RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 AEBP2Q6ZN18 517 aaPredicted RBP30.26■■■□□ 2.43
SNRPD1-204ENST00000582475 CHIC1Q5VXU3 224 aa28.94■■■□□ 2.22
SNRPD1-204ENST00000582475 NISCHQ9Y2I1 1504 aa28.69■■■□□ 2.18
SNRPD1-204ENST00000582475 SENP3Q9H4L4 574 aaPredicted RBP25.76■■□□□ 1.71
SNRPD1-204ENST00000582475 PHF23Q9BUL5 403 aaPredicted RBP25.48■■□□□ 1.67
SNRPD1-204ENST00000582475 CCDC180Q9P1Z9 1646 aa25.3■■□□□ 1.64
SNRPD1-204ENST00000582475 ABCC9O60706 1549 aa24.71■■□□□ 1.55
SNRPD1-204ENST00000582475 DCAF8L2P0C7V8 631 aa24.09■■□□□ 1.45
SNRPD1-204ENST00000582475 FOXD1Q16676 465 aa24■■□□□ 1.43
SNRPD1-204ENST00000582475 ZCCHC6Q5VYS8 1495 aaKnown RBP23.9■■□□□ 1.42
SNRPD1-204ENST00000582475 NACADO15069 1562 aa23.83■■□□□ 1.41
SNRPD1-204ENST00000582475 RB1CC1Q8TDY2 1594 aa23.8■■□□□ 1.4
SNRPD1-204ENST00000582475 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
SNRPD1-204ENST00000582475 DCAF1Q9Y4B6 1507 aa23.71■■□□□ 1.39
SNRPD1-204ENST00000582475 PABPN1Q86U42 306 aaKnown RBP eCLIP23.23■■□□□ 1.31
SNRPD1-204ENST00000582475 PLPPR3Q6T4P5 718 aa23.22■■□□□ 1.31
SNRPD1-204ENST00000582475 UNC13AQ9UPW8 1703 aa23.19■■□□□ 1.3
SNRPD1-204ENST00000582475 SCRIBQ14160 1630 aa23.17■■□□□ 1.3
SNRPD1-204ENST00000582475 BICRAQ9NZM4 1560 aa23.06■■□□□ 1.28
SNRPD1-204ENST00000582475 SHROOM4Q9ULL8 1493 aa22.87■■□□□ 1.25
SNRPD1-204ENST00000582475 PPP6R1Q9UPN7 881 aa22.62■■□□□ 1.21
SNRPD1-204ENST00000582475 DNAJC5BQ9UF47 199 aa22.61■■□□□ 1.21
SNRPD1-204ENST00000582475 ADRA2BP18089 450 aa22.59■■□□□ 1.21
SNRPD1-204ENST00000582475 PIAS4Q8N2W9 510 aaPredicted RBP22.51■■□□□ 1.19
SNRPD1-204ENST00000582475 EIF4G1Q04637 1599 aaKnown RBP22.45■■□□□ 1.18
SNRPD1-204ENST00000582475 CECR2Q9BXF3 1484 aa22.36■■□□□ 1.17
SNRPD1-204ENST00000582475 MSH5O43196 834 aa22.36■■□□□ 1.17
SNRPD1-204ENST00000582475 CC2D2AQ9P2K1 1620 aa22.31■■□□□ 1.16
SNRPD1-204ENST00000582475 BAZ1AQ9NRL2 1556 aaPredicted RBP22.2■■□□□ 1.14
SNRPD1-204ENST00000582475 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
SNRPD1-204ENST00000582475 MROH2BQ7Z745 1585 aa22.12■■□□□ 1.13
SNRPD1-204ENST00000582475 ATAD2BQ9ULI0 1458 aa22.08■■□□□ 1.12
SNRPD1-204ENST00000582475 NCAPD3P42695 1498 aa22.03■■□□□ 1.12
SNRPD1-204ENST00000582475 SMARCA2P51531 1590 aa22.01■■□□□ 1.11
SNRPD1-204ENST00000582475 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
SNRPD1-204ENST00000582475 PEG3Q9GZU2 1588 aa21.94■■□□□ 1.1
SNRPD1-204ENST00000582475 BAZ1BQ9UIG0 1483 aaKnown RBP21.88■■□□□ 1.09
SNRPD1-204ENST00000582475 HMGXB3Q12766 1538 aa21.86■■□□□ 1.09
SNRPD1-204ENST00000582475 WIZO95785 1651 aa21.86■■□□□ 1.09
SNRPD1-204ENST00000582475 SUPT5HO00267 1087 aaKnown RBP21.68■■□□□ 1.06
SNRPD1-204ENST00000582475 TOP2AP11388 1531 aaKnown RBP21.63■■□□□ 1.05
SNRPD1-204ENST00000582475 POTEDQ86YR6 584 aa21.47■■□□□ 1.03
SNRPD1-204ENST00000582475 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.03
SNRPD1-204ENST00000582475 CADPSQ9ULU8 1353 aa21.44■■□□□ 1.02
SNRPD1-204ENST00000582475 NESP48681 1621 aa21.44■■□□□ 1.02
SNRPD1-204ENST00000582475 LAMC3Q9Y6N6 1575 aa21.36■■□□□ 1.01
SNRPD1-204ENST00000582475 CFTRP13569 1480 aa21.31■■□□□ 1
SNRPD1-204ENST00000582475 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
SNRPD1-204ENST00000582475 ERCC6Q03468 1493 aa21.28■■□□□ 1
SNRPD1-204ENST00000582475 FANCD2Q9BXW9 1451 aa21.14■□□□□ 0.98
