Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNX30Q5VWJ9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNX30Q5VWJ9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNX30Q5VWJ9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
SNX30Q5VWJ9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNX30Q5VWJ9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNX30Q5VWJ9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SNX30Q5VWJ9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.23■■□□□ 1.79
SNX30Q5VWJ9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SNX30Q5VWJ9 AC126177.7-201ENST00000547904 679 ntBASIC26.23■■□□□ 1.79
SNX30Q5VWJ9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SNX30Q5VWJ9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.23■■□□□ 1.79
SNX30Q5VWJ9 AC092296.2-201ENST00000589470 999 ntBASIC26.22■■□□□ 1.79
SNX30Q5VWJ9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SNX30Q5VWJ9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SNX30Q5VWJ9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SNX30Q5VWJ9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.21■■□□□ 1.79
SNX30Q5VWJ9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SNX30Q5VWJ9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SNX30Q5VWJ9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SNX30Q5VWJ9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.2■■□□□ 1.78
SNX30Q5VWJ9 AC018358.1-201ENST00000631079 1402 ntBASIC26.2■■□□□ 1.78
SNX30Q5VWJ9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.2■■□□□ 1.78
SNX30Q5VWJ9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNX30Q5VWJ9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNX30Q5VWJ9 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.18■■□□□ 1.78
SNX30Q5VWJ9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNX30Q5VWJ9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNX30Q5VWJ9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNX30Q5VWJ9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SNX30Q5VWJ9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
SNX30Q5VWJ9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
SNX30Q5VWJ9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
SNX30Q5VWJ9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SNX30Q5VWJ9 ABHD17AP5-201ENST00000580133 923 ntBASIC26.16■■□□□ 1.78
SNX30Q5VWJ9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
SNX30Q5VWJ9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
SNX30Q5VWJ9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
SNX30Q5VWJ9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNX30Q5VWJ9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SNX30Q5VWJ9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SNX30Q5VWJ9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SNX30Q5VWJ9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SNX30Q5VWJ9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SNX30Q5VWJ9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SNX30Q5VWJ9 ECEL1P2-201ENST00000461596 1295 ntBASIC26.14■■□□□ 1.78
SNX30Q5VWJ9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SNX30Q5VWJ9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNX30Q5VWJ9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.13■■□□□ 1.77
SNX30Q5VWJ9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNX30Q5VWJ9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.12■■□□□ 1.77
SNX30Q5VWJ9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNX30Q5VWJ9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.12■■□□□ 1.77
SNX30Q5VWJ9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNX30Q5VWJ9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNX30Q5VWJ9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SNX30Q5VWJ9 AL157400.5-201ENST00000507624 621 ntBASIC26.11■■□□□ 1.77
SNX30Q5VWJ9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNX30Q5VWJ9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.1■■□□□ 1.77
SNX30Q5VWJ9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNX30Q5VWJ9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNX30Q5VWJ9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.09■■□□□ 1.77
SNX30Q5VWJ9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SNX30Q5VWJ9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SNX30Q5VWJ9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
SNX30Q5VWJ9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SNX30Q5VWJ9 AL359258.2-201ENST00000564063 1566 ntBASIC26.08■■□□□ 1.77
SNX30Q5VWJ9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
SNX30Q5VWJ9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SNX30Q5VWJ9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.08■■□□□ 1.77
SNX30Q5VWJ9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SNX30Q5VWJ9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.07■■□□□ 1.76
SNX30Q5VWJ9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.07■■□□□ 1.76
SNX30Q5VWJ9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.07■■□□□ 1.76
SNX30Q5VWJ9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.07■■□□□ 1.76
SNX30Q5VWJ9 DRD5P2-201ENST00000421395 2012 ntBASIC26.07■■□□□ 1.76
SNX30Q5VWJ9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNX30Q5VWJ9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNX30Q5VWJ9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNX30Q5VWJ9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
SNX30Q5VWJ9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNX30Q5VWJ9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
SNX30Q5VWJ9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.05■■□□□ 1.76
SNX30Q5VWJ9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNX30Q5VWJ9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SNX30Q5VWJ9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.05■■□□□ 1.76
SNX30Q5VWJ9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.05■■□□□ 1.76
SNX30Q5VWJ9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNX30Q5VWJ9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNX30Q5VWJ9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.04■■□□□ 1.76
SNX30Q5VWJ9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SNX30Q5VWJ9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.03■■□□□ 1.76
SNX30Q5VWJ9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.03■■□□□ 1.76
SNX30Q5VWJ9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
SNX30Q5VWJ9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SNX30Q5VWJ9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
SNX30Q5VWJ9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SNX30Q5VWJ9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SNX30Q5VWJ9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
SNX30Q5VWJ9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms