Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.42■■□□□ 1.82
CSNK1G1Q9HCP0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CSNK1G1Q9HCP0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.41■■□□□ 1.82
CSNK1G1Q9HCP0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.41■■□□□ 1.82
CSNK1G1Q9HCP0 AC060814.1-201ENST00000554326 538 ntBASIC26.41■■□□□ 1.82
CSNK1G1Q9HCP0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.41■■□□□ 1.82
CSNK1G1Q9HCP0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.4■■□□□ 1.82
CSNK1G1Q9HCP0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CSNK1G1Q9HCP0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CSNK1G1Q9HCP0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
CSNK1G1Q9HCP0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
CSNK1G1Q9HCP0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.39■■□□□ 1.82
CSNK1G1Q9HCP0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
CSNK1G1Q9HCP0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.39■■□□□ 1.81
CSNK1G1Q9HCP0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.38■■□□□ 1.81
CSNK1G1Q9HCP0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CSNK1G1Q9HCP0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CSNK1G1Q9HCP0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
CSNK1G1Q9HCP0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CSNK1G1Q9HCP0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CSNK1G1Q9HCP0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
CSNK1G1Q9HCP0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CSNK1G1Q9HCP0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CSNK1G1Q9HCP0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CSNK1G1Q9HCP0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CSNK1G1Q9HCP0 AC126177.7-201ENST00000547904 679 ntBASIC26.36■■□□□ 1.81
CSNK1G1Q9HCP0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CSNK1G1Q9HCP0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
CSNK1G1Q9HCP0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CSNK1G1Q9HCP0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.35■■□□□ 1.81
CSNK1G1Q9HCP0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
CSNK1G1Q9HCP0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CSNK1G1Q9HCP0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
CSNK1G1Q9HCP0 LINC01003-201ENST00000564834 1764 ntBASIC26.34■■□□□ 1.81
CSNK1G1Q9HCP0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.34■■□□□ 1.81
CSNK1G1Q9HCP0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CSNK1G1Q9HCP0 AC142086.6-201ENST00000621154 1765 ntBASIC26.33■■□□□ 1.81
CSNK1G1Q9HCP0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.33■■□□□ 1.81
CSNK1G1Q9HCP0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.33■■□□□ 1.81
CSNK1G1Q9HCP0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.33■■□□□ 1.81
CSNK1G1Q9HCP0 RNF126P1-201ENST00000567452 1320 ntBASIC26.33■■□□□ 1.81
CSNK1G1Q9HCP0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
CSNK1G1Q9HCP0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CSNK1G1Q9HCP0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CSNK1G1Q9HCP0 AC092296.2-201ENST00000589470 999 ntBASIC26.32■■□□□ 1.8
CSNK1G1Q9HCP0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CSNK1G1Q9HCP0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CSNK1G1Q9HCP0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.31■■□□□ 1.8
CSNK1G1Q9HCP0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.3■■□□□ 1.8
CSNK1G1Q9HCP0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CSNK1G1Q9HCP0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.3■■□□□ 1.8
CSNK1G1Q9HCP0 AL359258.2-201ENST00000564063 1566 ntBASIC26.29■■□□□ 1.8
CSNK1G1Q9HCP0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CSNK1G1Q9HCP0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CSNK1G1Q9HCP0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.29■■□□□ 1.8
CSNK1G1Q9HCP0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.28■■□□□ 1.8
CSNK1G1Q9HCP0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CSNK1G1Q9HCP0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CSNK1G1Q9HCP0 RARRES2P2-201ENST00000394842 485 ntBASIC26.27■■□□□ 1.8
CSNK1G1Q9HCP0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CSNK1G1Q9HCP0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.26■■□□□ 1.79
CSNK1G1Q9HCP0 BX255925.1-201ENST00000566954 1854 ntBASIC26.26■■□□□ 1.79
CSNK1G1Q9HCP0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.26■■□□□ 1.79
CSNK1G1Q9HCP0 AL157400.5-201ENST00000507624 621 ntBASIC26.26■■□□□ 1.79
CSNK1G1Q9HCP0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CSNK1G1Q9HCP0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CSNK1G1Q9HCP0 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
CSNK1G1Q9HCP0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.25■■□□□ 1.79
CSNK1G1Q9HCP0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
CSNK1G1Q9HCP0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
CSNK1G1Q9HCP0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CSNK1G1Q9HCP0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CSNK1G1Q9HCP0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
CSNK1G1Q9HCP0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.23■■□□□ 1.79
CSNK1G1Q9HCP0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CSNK1G1Q9HCP0 WHAMMP3-201ENST00000611636 1609 ntBASIC26.23■■□□□ 1.79
CSNK1G1Q9HCP0 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CSNK1G1Q9HCP0 ECEL1P2-201ENST00000461596 1295 ntBASIC26.22■■□□□ 1.79
CSNK1G1Q9HCP0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.22■■□□□ 1.79
CSNK1G1Q9HCP0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CSNK1G1Q9HCP0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CSNK1G1Q9HCP0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
CSNK1G1Q9HCP0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
CSNK1G1Q9HCP0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CSNK1G1Q9HCP0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CSNK1G1Q9HCP0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CSNK1G1Q9HCP0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CSNK1G1Q9HCP0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
CSNK1G1Q9HCP0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.19■■□□□ 1.78
CSNK1G1Q9HCP0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
CSNK1G1Q9HCP0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CSNK1G1Q9HCP0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.19■■□□□ 1.78
CSNK1G1Q9HCP0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CSNK1G1Q9HCP0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CSNK1G1Q9HCP0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CSNK1G1Q9HCP0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.17■■□□□ 1.78
CSNK1G1Q9HCP0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CSNK1G1Q9HCP0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CSNK1G1Q9HCP0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.17■■□□□ 1.78
CSNK1G1Q9HCP0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms