□ 0.21
SCML1-206ENST00000427362 SPDYE4A6NLX3 237 aa16.36■□□□□ 0.21
SCML1-206ENST00000427362 PRR29P0C7W0 189 aa16.33■□□□□ 0.2
SCML1-206ENST00000427362 HAX1O00165 279 aa16.3■□□□□ 0.2
SCML1-206ENST00000427362 SP7Q8TDD2 431 aaPredicted RBP16.3■□□□□ 0.2
SCML1-206ENST00000427362 CHADLQ6NUI6 762 aa16.22■□□□□ 0.19
SCML1-206ENST00000427362 EVX2Q03828 476 aa16.2■□□□□ 0.18
SCML1-206ENST00000427362 STAG3Q9UJ98 1225 aa16.2■□□□□ 0.18
SCML1-206ENST00000427362 C19orf67A6NJJ6 358 aa16.16■□□□□ 0.18
SCML1-206ENST00000427362 PROM2Q8N271 834 aa16.13■□□□□ 0.17
SCML1-206ENST00000427362 FARP1Q9Y4F1 1045 aaPredicted RBP16.05■□□□□ 0.16
SCML1-206ENST00000427362 CREBZFQ9NS37 354 aa16.02■□□□□ 0.16
SCML1-206ENST00000427362 UNC13AQ9UPW8 1703 aa15.91■□□□□ 0.14
SCML1-206ENST00000427362 SCRIBQ14160 1630 aa15.88■□□□□ 0.13
SCML1-206ENST00000427362 CD44P16070 742 aaKnown RBP15.86■□□□□ 0.13
SCML1-206ENST00000427362 GABBR2O75899 941 aa15.84■□□□□ 0.13
SCML1-206ENST00000427362 MNX1P50219 401 aaPredicted RBP15.83■□□□□ 0.12
SCML1-206ENST00000427362 SHROOM4Q9ULL8 1493 aa15.8■□□□□ 0.12
SCML1-206ENST00000427362 BICRAQ9NZM4 1560 aa15.79■□□□□ 0.12
SCML1-206ENST00000427362 CLCN6P51797 869 aa15.74■□□□□ 0.11
SCML1-206ENST00000427362 FKBP8Q14318 412 aa15.72■□□□□ 0.11
SCML1-206ENST00000427362 NPM1P06748 294 aaKnown RBP eCLIP15.7■□□□□ 0.1
SCML1-206ENST00000427362 ZNF579Q8NAF0 562 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms