RNA–Protein interactions for RNA: ENST00000559453.5

PSME2-209, Transcript of proteasome activator subunit 2, humanhuman

TSL 5

Gene PSME2, Length 1,721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME2-209ENST00000559453 NISCHQ9Y2I1 1504 aa20.66■□□□□ 0.9
PSME2-209ENST00000559453 AEBP2Q6ZN18 517 aaPredicted RBP18.57■□□□□ 0.56
PSME2-209ENST00000559453 CCDC180Q9P1Z9 1646 aa17.57■□□□□ 0.4
PSME2-209ENST00000559453 ZCCHC6Q5VYS8 1495 aaKnown RBP17.54■□□□□ 0.4
PSME2-209ENST00000559453 SHROOM4Q9ULL8 1493 aa17.48■□□□□ 0.39
PSME2-209ENST00000559453 CHIC1Q5VXU3 224 aa17.41■□□□□ 0.38
PSME2-209ENST00000559453 SUPT5HO00267 1087 aaKnown RBP17.32■□□□□ 0.36
PSME2-209ENST00000559453 DCAF1Q9Y4B6 1507 aa17.11■□□□□ 0.33
PSME2-209ENST00000559453 HRCP23327 699 aa17.04■□□□□ 0.32
PSME2-209ENST00000559453 MYO15BQ96JP2 1530 aa17.01■□□□□ 0.31
PSME2-209ENST00000559453 DCAF8L2P0C7V8 631 aa16.75■□□□□ 0.27
PSME2-209ENST00000559453 PCGF6Q9BYE7 350 aa16.71■□□□□ 0.27
PSME2-209ENST00000559453 ABCC9O60706 1549 aa16.59■□□□□ 0.25
PSME2-209ENST00000559453 TRIM26Q12899 539 aaPredicted RBP16.52■□□□□ 0.24
PSME2-209ENST00000559453 LOC105371045A0A1W2PR82 267 aa16.46■□□□□ 0.23
PSME2-209ENST00000559453 ZEB1P37275 1124 aaPredicted RBP16.41■□□□□ 0.22
PSME2-209ENST00000559453 PPARGC1BQ86YN6 1023 aaKnown RBP16.4■□□□□ 0.22
PSME2-209ENST00000559453 RSF1Q96T23 1441 aaPredicted RBP16.39■□□□□ 0.22
PSME2-209ENST00000559453 RB1CC1Q8TDY2 1594 aa16.33■□□□□ 0.21
PSME2-209ENST00000559453 SCRIBQ14160 1630 aa16.26■□□□□ 0.19
PSME2-209ENST00000559453 TRIM41Q8WV44 630 aa16.24■□□□□ 0.19
PSME2-209ENST00000559453 NACADO15069 1562 aa16.16■□□□□ 0.18
PSME2-209ENST00000559453 PELP1Q8IZL8 1130 aaKnown RBP16.06■□□□□ 0.16
PSME2-209ENST00000559453 MROH2BQ7Z745 1585 aa15.99■□□□□ 0.15
PSME2-209ENST00000559453 CECR2Q9BXF3 1484 aa15.97■□□□□ 0.15
PSME2-209ENST00000559453 BAZ1AQ9NRL2 1556 aaPredicted RBP15.95■□□□□ 0.14
PSME2-209ENST00000559453 FAM9AQ8IZU1 332 aaPredicted RBP15.93■□□□□ 0.14
PSME2-209ENST00000559453 WIZO95785 1651 aa15.9■□□□□ 0.14
PSME2-209ENST00000559453 EIF4G1Q04637 1599 aaKnown RBP15.9■□□□□ 0.14
PSME2-209ENST00000559453 WRNQ14191 1432 aaPredicted RBP eCLIP15.81■□□□□ 0.12
PSME2-209ENST00000559453 SENP3Q9H4L4 574 aaPredicted RBP15.81■□□□□ 0.12