SNRPD1-204ENST00000582475 KIF21AQ7Z4S6 1674 aa21.1■□□□□ 0.97
SNRPD1-204ENST00000582475 CEP164Q9UPV0 1460 aa21.08■□□□□ 0.97
SNRPD1-204ENST00000582475 PRDM2Q13029 1718 aa21.01■□□□□ 0.95
SNRPD1-204ENST00000582475 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
SNRPD1-204ENST00000582475 THOC2Q8NI27 1593 aaKnown RBP20.97■□□□□ 0.95
SNRPD1-204ENST00000582475 CUX2O14529 1486 aa20.95■□□□□ 0.94
SNRPD1-204ENST00000582475 URB2Q14146 1524 aaKnown RBP20.91■□□□□ 0.94
SNRPD1-204ENST00000582475 WDR62O43379 1518 aa20.89■□□□□ 0.94
SNRPD1-204ENST00000582475 ABCC8Q09428 1581 aa20.85■□□□□ 0.93
SNRPD1-204ENST00000582475 TOPBP1Q92547 1522 aa20.82■□□□□ 0.92
SNRPD1-204ENST00000582475 DNMBPQ6XZF7 1577 aa20.77■□□□□ 0.92
SNRPD1-204ENST00000582475 CUX1P39880 1505 aa20.73■□□□□ 0.91
SNRPD1-204ENST00000582475 WRNQ14191 1432 aaPredicted RBP eCLIP20.7■□□□□ 0.9
SNRPD1-204ENST00000582475 MAPK8IP2Q13387 824 aaPredicted RBP20.68■□□□□ 0.9
SNRPD1-204ENST00000582475 POLA1P09884 1462 aaPredicted RBP20.65■□□□□ 0.9
SNRPD1-204ENST00000582475 IFT140Q96RY7 1462 aa20.65■□□□□ 0.9
SNRPD1-204ENST00000582475 SOGA1O94964 1423 aa20.64■□□□□ 0.89
SNRPD1-204ENST00000582475 FGD5Q6ZNL6 1462 aa20.63■□□□□ 0.89
SNRPD1-204ENST00000582475 SCAF1Q9H7N4 1312 aaKnown RBP20.63■□□□□ 0.89
SNRPD1-204ENST00000582475 RAD54L2Q9Y4B4 1467 aa20.61■□□□□ 0.89
SNRPD1-204ENST00000582475 SYNJ1O43426 1573 aa20.57■□□□□ 0.88
SNRPD1-204ENST00000582475 TOP2BQ02880 1626 aa20.56■□□□□ 0.88
SNRPD1-204ENST00000582475 ZNF608Q9ULD9 1512 aaPredicted RBP20.54■□□□□ 0.88
SNRPD1-204ENST00000582475 BIVM-ERCC5R4GMW8 1640 aa20.53■□□□□ 0.88
SNRPD1-204ENST00000582475 TARBP1Q13395 1621 aaKnown RBP20.53■□□□□ 0.88
SNRPD1-204ENST00000582475 TDRD9Q8NDG6 1382 aaKnown RBP20.51■□□□□ 0.87
SNRPD1-204ENST00000582475 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.877e-8■■■■□ 19.3
SNRPD1-204ENST00000582475 TRIM41Q8WV44 630 aa20.47■□□□□ 0.87
SNRPD1-204ENST00000582475 DMRT2Q9Y5R5 561 aa20.46■□□□□ 0.87
SNRPD1-204ENST00000582475 ABCA10Q8WWZ4 1543 aa20.44■□□□□ 0.86
SNRPD1-204ENST00000582475 PPP4R3CPQ6ZMV5 832 aa20.4■□□□□ 0.86
SNRPD1-204ENST00000582475 EIF4G3O43432 1585 aaKnown RBP20.38■□□□□ 0.85
SNRPD1-204ENST00000582475 GAPVD1Q14C86 1478 aa20.37■□□□□ 0.85
SNRPD1-204ENST00000582475 WDR97A6NE52 1622 aa20.35■□□□□ 0.85
SNRPD1-204ENST00000582475 GRIN2BQ13224 1484 aa20.33■□□□□ 0.85
SNRPD1-204ENST00000582475 FBLN2P98095 1184 aa20.29■□□□□ 0.84
SNRPD1-204ENST00000582475 KIF27Q86VH2 1401 aa20.27■□□□□ 0.84
SNRPD1-204ENST00000582475 ABCA5Q8WWZ7 1642 aa20.27■□□□□ 0.84
SNRPD1-204ENST00000582475 SNAPC4Q5SXM2 1469 aa20.26■□□□□ 0.83
SNRPD1-204ENST00000582475 OSCARQ8IYS5 282 aa20.26■□□□□ 0.83
SNRPD1-204ENST00000582475 CHMP7Q8WUX9 453 aaPredicted RBP20.26■□□□□ 0.83
SNRPD1-204ENST00000582475 MAGI1Q96QZ7 1491 aaPredicted RBP20.23■□□□□ 0.83
SNRPD1-204ENST00000582475 IGF1RP08069 1367 aa20.21■□□□□ 0.83
SNRPD1-204ENST00000582475 DNAJC5Q9H3Z4 198 aa20.21■□□□□ 0.83
SNRPD1-204ENST00000582475 PBRM1Q86U86 1689 aa20.19■□□□□ 0.82
SNRPD1-204ENST00000582475 ERICH3Q5RHP9 1530 aa20.18■□□□□ 0.82
SNRPD1-204ENST00000582475 SYNJ2O15056 1496 aa20.16■□□□□ 0.82
SNRPD1-204ENST00000582475 RUSC2Q8N2Y8 1516 aa20.16■□□□□ 0.82
SNRPD1-204ENST00000582475 FHAD1B1AJZ9 1412 aa20.15■□□□□ 0.82
SNRPD1-204ENST00000582475 CARMIL1Q5VZK9 1371 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms