Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CDHR3Q6ZTQ4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDHR3Q6ZTQ4 WHAMMP2-203ENST00000563942 1603 ntBASIC25.04■■□□□ 1.6
CDHR3Q6ZTQ4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDHR3Q6ZTQ4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.03■■□□□ 1.6
CDHR3Q6ZTQ4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CDHR3Q6ZTQ4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDHR3Q6ZTQ4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CDHR3Q6ZTQ4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDHR3Q6ZTQ4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDHR3Q6ZTQ4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.02■■□□□ 1.6
CDHR3Q6ZTQ4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.01■■□□□ 1.59
CDHR3Q6ZTQ4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25■■□□□ 1.59
CDHR3Q6ZTQ4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CDHR3Q6ZTQ4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CDHR3Q6ZTQ4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25■■□□□ 1.59
CDHR3Q6ZTQ4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
CDHR3Q6ZTQ4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.98■■□□□ 1.59
CDHR3Q6ZTQ4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
CDHR3Q6ZTQ4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
CDHR3Q6ZTQ4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDHR3Q6ZTQ4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDHR3Q6ZTQ4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.97■■□□□ 1.59
CDHR3Q6ZTQ4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.97■■□□□ 1.59
CDHR3Q6ZTQ4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
CDHR3Q6ZTQ4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
CDHR3Q6ZTQ4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDHR3Q6ZTQ4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
CDHR3Q6ZTQ4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDHR3Q6ZTQ4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDHR3Q6ZTQ4 LINC01971-201ENST00000617888 1048 ntBASIC24.96■■□□□ 1.59
CDHR3Q6ZTQ4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
CDHR3Q6ZTQ4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CDHR3Q6ZTQ4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.95■■□□□ 1.58
CDHR3Q6ZTQ4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.95■■□□□ 1.58
CDHR3Q6ZTQ4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.95■■□□□ 1.58
CDHR3Q6ZTQ4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDHR3Q6ZTQ4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDHR3Q6ZTQ4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.94■■□□□ 1.58
CDHR3Q6ZTQ4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
CDHR3Q6ZTQ4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.93■■□□□ 1.58
CDHR3Q6ZTQ4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.93■■□□□ 1.58
CDHR3Q6ZTQ4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDHR3Q6ZTQ4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
CDHR3Q6ZTQ4 DUX4L11-201ENST00000611504 1267 ntBASIC24.92■■□□□ 1.58
CDHR3Q6ZTQ4 DUX4L12-201ENST00000614593 1267 ntBASIC24.92■■□□□ 1.58
CDHR3Q6ZTQ4 DUX4L14-201ENST00000621227 1267 ntBASIC24.92■■□□□ 1.58
CDHR3Q6ZTQ4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CDHR3Q6ZTQ4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CDHR3Q6ZTQ4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.91■■□□□ 1.58
CDHR3Q6ZTQ4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.91■■□□□ 1.58
CDHR3Q6ZTQ4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
CDHR3Q6ZTQ4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.9■■□□□ 1.58
CDHR3Q6ZTQ4 HLA-V-202ENST00000446817 847 ntBASIC24.9■■□□□ 1.58
CDHR3Q6ZTQ4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.9■■□□□ 1.58
CDHR3Q6ZTQ4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.9■■□□□ 1.58
CDHR3Q6ZTQ4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
CDHR3Q6ZTQ4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CDHR3Q6ZTQ4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.88■■□□□ 1.57
CDHR3Q6ZTQ4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDHR3Q6ZTQ4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDHR3Q6ZTQ4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.88■■□□□ 1.57
CDHR3Q6ZTQ4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDHR3Q6ZTQ4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.87■■□□□ 1.57
CDHR3Q6ZTQ4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.87■■□□□ 1.57
CDHR3Q6ZTQ4 LINC00273-201ENST00000539813 1452 ntBASIC24.87■■□□□ 1.57
CDHR3Q6ZTQ4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.87■■□□□ 1.57
CDHR3Q6ZTQ4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDHR3Q6ZTQ4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDHR3Q6ZTQ4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDHR3Q6ZTQ4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDHR3Q6ZTQ4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
CDHR3Q6ZTQ4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.86■■□□□ 1.57
CDHR3Q6ZTQ4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.86■■□□□ 1.57
CDHR3Q6ZTQ4 AC145676.1-201ENST00000514988 2004 ntBASIC24.86■■□□□ 1.57
CDHR3Q6ZTQ4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.86■■□□□ 1.57
CDHR3Q6ZTQ4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.85■■□□□ 1.57
CDHR3Q6ZTQ4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CDHR3Q6ZTQ4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDHR3Q6ZTQ4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.85■■□□□ 1.57
CDHR3Q6ZTQ4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.85■■□□□ 1.57
CDHR3Q6ZTQ4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDHR3Q6ZTQ4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.85■■□□□ 1.57
CDHR3Q6ZTQ4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDHR3Q6ZTQ4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CDHR3Q6ZTQ4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
CDHR3Q6ZTQ4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CDHR3Q6ZTQ4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDHR3Q6ZTQ4 AC020928.2-201ENST00000588717 2197 ntBASIC24.84■■□□□ 1.57
CDHR3Q6ZTQ4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDHR3Q6ZTQ4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDHR3Q6ZTQ4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CDHR3Q6ZTQ4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CDHR3Q6ZTQ4 MIR3648-2-201ENST00000581792 180 ntBASIC24.83■■□□□ 1.57
CDHR3Q6ZTQ4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.83■■□□□ 1.57
CDHR3Q6ZTQ4 MIR3648-1-201ENST00000615959 180 ntBASIC24.83■■□□□ 1.57
CDHR3Q6ZTQ4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.83■■□□□ 1.57
CDHR3Q6ZTQ4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDHR3Q6ZTQ4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.56
CDHR3Q6ZTQ4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms