Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HRH3Q9Y5N1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.96■■□□□ 1.27
HRH3Q9Y5N1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HRH3Q9Y5N1 MIR219A2-201ENST00000608502 1504 ntBASIC22.96■■□□□ 1.27
HRH3Q9Y5N1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
HRH3Q9Y5N1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HRH3Q9Y5N1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
HRH3Q9Y5N1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
HRH3Q9Y5N1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.95■■□□□ 1.26
HRH3Q9Y5N1 AC148477.6-201ENST00000623746 465 ntBASIC22.95■■□□□ 1.26
HRH3Q9Y5N1 AC022413.1-201ENST00000624602 984 ntBASIC22.95■■□□□ 1.26
HRH3Q9Y5N1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
HRH3Q9Y5N1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HRH3Q9Y5N1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
HRH3Q9Y5N1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
HRH3Q9Y5N1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
HRH3Q9Y5N1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.93■■□□□ 1.26
HRH3Q9Y5N1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.92■■□□□ 1.26
HRH3Q9Y5N1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
HRH3Q9Y5N1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.92■■□□□ 1.26
HRH3Q9Y5N1 ABHD17AP5-201ENST00000580133 923 ntBASIC22.92■■□□□ 1.26
HRH3Q9Y5N1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
HRH3Q9Y5N1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
HRH3Q9Y5N1 AC018358.1-201ENST00000631079 1402 ntBASIC22.91■■□□□ 1.26
HRH3Q9Y5N1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HRH3Q9Y5N1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
HRH3Q9Y5N1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
HRH3Q9Y5N1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
HRH3Q9Y5N1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
HRH3Q9Y5N1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
HRH3Q9Y5N1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
HRH3Q9Y5N1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HRH3Q9Y5N1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
HRH3Q9Y5N1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.9■■□□□ 1.26
HRH3Q9Y5N1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HRH3Q9Y5N1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HRH3Q9Y5N1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HRH3Q9Y5N1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
HRH3Q9Y5N1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
HRH3Q9Y5N1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
HRH3Q9Y5N1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
HRH3Q9Y5N1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
HRH3Q9Y5N1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
HRH3Q9Y5N1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
HRH3Q9Y5N1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
HRH3Q9Y5N1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
HRH3Q9Y5N1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.89■■□□□ 1.25
HRH3Q9Y5N1 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.89■■□□□ 1.25
HRH3Q9Y5N1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
HRH3Q9Y5N1 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.89■■□□□ 1.25
HRH3Q9Y5N1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
HRH3Q9Y5N1 AC142086.6-201ENST00000621154 1765 ntBASIC22.89■■□□□ 1.25
HRH3Q9Y5N1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.89■■□□□ 1.25
HRH3Q9Y5N1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
HRH3Q9Y5N1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
HRH3Q9Y5N1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
HRH3Q9Y5N1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.88■■□□□ 1.25
HRH3Q9Y5N1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.88■■□□□ 1.25
HRH3Q9Y5N1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.87■■□□□ 1.25
HRH3Q9Y5N1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
HRH3Q9Y5N1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
HRH3Q9Y5N1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
HRH3Q9Y5N1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
HRH3Q9Y5N1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.86■■□□□ 1.25
HRH3Q9Y5N1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
HRH3Q9Y5N1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
HRH3Q9Y5N1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.86■■□□□ 1.25
HRH3Q9Y5N1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
HRH3Q9Y5N1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.86■■□□□ 1.25
HRH3Q9Y5N1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
HRH3Q9Y5N1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
HRH3Q9Y5N1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
HRH3Q9Y5N1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.85■■□□□ 1.25
HRH3Q9Y5N1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HRH3Q9Y5N1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HRH3Q9Y5N1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.84■■□□□ 1.25
HRH3Q9Y5N1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HRH3Q9Y5N1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HRH3Q9Y5N1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
HRH3Q9Y5N1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
HRH3Q9Y5N1 LINC01003-201ENST00000564834 1764 ntBASIC22.83■■□□□ 1.24
HRH3Q9Y5N1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HRH3Q9Y5N1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.82■■□□□ 1.24
HRH3Q9Y5N1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
HRH3Q9Y5N1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.81■■□□□ 1.24
HRH3Q9Y5N1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
HRH3Q9Y5N1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HRH3Q9Y5N1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HRH3Q9Y5N1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.8■■□□□ 1.24
HRH3Q9Y5N1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.8■■□□□ 1.24
HRH3Q9Y5N1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HRH3Q9Y5N1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HRH3Q9Y5N1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
HRH3Q9Y5N1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
HRH3Q9Y5N1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.79■■□□□ 1.24
HRH3Q9Y5N1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
HRH3Q9Y5N1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
HRH3Q9Y5N1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
HRH3Q9Y5N1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.78■■□□□ 1.24
HRH3Q9Y5N1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms