Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC9CQ8N5M4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TTC9CQ8N5M4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TTC9CQ8N5M4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC9CQ8N5M4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TTC9CQ8N5M4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC9CQ8N5M4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TTC9CQ8N5M4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC9CQ8N5M4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC9CQ8N5M4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TTC9CQ8N5M4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC9CQ8N5M4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC9CQ8N5M4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC9CQ8N5M4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TTC9CQ8N5M4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC9CQ8N5M4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.64■□□□□ 0.73
TTC9CQ8N5M4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC9CQ8N5M4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TTC9CQ8N5M4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC9CQ8N5M4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.63■□□□□ 0.73
TTC9CQ8N5M4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC9CQ8N5M4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TTC9CQ8N5M4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TTC9CQ8N5M4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TTC9CQ8N5M4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TTC9CQ8N5M4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.62■□□□□ 0.73
TTC9CQ8N5M4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.62■□□□□ 0.73
TTC9CQ8N5M4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.62■□□□□ 0.73
TTC9CQ8N5M4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC9CQ8N5M4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC9CQ8N5M4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
TTC9CQ8N5M4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.61■□□□□ 0.73
TTC9CQ8N5M4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TTC9CQ8N5M4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC9CQ8N5M4 CR559946.2-201ENST00000623684 991 ntBASIC19.61■□□□□ 0.73
TTC9CQ8N5M4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC9CQ8N5M4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC9CQ8N5M4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TTC9CQ8N5M4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TTC9CQ8N5M4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.6■□□□□ 0.73
TTC9CQ8N5M4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TTC9CQ8N5M4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.6■□□□□ 0.73
TTC9CQ8N5M4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TTC9CQ8N5M4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC9CQ8N5M4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.59■□□□□ 0.73
TTC9CQ8N5M4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.59■□□□□ 0.73
TTC9CQ8N5M4 MIR3648-2-201ENST00000581792 180 ntBASIC19.59■□□□□ 0.73
TTC9CQ8N5M4 MIR3648-1-201ENST00000615959 180 ntBASIC19.59■□□□□ 0.73
TTC9CQ8N5M4 AC148477.6-201ENST00000623746 465 ntBASIC19.59■□□□□ 0.73
TTC9CQ8N5M4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.59■□□□□ 0.73
TTC9CQ8N5M4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC9CQ8N5M4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
TTC9CQ8N5M4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.58■□□□□ 0.73
TTC9CQ8N5M4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TTC9CQ8N5M4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
TTC9CQ8N5M4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.58■□□□□ 0.72
TTC9CQ8N5M4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
TTC9CQ8N5M4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
TTC9CQ8N5M4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TTC9CQ8N5M4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
TTC9CQ8N5M4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TTC9CQ8N5M4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TTC9CQ8N5M4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC9CQ8N5M4 WHAMMP3-201ENST00000611636 1609 ntBASIC19.57■□□□□ 0.72
TTC9CQ8N5M4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC9CQ8N5M4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC9CQ8N5M4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.56■□□□□ 0.72
TTC9CQ8N5M4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TTC9CQ8N5M4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TTC9CQ8N5M4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.55■□□□□ 0.72
TTC9CQ8N5M4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TTC9CQ8N5M4 MIR7108-201ENST00000614319 87 ntBASIC19.55■□□□□ 0.72
TTC9CQ8N5M4 AL449106.1-201ENST00000608517 1980 ntBASIC19.55■□□□□ 0.72
TTC9CQ8N5M4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TTC9CQ8N5M4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC9CQ8N5M4 MIR219A2-201ENST00000608502 1504 ntBASIC19.55■□□□□ 0.72
TTC9CQ8N5M4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC9CQ8N5M4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TTC9CQ8N5M4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TTC9CQ8N5M4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TTC9CQ8N5M4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TTC9CQ8N5M4 HLA-V-202ENST00000446817 847 ntBASIC19.54■□□□□ 0.72
TTC9CQ8N5M4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TTC9CQ8N5M4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TTC9CQ8N5M4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TTC9CQ8N5M4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TTC9CQ8N5M4 AC016575.1-201ENST00000607026 382 ntBASIC19.53■□□□□ 0.72
TTC9CQ8N5M4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.53■□□□□ 0.72
TTC9CQ8N5M4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.53■□□□□ 0.72
TTC9CQ8N5M4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TTC9CQ8N5M4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TTC9CQ8N5M4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TTC9CQ8N5M4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TTC9CQ8N5M4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TTC9CQ8N5M4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
TTC9CQ8N5M4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.52■□□□□ 0.72
TTC9CQ8N5M4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.52■□□□□ 0.71
TTC9CQ8N5M4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC9CQ8N5M4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC9CQ8N5M4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms