Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC33.21■■■□□ 2.91
RAPGEF4Q8WZA2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
RAPGEF4Q8WZA2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC33.21■■■□□ 2.91
RAPGEF4Q8WZA2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC33.21■■■□□ 2.91
RAPGEF4Q8WZA2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC33.21■■■□□ 2.91
RAPGEF4Q8WZA2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC33.21■■■□□ 2.91
RAPGEF4Q8WZA2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC33.21■■■□□ 2.91
RAPGEF4Q8WZA2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
RAPGEF4Q8WZA2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC33.2■■■□□ 2.91
RAPGEF4Q8WZA2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
RAPGEF4Q8WZA2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
RAPGEF4Q8WZA2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
RAPGEF4Q8WZA2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
RAPGEF4Q8WZA2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC33.19■■■□□ 2.9
RAPGEF4Q8WZA2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC33.19■■■□□ 2.9
RAPGEF4Q8WZA2 AC026202.3-201ENST00000600805 1127 ntBASIC33.19■■■□□ 2.9
RAPGEF4Q8WZA2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC33.18■■■□□ 2.9
RAPGEF4Q8WZA2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
RAPGEF4Q8WZA2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC33.18■■■□□ 2.9
RAPGEF4Q8WZA2 AC025884.2-201ENST00000553429 711 ntBASIC33.18■■■□□ 2.9
RAPGEF4Q8WZA2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC33.18■■■□□ 2.9
RAPGEF4Q8WZA2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC33.17■■■□□ 2.9
RAPGEF4Q8WZA2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
RAPGEF4Q8WZA2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
RAPGEF4Q8WZA2 HES4-204ENST00000484667 667 ntTSL 3 BASIC33.16■■■□□ 2.9
RAPGEF4Q8WZA2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
RAPGEF4Q8WZA2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC33.15■■■□□ 2.9
RAPGEF4Q8WZA2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC33.14■■■□□ 2.9
RAPGEF4Q8WZA2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC33.13■■■□□ 2.89
RAPGEF4Q8WZA2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC33.13■■■□□ 2.89
RAPGEF4Q8WZA2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
RAPGEF4Q8WZA2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
RAPGEF4Q8WZA2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
RAPGEF4Q8WZA2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC33.12■■■□□ 2.89
RAPGEF4Q8WZA2 RP9P-202ENST00000450133 1212 ntBASIC33.12■■■□□ 2.89
RAPGEF4Q8WZA2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
RAPGEF4Q8WZA2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
RAPGEF4Q8WZA2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC33.11■■■□□ 2.89
RAPGEF4Q8WZA2 AL139393.2-201ENST00000608721 2025 ntBASIC33.11■■■□□ 2.89
RAPGEF4Q8WZA2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC33.11■■■□□ 2.89
RAPGEF4Q8WZA2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
RAPGEF4Q8WZA2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
RAPGEF4Q8WZA2 ABCB10P3-201ENST00000561950 2166 ntBASIC33.1■■■□□ 2.89
RAPGEF4Q8WZA2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
RAPGEF4Q8WZA2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC33.09■■■□□ 2.89
RAPGEF4Q8WZA2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
RAPGEF4Q8WZA2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
RAPGEF4Q8WZA2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC33.08■■■□□ 2.89
RAPGEF4Q8WZA2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC33.07■■■□□ 2.88
RAPGEF4Q8WZA2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
RAPGEF4Q8WZA2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC33.07■■■□□ 2.88
RAPGEF4Q8WZA2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
RAPGEF4Q8WZA2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC33.07■■■□□ 2.88
RAPGEF4Q8WZA2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC33.07■■■□□ 2.88
RAPGEF4Q8WZA2 AC093536.1-201ENST00000569153 554 ntBASIC33.07■■■□□ 2.88
RAPGEF4Q8WZA2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC33.07■■■□□ 2.88
RAPGEF4Q8WZA2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC33.07■■■□□ 2.88
RAPGEF4Q8WZA2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC33.07■■■□□ 2.88
RAPGEF4Q8WZA2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
RAPGEF4Q8WZA2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC33.06■■■□□ 2.88
RAPGEF4Q8WZA2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
RAPGEF4Q8WZA2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
RAPGEF4Q8WZA2 DUX4L9-201ENST00000449051 1259 ntBASIC33.05■■■□□ 2.88
RAPGEF4Q8WZA2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
RAPGEF4Q8WZA2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
RAPGEF4Q8WZA2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC33.04■■■□□ 2.88
RAPGEF4Q8WZA2 RAP2CP1-202ENST00000605179 643 ntBASIC33.03■■■□□ 2.88
RAPGEF4Q8WZA2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC33.03■■■□□ 2.88
RAPGEF4Q8WZA2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC33.03■■■□□ 2.88
RAPGEF4Q8WZA2 AP002414.2-202ENST00000590929 1450 ntBASIC33.02■■■□□ 2.88
RAPGEF4Q8WZA2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC33.02■■■□□ 2.88
RAPGEF4Q8WZA2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
RAPGEF4Q8WZA2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.87
RAPGEF4Q8WZA2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
RAPGEF4Q8WZA2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC33■■■□□ 2.87
RAPGEF4Q8WZA2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC32.99■■■□□ 2.87
RAPGEF4Q8WZA2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC32.99■■■□□ 2.87
RAPGEF4Q8WZA2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC32.99■■■□□ 2.87
RAPGEF4Q8WZA2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC32.99■■■□□ 2.87
RAPGEF4Q8WZA2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC32.99■■■□□ 2.87
RAPGEF4Q8WZA2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
RAPGEF4Q8WZA2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
RAPGEF4Q8WZA2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC32.98■■■□□ 2.87
RAPGEF4Q8WZA2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC32.98■■■□□ 2.87
RAPGEF4Q8WZA2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
RAPGEF4Q8WZA2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC32.97■■■□□ 2.87
RAPGEF4Q8WZA2 MIR3960-201ENST00000583311 91 ntBASIC32.97■■■□□ 2.87
RAPGEF4Q8WZA2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
RAPGEF4Q8WZA2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
RAPGEF4Q8WZA2 SPCS2P3-201ENST00000500401 656 ntBASIC32.96■■■□□ 2.87
RAPGEF4Q8WZA2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC32.95■■■□□ 2.87
RAPGEF4Q8WZA2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC32.95■■■□□ 2.87
RAPGEF4Q8WZA2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC32.95■■■□□ 2.87
RAPGEF4Q8WZA2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
RAPGEF4Q8WZA2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC32.94■■■□□ 2.86
RAPGEF4Q8WZA2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
RAPGEF4Q8WZA2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
RAPGEF4Q8WZA2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC32.94■■■□□ 2.86
RAPGEF4Q8WZA2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC32.94■■■□□ 2.86
RAPGEF4Q8WZA2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 150.9 ms