RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 AEBP2Q6ZN18 517 aaPredicted RBP28.43■■■□□ 2.14
RPUSD4-205ENST00000530903 CHIC1Q5VXU3 224 aa26.75■■□□□ 1.87
RPUSD4-205ENST00000530903 POTEDQ86YR6 584 aa24.88■■□□□ 1.57
RPUSD4-205ENST00000530903 SENP3Q9H4L4 574 aaPredicted RBP24.3■■□□□ 1.48
RPUSD4-205ENST00000530903 PHF23Q9BUL5 403 aaPredicted RBP23.93■■□□□ 1.42
RPUSD4-205ENST00000530903 NISCHQ9Y2I1 1504 aa23.32■■□□□ 1.32
RPUSD4-205ENST00000530903 FOXD1Q16676 465 aa22.66■■□□□ 1.22
RPUSD4-205ENST00000530903 MSH5O43196 834 aa22■■□□□ 1.11
RPUSD4-205ENST00000530903 PLPPR3Q6T4P5 718 aa21.23■□□□□ 0.99
RPUSD4-205ENST00000530903 PIAS4Q8N2W9 510 aaPredicted RBP21.05■□□□□ 0.96
RPUSD4-205ENST00000530903 PPP6R1Q9UPN7 881 aa20.97■□□□□ 0.95
RPUSD4-205ENST00000530903 ADRA2BP18089 450 aa20.85■□□□□ 0.93
RPUSD4-205ENST00000530903 CCDC180Q9P1Z9 1646 aa20.53■□□□□ 0.88
RPUSD4-205ENST00000530903 CACNB1Q02641 598 aaPredicted RBP20.09■□□□□ 0.81
RPUSD4-205ENST00000530903 ABCC9O60706 1549 aa19.67■□□□□ 0.74
RPUSD4-205ENST00000530903 ZCCHC6Q5VYS8 1495 aaKnown RBP19.53■□□□□ 0.72
RPUSD4-205ENST00000530903 DCAF8L2P0C7V8 631 aa19.35■□□□□ 0.69
RPUSD4-205ENST00000530903 DCAF1Q9Y4B6 1507 aa19.27■□□□□ 0.68
RPUSD4-205ENST00000530903 DMRT2Q9Y5R5 561 aa19.25■□□□□ 0.67
RPUSD4-205ENST00000530903 MAPK8IP2Q13387 824 aaPredicted RBP19.24■□□□□ 0.67
RPUSD4-205ENST00000530903 NACADO15069 1562 aa19.16■□□□□ 0.66
RPUSD4-205ENST00000530903 MYO15BQ96JP2 1530 aa19.15■□□□□ 0.66
RPUSD4-205ENST00000530903 SCAF1Q9H7N4 1312 aaKnown RBP19.13■□□□□ 0.65
RPUSD4-205ENST00000530903 POTEHQ6S545 545 aa19.1■□□□□ 0.65
RPUSD4-205ENST00000530903 RB1CC1Q8TDY2 1594 aa19.09■□□□□ 0.65
RPUSD4-205ENST00000530903 SCRIBQ14160 1630 aa18.84■□□□□ 0.61
RPUSD4-205ENST00000530903 SHROOM4Q9ULL8 1493 aa18.82■□□□□ 0.6
RPUSD4-205ENST00000530903 UNC13AQ9UPW8 1703 aa18.74■□□□□ 0.59
RPUSD4-205ENST00000530903 PPP4R3CPQ6ZMV5 832 aa18.56■□□□□ 0.56
RPUSD4-205ENST00000530903 RNF39Q9H2S5 420 aa18.56■□□□□ 0.56
RPUSD4-205ENST00000530903 BICRAQ9NZM4 1560 aa18.51■□□□□ 0.55
RPUSD4-205ENST00000530903 HOXD11P31277 338 aaPredicted RBP18.47■□□□□ 0.55
RPUSD4-205ENST00000530903 PABPN1Q86U42 306 aaKnown RBP eCLIP18.47■□□□□ 0.55
RPUSD4-205ENST00000530903 CNKSR2Q8WXI2 1034 aa18.3■□□□□ 0.52
RPUSD4-205ENST00000530903 DCAF8L1A6NGE4 600 aa18.29■□□□□ 0.52
RPUSD4-205ENST00000530903 RNF216Q9NWF9 866 aaPredicted RBP18.23■□□□□ 0.51
RPUSD4-205ENST00000530903 C1QBPQ07021 282 aaKnown RBP18.19■□□□□ 0.5
RPUSD4-205ENST00000530903 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
RPUSD4-205ENST00000530903 BAZ1AQ9NRL2 1556 aaPredicted RBP18.04■□□□□ 0.48
RPUSD4-205ENST00000530903 SMARCA4P51532 1647 aa18.02■□□□□ 0.48
RPUSD4-205ENST00000530903 MROH2BQ7Z745 1585 aa18.02■□□□□ 0.48
RPUSD4-205ENST00000530903 EIF4G1Q04637 1599 aaKnown RBP17.98■□□□□ 0.47
RPUSD4-205ENST00000530903 DNAJC5BQ9UF47 199 aa17.98■□□□□ 0.47
RPUSD4-205ENST00000530903 RSF1Q96T23 1441 aaPredicted RBP17.96■□□□□ 0.47
RPUSD4-205ENST00000530903 SUPT5HO00267 1087 aaKnown RBP17.93■□□□□ 0.46
RPUSD4-205ENST00000530903 WIZO95785 1651 aa17.88■□□□□ 0.45
RPUSD4-205ENST00000530903 CC2D2AQ9P2K1 1620 aa17.81■□□□□ 0.44
RPUSD4-205ENST00000530903 PEG3Q9GZU2 1588 aa17.78■□□□□ 0.44
RPUSD4-205ENST00000530903 SMARCA2P51531 1590 aa17.77■□□□□ 0.44
RPUSD4-205ENST00000530903 ATAD2BQ9ULI0 1458 aa17.77■□□□□ 0.44
RPUSD4-205ENST00000530903 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
RPUSD4-205ENST00000530903 BAZ1BQ9UIG0 1483 aaKnown RBP17.67■□□□□ 0.42
RPUSD4-205ENST00000530903 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
RPUSD4-205ENST00000530903 NCAPD3P42695 1498 aa17.66■□□□□ 0.42
RPUSD4-205ENST00000530903 HMGXB3Q12766 1538 aa17.64■□□□□ 0.41
RPUSD4-205ENST00000530903 NPM3O75607 178 aaKnown RBP17.51■□□□□ 0.39
RPUSD4-205ENST00000530903 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.47■□□□□ 0.392e-6■■□□□ 11.6
RPUSD4-205ENST00000530903 CCDC88BA6NC98 1476 aa17.46■□□□□ 0.39
RPUSD4-205ENST00000530903 CFTRP13569 1480 aa17.19■□□□□ 0.34
RPUSD4-205ENST00000530903 CADPSQ9ULU8 1353 aa17.18■□□□□ 0.34
RPUSD4-205ENST00000530903 NESP48681 1621 aa17.18■□□□□ 0.34
RPUSD4-205ENST00000530903 PRDM2Q13029 1718 aa17.17■□□□□ 0.34
RPUSD4-205ENST00000530903 LAMC3Q9Y6N6 1575 aa17.14■□□□□ 0.34
RPUSD4-205ENST00000530903 U3KPZ7 1027 aaPredicted RBP17.13■□□□□ 0.33
RPUSD4-205ENST00000530903 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.32
RPUSD4-205ENST00000530903 ABCC8Q09428 1581 aa17.02■□□□□ 0.32
RPUSD4-205ENST00000530903 KIF21AQ7Z4S6 1674 aa17.01■□□□□ 0.31
RPUSD4-205ENST00000530903 PDS5BQ9NTI5 1447 aa17■□□□□ 0.31
RPUSD4-205ENST00000530903 SP7Q8TDD2 431 aaPredicted RBP16.96■□□□□ 0.31
RPUSD4-205ENST00000530903 CEP164Q9UPV0 1460 aa16.95■□□□□ 0.3
RPUSD4-205ENST00000530903 DSG3P32926 999 aa16.93■□□□□ 0.3
RPUSD4-205ENST00000530903 WRNQ14191 1432 aaPredicted RBP eCLIP16.92■□□□□ 0.3
RPUSD4-205ENST00000530903 SPINK5Q9NQ38 1064 aaPredicted RBP16.92■□□□□ 0.3
RPUSD4-205ENST00000530903 ERCC6Q03468 1493 aa16.91■□□□□ 0.3
RPUSD4-205ENST00000530903 SYNJ1O43426 1573 aa16.9■□□□□ 0.3
RPUSD4-205ENST00000530903 KCNA4P22459 653 aa16.89■□□□□ 0.29
RPUSD4-205ENST00000530903 CUX1P39880 1505 aa16.88■□□□□ 0.29
RPUSD4-205ENST00000530903 CAPN15O75808 1086 aa16.87■□□□□ 0.29
RPUSD4-205ENST00000530903 TRIM41Q8WV44 630 aa16.87■□□□□ 0.29
RPUSD4-205ENST00000530903 BIVM-ERCC5R4GMW8 1640 aa16.85■□□□□ 0.29
RPUSD4-205ENST00000530903 TOP2BQ02880 1626 aa16.84■□□□□ 0.29
RPUSD4-205ENST00000530903 URB2Q14146 1524 aaKnown RBP16.84■□□□□ 0.29
RPUSD4-205ENST00000530903 DNMBPQ6XZF7 1577 aa16.83■□□□□ 0.28
RPUSD4-205ENST00000530903 MRC2Q9UBG0 1479 aa16.82■□□□□ 0.28
RPUSD4-205ENST00000530903 SLC4A2P04920 1241 aa16.82■□□□□ 0.28
RPUSD4-205ENST00000530903 TOPBP1Q92547 1522 aa16.81■□□□□ 0.28
RPUSD4-205ENST00000530903 THOC2Q8NI27 1593 aaKnown RBP16.79■□□□□ 0.28
RPUSD4-205ENST00000530903 WDR62O43379 1518 aa16.75■□□□□ 0.27
RPUSD4-205ENST00000530903 FGD5Q6ZNL6 1462 aa16.74■□□□□ 0.27
RPUSD4-205ENST00000530903 POLA1P09884 1462 aaPredicted RBP16.7■□□□□ 0.26
RPUSD4-205ENST00000530903 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.25
RPUSD4-205ENST00000530903 APLP2Q06481 763 aa16.63■□□□□ 0.25
RPUSD4-205ENST00000530903 SOGA1O94964 1423 aa16.62■□□□□ 0.25
RPUSD4-205ENST00000530903 CUX2O14529 1486 aa16.61■□□□□ 0.25
RPUSD4-205ENST00000530903 WDR97A6NE52 1622 aa16.6■□□□□ 0.25
RPUSD4-205ENST00000530903 TARBP1Q13395 1621 aaKnown RBP16.6■□□□□ 0.25
RPUSD4-205ENST00000530903 PLSCR2Q9NRY7 297 aa16.59■□□□□ 0.25
RPUSD4-205ENST00000530903 RUSC2Q8N2Y8 1516 aa16.58■□□□□ 0.24
RPUSD4-205ENST00000530903 FAM9AQ8IZU1 332 aaPredicted RBP16.57■□□□□ 0.24
RPUSD4-205ENST00000530903 ABCA10Q8WWZ4 1543 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms