Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF183Q96D59 AC126177.7-201ENST00000547904 679 ntBASIC18.31■□□□□ 0.52
RNF183Q96D59 AC060814.1-201ENST00000554326 538 ntBASIC18.31■□□□□ 0.52
RNF183Q96D59 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF183Q96D59 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF183Q96D59 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF183Q96D59 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RNF183Q96D59 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF183Q96D59 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF183Q96D59 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF183Q96D59 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF183Q96D59 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF183Q96D59 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF183Q96D59 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF183Q96D59 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF183Q96D59 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF183Q96D59 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF183Q96D59 ABHD17AP5-201ENST00000580133 923 ntBASIC18.28■□□□□ 0.52
RNF183Q96D59 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF183Q96D59 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF183Q96D59 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF183Q96D59 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF183Q96D59 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF183Q96D59 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF183Q96D59 AP002414.2-202ENST00000590929 1450 ntBASIC18.26■□□□□ 0.51
RNF183Q96D59 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RNF183Q96D59 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF183Q96D59 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF183Q96D59 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF183Q96D59 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF183Q96D59 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
RNF183Q96D59 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF183Q96D59 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF183Q96D59 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF183Q96D59 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF183Q96D59 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF183Q96D59 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF183Q96D59 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF183Q96D59 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF183Q96D59 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF183Q96D59 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF183Q96D59 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RNF183Q96D59 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF183Q96D59 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF183Q96D59 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RNF183Q96D59 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RNF183Q96D59 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF183Q96D59 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF183Q96D59 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF183Q96D59 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF183Q96D59 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF183Q96D59 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF183Q96D59 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF183Q96D59 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF183Q96D59 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF183Q96D59 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF183Q96D59 AC092296.2-201ENST00000589470 999 ntBASIC18.21■□□□□ 0.51
RNF183Q96D59 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF183Q96D59 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF183Q96D59 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF183Q96D59 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
RNF183Q96D59 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RNF183Q96D59 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF183Q96D59 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF183Q96D59 ECEL1P2-201ENST00000461596 1295 ntBASIC18.2■□□□□ 0.5
RNF183Q96D59 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF183Q96D59 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF183Q96D59 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF183Q96D59 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RNF183Q96D59 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF183Q96D59 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF183Q96D59 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF183Q96D59 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF183Q96D59 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF183Q96D59 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RNF183Q96D59 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RNF183Q96D59 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
RNF183Q96D59 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF183Q96D59 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF183Q96D59 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF183Q96D59 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF183Q96D59 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF183Q96D59 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF183Q96D59 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RNF183Q96D59 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF183Q96D59 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
RNF183Q96D59 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF183Q96D59 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF183Q96D59 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF183Q96D59 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF183Q96D59 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF183Q96D59 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF183Q96D59 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF183Q96D59 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF183Q96D59 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF183Q96D59 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RNF183Q96D59 AL359258.2-201ENST00000564063 1566 ntBASIC18.15■□□□□ 0.5
RNF183Q96D59 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF183Q96D59 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF183Q96D59 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms