Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.83■■□□□ 1.41
VPS33AQ96AX1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
VPS33AQ96AX1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.83■■□□□ 1.41
VPS33AQ96AX1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.82■■□□□ 1.4
VPS33AQ96AX1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
VPS33AQ96AX1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS33AQ96AX1 AC145676.1-201ENST00000514988 2004 ntBASIC23.81■■□□□ 1.4
VPS33AQ96AX1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VPS33AQ96AX1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS33AQ96AX1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.81■■□□□ 1.4
VPS33AQ96AX1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS33AQ96AX1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS33AQ96AX1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS33AQ96AX1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS33AQ96AX1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
VPS33AQ96AX1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS33AQ96AX1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
VPS33AQ96AX1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.8■■□□□ 1.4
VPS33AQ96AX1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
VPS33AQ96AX1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS33AQ96AX1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.79■■□□□ 1.4
VPS33AQ96AX1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.79■■□□□ 1.4
VPS33AQ96AX1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
VPS33AQ96AX1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS33AQ96AX1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
VPS33AQ96AX1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.78■■□□□ 1.4
VPS33AQ96AX1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
VPS33AQ96AX1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS33AQ96AX1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS33AQ96AX1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.77■■□□□ 1.4
VPS33AQ96AX1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS33AQ96AX1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS33AQ96AX1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS33AQ96AX1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS33AQ96AX1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.75■■□□□ 1.39
VPS33AQ96AX1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.75■■□□□ 1.39
VPS33AQ96AX1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
VPS33AQ96AX1 AC020928.2-201ENST00000588717 2197 ntBASIC23.75■■□□□ 1.39
VPS33AQ96AX1 AP004609.3-201ENST00000610705 1884 ntBASIC23.75■■□□□ 1.39
VPS33AQ96AX1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
VPS33AQ96AX1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.74■■□□□ 1.39
VPS33AQ96AX1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.74■■□□□ 1.39
VPS33AQ96AX1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
VPS33AQ96AX1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
VPS33AQ96AX1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.72■■□□□ 1.39
VPS33AQ96AX1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
VPS33AQ96AX1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS33AQ96AX1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS33AQ96AX1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS33AQ96AX1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS33AQ96AX1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.71■■□□□ 1.39
VPS33AQ96AX1 MIR3665-201ENST00000578708 105 ntBASIC23.71■■□□□ 1.39
VPS33AQ96AX1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
VPS33AQ96AX1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
VPS33AQ96AX1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
VPS33AQ96AX1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
VPS33AQ96AX1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
VPS33AQ96AX1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.7■■□□□ 1.38
VPS33AQ96AX1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.7■■□□□ 1.38
VPS33AQ96AX1 AC092803.2-201ENST00000564287 1899 ntBASIC23.7■■□□□ 1.38
VPS33AQ96AX1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.69■■□□□ 1.38
VPS33AQ96AX1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS33AQ96AX1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS33AQ96AX1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.69■■□□□ 1.38
VPS33AQ96AX1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS33AQ96AX1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
VPS33AQ96AX1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.68■■□□□ 1.38
VPS33AQ96AX1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.68■■□□□ 1.38
VPS33AQ96AX1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.68■■□□□ 1.38
VPS33AQ96AX1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
VPS33AQ96AX1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
VPS33AQ96AX1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.67■■□□□ 1.38
VPS33AQ96AX1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.67■■□□□ 1.38
VPS33AQ96AX1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.67■■□□□ 1.38
VPS33AQ96AX1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.67■■□□□ 1.38
VPS33AQ96AX1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS33AQ96AX1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS33AQ96AX1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
VPS33AQ96AX1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS33AQ96AX1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS33AQ96AX1 DUSP8P4-201ENST00000399538 1761 ntBASIC23.65■■□□□ 1.38
VPS33AQ96AX1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS33AQ96AX1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.65■■□□□ 1.38
VPS33AQ96AX1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
VPS33AQ96AX1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.64■■□□□ 1.38
VPS33AQ96AX1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
VPS33AQ96AX1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.64■■□□□ 1.37
VPS33AQ96AX1 AC110285.7-201ENST00000624417 1536 ntBASIC23.64■■□□□ 1.37
VPS33AQ96AX1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.63■■□□□ 1.37
VPS33AQ96AX1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS33AQ96AX1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS33AQ96AX1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
VPS33AQ96AX1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
VPS33AQ96AX1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS33AQ96AX1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
VPS33AQ96AX1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS33AQ96AX1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS33AQ96AX1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS33AQ96AX1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.61■■□□□ 1.37
VPS33AQ96AX1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 292.3 ms