PSME2-209ENST00000559453 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
PSME2-209ENST00000559453 SCAF1Q9H7N4 1312 aaKnown RBP15.76■□□□□ 0.11
PSME2-209ENST00000559453 EEA1Q15075 1411 aa15.73■□□□□ 0.11
PSME2-209ENST00000559453 CCER1Q8TC90 406 aaPredicted RBP15.69■□□□□ 0.1
PSME2-209ENST00000559453 TNIKQ9UKE5 1360 aa15.67■□□□□ 0.1
PSME2-209ENST00000559453 SMARCA4P51532 1647 aa15.67■□□□□ 0.1
PSME2-209ENST00000559453 SMARCA2P51531 1590 aa15.65■□□□□ 0.1
PSME2-209ENST00000559453 CCDC88BA6NC98 1476 aa15.64■□□□□ 0.09
PSME2-209ENST00000559453 ACIN1Q9UKV3 1341 aaKnown RBP15.63■□□□□ 0.09
PSME2-209ENST00000559453 EHMT2Q96KQ7 1210 aa15.63■□□□□ 0.09
PSME2-209ENST00000559453 PHF23Q9BUL5 403 aaPredicted RBP15.63■□□□□ 0.09
PSME2-209ENST00000559453 CEP162Q5TB80 1403 aa15.62■□□□□ 0.09
PSME2-209ENST00000559453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.62■□□□□ 0.09
PSME2-209ENST00000559453 ABCC8Q09428 1581 aa15.57■□□□□ 0.08
PSME2-209ENST00000559453 CENPBP07199 599 aaPredicted RBP15.57■□□□□ 0.08
PSME2-209ENST00000559453 DIEXFQ68CQ4 756 aaKnown RBP15.55■□□□□ 0.08
PSME2-209ENST00000559453 CSRNP3Q8WYN3 585 aa15.53■□□□□ 0.08
PSME2-209ENST00000559453 GOLGA3Q08378 1498 aa15.51■□□□□ 0.07
PSME2-209ENST00000559453 SOGA1O94964 1423 aa15.5■□□□□ 0.07
PSME2-209ENST00000559453 NEUROD1Q13562 356 aa15.48■□□□□ 0.07
PSME2-209ENST00000559453 UNC13AQ9UPW8 1703 aa15.48■□□□□ 0.07
PSME2-209ENST00000559453 PEG3Q9GZU2 1588 aa15.46■□□□□ 0.07
PSME2-209ENST00000559453 ZNF316A6NFI3 1004 aaPredicted RBP15.43■□□□□ 0.06
PSME2-209ENST00000559453 KIF21BO75037 1637 aa15.43■□□□□ 0.06
PSME2-209ENST00000559453 CEP164Q9UPV0 1460 aa15.42■□□□□ 0.06
PSME2-209ENST00000559453 MYT1Q01538 1121 aa15.41■□□□□ 0.06
PSME2-209ENST00000559453 UBTFP17480 764 aaKnown RBP15.4■□□□□ 0.06
PSME2-209ENST00000559453 RUSC2Q8N2Y8 1516 aa15.38■□□□□ 0.05
PSME2-209ENST00000559453 BAZ1BQ9UIG0 1483 aaKnown RBP15.37■□□□□ 0.05
PSME2-209ENST00000559453 GTF3C3Q9Y5Q9 886 aa15.37■□□□□ 0.05
PSME2-209ENST00000559453 VPS8Q8N3P4 1428 aa15.3■□□□□ 0.04
PSME2-209ENST00000559453 CLIP1P30622 1438 aa15.29■□□□□ 0.04
PSME2-209ENST00000559453 BICRAQ9NZM4 1560 aa15.29■□□□□ 0.04
PSME2-209ENST00000559453 SYNJ1O43426 1573 aa15.28■□□□□ 0.04
PSME2-209ENST00000559453 CLSPNQ9HAW4 1339 aa15.25■□□□□ 0.03
PSME2-209ENST00000559453 TTBK1Q5TCY1 1321 aaPredicted RBP15.23■□□□□ 0.03
PSME2-209ENST00000559453 APLP2Q06481 763 aa15.2■□□□□ 0.02
PSME2-209ENST00000559453 ATAD2BQ9ULI0 1458 aa15.2■□□□□ 0.02
PSME2-209ENST00000559453 TOP2BQ02880 1626 aa15.17■□□□□ 0.02
PSME2-209ENST00000559453 ERICH3Q5RHP9 1530 aa15.16■□□□□ 0.02
PSME2-209ENST00000559453 HNRNPUL2Q1KMD3 747 aaKnown RBP15.14■□□□□ 0.01
PSME2-209ENST00000559453 RAPGEF2Q9Y4G8 1499 aa15.14■□□□□ 0.01
PSME2-209ENST00000559453 BIVM-ERCC5R4GMW8 1640 aa15.13■□□□□ 0.01
PSME2-209ENST00000559453 MIER1Q8N108 512 aa15.13■□□□□ 0.01
PSME2-209ENST00000559453 PRXQ9BXM0 1461 aa15.08■□□□□ 0
PSME2-209ENST00000559453 PABPN1Q86U42 306 aaKnown RBP eCLIP15.06■□□□□ 01e-8■■■□□ 14.9
PSME2-209ENST00000559453 DHX57Q6P158 1386 aaKnown RBP15.03■□□□□ -0
PSME2-209ENST00000559453 CUX2O14529 1486 aa15.03■□□□□ -0
PSME2-209ENST00000559453 YTHDC1Q96MU7 727 aaKnown RBP15.02□□□□□ -0.01
PSME2-209ENST00000559453 RRBP1Q9P2E9 1410 aaKnown RBP15.02□□□□□ -0.01
PSME2-209ENST00000559453 ARAP1Q96P48 1450 aa15.01□□□□□ -0.01
PSME2-209ENST00000559453 HMGXB3Q12766 1538 aa14.96□□□□□ -0.01
PSME2-209ENST00000559453 KIF27Q86VH2 1401 aa14.94□□□□□ -0.02
PSME2-209ENST00000559453 NCAPD3P42695 1498 aa14.92□□□□□ -0.02
PSME2-209ENST00000559453 MAP3K1Q13233 1512 aa14.91□□□□□ -0.02
PSME2-209ENST00000559453 CUX1P39880 1505 aa14.89□□□□□ -0.03
PSME2-209ENST00000559453 CCNB3Q8WWL7 1395 aa14.88□□□□□ -0.03
PSME2-209ENST00000559453 KANK4Q5T7N3 995 aaPredicted RBP14.86□□□□□ -0.03
PSME2-209ENST00000559453 CFTRP13569 1480 aa14.84□□□□□ -0.03
PSME2-209ENST00000559453 ARHGAP35Q9NRY4 1499 aa14.84□□□□□ -0.03
PSME2-209ENST00000559453 FOXD1Q16676 465 aa14.81□□□□□ -0.04
PSME2-209ENST00000559453 PRDM2Q13029 1718 aa14.81□□□□□ -0.04
PSME2-209ENST00000559453 RANGAP1P46060 587 aaPredicted RBP14.8□□□□□ -0.04
PSME2-209ENST00000559453 SUPT16HQ9Y5B9 1047 aaKnown RBP14.8□□□□□ -0.04
PSME2-209ENST00000559453 TIMELESSQ9UNS1 1208 aa14.78□□□□□ -0.04
PSME2-209ENST00000559453 TIAM1Q13009 1591 aa14.77□□□□□ -0.05
PSME2-209ENST00000559453 SETD5Q9C0A6 1442 aa14.74□□□□□ -0.05
PSME2-209ENST00000559453 MAPKBP1O60336 1514 aa14.73□□□□□ -0.05
PSME2-209ENST00000559453 RAB3GAP2Q9H2M9 1393 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms