RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 NISCHQ9Y2I1 1504 aa13.8□□□□□ -0.2
RPUSD4-204ENST00000530036 CCDC180Q9P1Z9 1646 aa12.29□□□□□ -0.44
RPUSD4-204ENST00000530036 ABCC9O60706 1549 aa11.83□□□□□ -0.52
RPUSD4-204ENST00000530036 ZCCHC6Q5VYS8 1495 aaKnown RBP11.53□□□□□ -0.56
RPUSD4-204ENST00000530036 NACADO15069 1562 aa11.49□□□□□ -0.57
RPUSD4-204ENST00000530036 RB1CC1Q8TDY2 1594 aa11.47□□□□□ -0.57
RPUSD4-204ENST00000530036 MYO15BQ96JP2 1530 aa11.47□□□□□ -0.57
RPUSD4-204ENST00000530036 DCAF1Q9Y4B6 1507 aa11.45□□□□□ -0.58
RPUSD4-204ENST00000530036 DCAF8L2P0C7V8 631 aa11.32□□□□□ -0.6
RPUSD4-204ENST00000530036 DNAJC5BQ9UF47 199 aa11.32□□□□□ -0.6
RPUSD4-204ENST00000530036 UNC13AQ9UPW8 1703 aa11.29□□□□□ -0.6
RPUSD4-204ENST00000530036 SCRIBQ14160 1630 aa11.15□□□□□ -0.62
RPUSD4-204ENST00000530036 BICRAQ9NZM4 1560 aa11.15□□□□□ -0.62
RPUSD4-204ENST00000530036 SHROOM4Q9ULL8 1493 aa11.06□□□□□ -0.64
RPUSD4-204ENST00000530036 PABPN1Q86U42 306 aaKnown RBP eCLIP11□□□□□ -0.65
RPUSD4-204ENST00000530036 DNAJC5Q9H3Z4 198 aa10.85□□□□□ -0.67
RPUSD4-204ENST00000530036 EIF4G1Q04637 1599 aaKnown RBP10.82□□□□□ -0.68
RPUSD4-204ENST00000530036 CC2D2AQ9P2K1 1620 aa10.76□□□□□ -0.69
RPUSD4-204ENST00000530036 SMARCA4P51532 1647 aa10.71□□□□□ -0.69
RPUSD4-204ENST00000530036 CECR2Q9BXF3 1484 aa10.71□□□□□ -0.69
RPUSD4-204ENST00000530036 BAZ1AQ9NRL2 1556 aaPredicted RBP10.69□□□□□ -0.7
RPUSD4-204ENST00000530036 PEG3Q9GZU2 1588 aa10.63□□□□□ -0.71
RPUSD4-204ENST00000530036 MROH2BQ7Z745 1585 aa10.62□□□□□ -0.71
RPUSD4-204ENST00000530036 SMARCA2P51531 1590 aa10.6□□□□□ -0.71
RPUSD4-204ENST00000530036 ATAD2BQ9ULI0 1458 aa10.59□□□□□ -0.71
RPUSD4-204ENST00000530036 HMGXB3Q12766 1538 aa10.58□□□□□ -0.72
RPUSD4-204ENST00000530036 NCAPD3P42695 1498 aa10.57□□□□□ -0.72
RPUSD4-204ENST00000530036 WIZO95785 1651 aa10.53□□□□□ -0.72
RPUSD4-204ENST00000530036 RSF1Q96T23 1441 aaPredicted RBP10.51□□□□□ -0.73
RPUSD4-204ENST00000530036 BAZ1BQ9UIG0 1483 aaKnown RBP10.5□□□□□ -0.73
RPUSD4-204ENST00000530036 TOP2AP11388 1531 aaKnown RBP10.43□□□□□ -0.74
RPUSD4-204ENST00000530036 LAMC3Q9Y6N6 1575 aa10.31□□□□□ -0.76
RPUSD4-204ENST00000530036 NESP48681 1621 aa10.28□□□□□ -0.76
RPUSD4-204ENST00000530036 PRDM2Q13029 1718 aa10.27□□□□□ -0.77
RPUSD4-204ENST00000530036 CCDC88BA6NC98 1476 aa10.26□□□□□ -0.77
RPUSD4-204ENST00000530036 CADPSQ9ULU8 1353 aa10.24□□□□□ -0.77
RPUSD4-204ENST00000530036 CFTRP13569 1480 aa10.23□□□□□ -0.77
RPUSD4-204ENST00000530036 KIF21AQ7Z4S6 1674 aa10.23□□□□□ -0.77
RPUSD4-204ENST00000530036 SUPT5HO00267 1087 aaKnown RBP10.21□□□□□ -0.77
RPUSD4-204ENST00000530036 TRIM41Q8WV44 630 aa10.2□□□□□ -0.78
RPUSD4-204ENST00000530036 PDS5BQ9NTI5 1447 aa10.18□□□□□ -0.78
RPUSD4-204ENST00000530036 THOC2Q8NI27 1593 aaKnown RBP10.18□□□□□ -0.78
RPUSD4-204ENST00000530036 ERCC6Q03468 1493 aa10.17□□□□□ -0.78
RPUSD4-204ENST00000530036 FANCD2Q9BXW9 1451 aa10.14□□□□□ -0.79
RPUSD4-204ENST00000530036 CEP164Q9UPV0 1460 aa10.13□□□□□ -0.79
RPUSD4-204ENST00000530036 WDR62O43379 1518 aa10.1□□□□□ -0.79
RPUSD4-204ENST00000530036 MRC2Q9UBG0 1479 aa10.1□□□□□ -0.79
RPUSD4-204ENST00000530036 CUX2O14529 1486 aa10.09□□□□□ -0.79
RPUSD4-204ENST00000530036 URB2Q14146 1524 aaKnown RBP10.05□□□□□ -0.8
RPUSD4-204ENST00000530036 DNMBPQ6XZF7 1577 aa10.02□□□□□ -0.81
RPUSD4-204ENST00000530036 TOPBP1Q92547 1522 aa10□□□□□ -0.81
RPUSD4-204ENST00000530036 ABCC8Q09428 1581 aa10□□□□□ -0.81
RPUSD4-204ENST00000530036 CUX1P39880 1505 aa9.97□□□□□ -0.81
RPUSD4-204ENST00000530036 BIVM-ERCC5R4GMW8 1640 aa9.95□□□□□ -0.82
RPUSD4-204ENST00000530036 POLA1P09884 1462 aaPredicted RBP9.93□□□□□ -0.82
RPUSD4-204ENST00000530036 TOP2BQ02880 1626 aa9.93□□□□□ -0.82
RPUSD4-204ENST00000530036 TARBP1Q13395 1621 aaKnown RBP9.93□□□□□ -0.82
RPUSD4-204ENST00000530036 SYNJ1O43426 1573 aa9.92□□□□□ -0.82
RPUSD4-204ENST00000530036 WDR97A6NE52 1622 aa9.91□□□□□ -0.82
RPUSD4-204ENST00000530036 FGD5Q6ZNL6 1462 aa9.91□□□□□ -0.82
RPUSD4-204ENST00000530036 IFT140Q96RY7 1462 aa9.91□□□□□ -0.82
RPUSD4-204ENST00000530036 WRNQ14191 1432 aaPredicted RBP eCLIP9.9□□□□□ -0.82
RPUSD4-204ENST00000530036 EIF4G3O43432 1585 aaKnown RBP9.87□□□□□ -0.83
RPUSD4-204ENST00000530036 ZNF608Q9ULD9 1512 aaPredicted RBP9.85□□□□□ -0.83
RPUSD4-204ENST00000530036 RAD54L2Q9Y4B4 1467 aa9.85□□□□□ -0.83
RPUSD4-204ENST00000530036 SOGA1O94964 1423 aa9.83□□□□□ -0.84
RPUSD4-204ENST00000530036 ABCA10Q8WWZ4 1543 aa9.83□□□□□ -0.84
RPUSD4-204ENST00000530036 ABCA5Q8WWZ7 1642 aa9.82□□□□□ -0.84
RPUSD4-204ENST00000530036 PBRM1Q86U86 1689 aa9.8□□□□□ -0.84
RPUSD4-204ENST00000530036 AEBP2Q6ZN18 517 aaPredicted RBP9.79□□□□□ -0.84
RPUSD4-204ENST00000530036 AQRO60306 1485 aaKnown RBP eCLIP9.78□□□□□ -0.84
RPUSD4-204ENST00000530036 TDRD9Q8NDG6 1382 aaKnown RBP9.75□□□□□ -0.85
RPUSD4-204ENST00000530036 GAPVD1Q14C86 1478 aa9.75□□□□□ -0.85
RPUSD4-204ENST00000530036 GRIN2BQ13224 1484 aa9.74□□□□□ -0.85
RPUSD4-204ENST00000530036 CHD1O14646 1710 aa9.73□□□□□ -0.85
RPUSD4-204ENST00000530036 SNAPC4Q5SXM2 1469 aa9.72□□□□□ -0.85
RPUSD4-204ENST00000530036 MAGI1Q96QZ7 1491 aaPredicted RBP9.72□□□□□ -0.85
RPUSD4-204ENST00000530036 ERICH3Q5RHP9 1530 aa9.72□□□□□ -0.85
RPUSD4-204ENST00000530036 ADAMTS12P58397 1594 aa9.71□□□□□ -0.85
RPUSD4-204ENST00000530036 SYNJ2O15056 1496 aa9.68□□□□□ -0.86
RPUSD4-204ENST00000530036 KIF27Q86VH2 1401 aa9.68□□□□□ -0.86
RPUSD4-204ENST00000530036 CUL7Q14999 1698 aa9.67□□□□□ -0.86
RPUSD4-204ENST00000530036 FHAD1B1AJZ9 1412 aa9.64□□□□□ -0.87
RPUSD4-204ENST00000530036 GRIN2AQ12879 1464 aa9.63□□□□□ -0.87
RPUSD4-204ENST00000530036 CLASP1Q7Z460 1538 aa9.62□□□□□ -0.87
RPUSD4-204ENST00000530036 RUSC2Q8N2Y8 1516 aa9.62□□□□□ -0.87
RPUSD4-204ENST00000530036 CHIC1Q5VXU3 224 aa9.62□□□□□ -0.87
RPUSD4-204ENST00000530036 IGF1RP08069 1367 aa9.62□□□□□ -0.87
RPUSD4-204ENST00000530036 CEP170Q5SW79 1584 aa9.6□□□□□ -0.87
RPUSD4-204ENST00000530036 NUP160Q12769 1436 aa9.59□□□□□ -0.87
RPUSD4-204ENST00000530036 OSCARQ8IYS5 282 aa9.59□□□□□ -0.87
RPUSD4-204ENST00000530036 CHMP7Q8WUX9 453 aaPredicted RBP9.58□□□□□ -0.88
RPUSD4-204ENST00000530036 EEA1Q15075 1411 aa9.57□□□□□ -0.88
RPUSD4-204ENST00000530036 FBLN2P98095 1184 aa9.57□□□□□ -0.88
RPUSD4-204ENST00000530036 CARMIL1Q5VZK9 1371 aa9.56□□□□□ -0.88
RPUSD4-204ENST00000530036 TRHP20396 242 aaPredicted RBP9.56□□□□□ -0.88
RPUSD4-204ENST00000530036 SHROOM2Q13796 1616 aa9.56□□□□□ -0.88
RPUSD4-204ENST00000530036 PRXQ9BXM0 1461 aa9.54□□□□□ -0.88
RPUSD4-204ENST00000530036 RAPGEF2Q9Y4G8 1499 aa9.54□□□□□ -0.88
RPUSD4-204ENST00000530036 RIMBP3CA6NJZ7 1639 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms