Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KRTCAP3Q53RY4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
KRTCAP3Q53RY4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
KRTCAP3Q53RY4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
KRTCAP3Q53RY4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
KRTCAP3Q53RY4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.52■■□□□ 1.2
KRTCAP3Q53RY4 AC009831.1-201ENST00000580420 1582 ntBASIC22.52■■□□□ 1.2
KRTCAP3Q53RY4 AC129492.7-201ENST00000622992 756 ntBASIC22.52■■□□□ 1.2
KRTCAP3Q53RY4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
KRTCAP3Q53RY4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.51■■□□□ 1.19
KRTCAP3Q53RY4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.51■■□□□ 1.19
KRTCAP3Q53RY4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
KRTCAP3Q53RY4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KRTCAP3Q53RY4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KRTCAP3Q53RY4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KRTCAP3Q53RY4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.5■■□□□ 1.19
KRTCAP3Q53RY4 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.5■■□□□ 1.19
KRTCAP3Q53RY4 AL592293.1-201ENST00000502889 1188 ntBASIC22.5■■□□□ 1.19
KRTCAP3Q53RY4 AC025884.2-201ENST00000553429 711 ntBASIC22.5■■□□□ 1.19
KRTCAP3Q53RY4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KRTCAP3Q53RY4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.5■■□□□ 1.19
KRTCAP3Q53RY4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KRTCAP3Q53RY4 AL139393.2-201ENST00000608721 2025 ntBASIC22.5■■□□□ 1.19
KRTCAP3Q53RY4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
KRTCAP3Q53RY4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KRTCAP3Q53RY4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
KRTCAP3Q53RY4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
KRTCAP3Q53RY4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
KRTCAP3Q53RY4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.49■■□□□ 1.19
KRTCAP3Q53RY4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.49■■□□□ 1.19
KRTCAP3Q53RY4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KRTCAP3Q53RY4 AP002414.2-202ENST00000590929 1450 ntBASIC22.48■■□□□ 1.19
KRTCAP3Q53RY4 AC026202.3-201ENST00000600805 1127 ntBASIC22.48■■□□□ 1.19
KRTCAP3Q53RY4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
KRTCAP3Q53RY4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KRTCAP3Q53RY4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KRTCAP3Q53RY4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
KRTCAP3Q53RY4 RP9P-202ENST00000450133 1212 ntBASIC22.47■■□□□ 1.19
KRTCAP3Q53RY4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.47■■□□□ 1.19
KRTCAP3Q53RY4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.47■■□□□ 1.19
KRTCAP3Q53RY4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
KRTCAP3Q53RY4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
KRTCAP3Q53RY4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.46■■□□□ 1.19
KRTCAP3Q53RY4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.46■■□□□ 1.19
KRTCAP3Q53RY4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.46■■□□□ 1.19
KRTCAP3Q53RY4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
KRTCAP3Q53RY4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
KRTCAP3Q53RY4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC22.46■■□□□ 1.19
KRTCAP3Q53RY4 ABCB10P3-201ENST00000561950 2166 ntBASIC22.45■■□□□ 1.18
KRTCAP3Q53RY4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
KRTCAP3Q53RY4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.45■■□□□ 1.18
KRTCAP3Q53RY4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
KRTCAP3Q53RY4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
KRTCAP3Q53RY4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
KRTCAP3Q53RY4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
KRTCAP3Q53RY4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.44■■□□□ 1.18
KRTCAP3Q53RY4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
KRTCAP3Q53RY4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
KRTCAP3Q53RY4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.43■■□□□ 1.18
KRTCAP3Q53RY4 MIR3960-201ENST00000583311 91 ntBASIC22.43■■□□□ 1.18
KRTCAP3Q53RY4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
KRTCAP3Q53RY4 RARRES2P1-201ENST00000474487 481 ntBASIC22.42■■□□□ 1.18
KRTCAP3Q53RY4 DUX4L18-201ENST00000553347 1267 ntBASIC22.42■■□□□ 1.18
KRTCAP3Q53RY4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
KRTCAP3Q53RY4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.42■■□□□ 1.18
KRTCAP3Q53RY4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
KRTCAP3Q53RY4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
KRTCAP3Q53RY4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
KRTCAP3Q53RY4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
KRTCAP3Q53RY4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
KRTCAP3Q53RY4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.41■■□□□ 1.18
KRTCAP3Q53RY4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
KRTCAP3Q53RY4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
KRTCAP3Q53RY4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
KRTCAP3Q53RY4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
KRTCAP3Q53RY4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
KRTCAP3Q53RY4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KRTCAP3Q53RY4 AC093536.1-201ENST00000569153 554 ntBASIC22.4■■□□□ 1.18
KRTCAP3Q53RY4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC22.4■■□□□ 1.18
KRTCAP3Q53RY4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KRTCAP3Q53RY4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
KRTCAP3Q53RY4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KRTCAP3Q53RY4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.39■■□□□ 1.18
KRTCAP3Q53RY4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
KRTCAP3Q53RY4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
KRTCAP3Q53RY4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.39■■□□□ 1.17
KRTCAP3Q53RY4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
KRTCAP3Q53RY4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.38■■□□□ 1.17
KRTCAP3Q53RY4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
KRTCAP3Q53RY4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
KRTCAP3Q53RY4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
KRTCAP3Q53RY4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.38■■□□□ 1.17
KRTCAP3Q53RY4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
KRTCAP3Q53RY4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
KRTCAP3Q53RY4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.37■■□□□ 1.17
KRTCAP3Q53RY4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
KRTCAP3Q53RY4 RAP2CP1-202ENST00000605179 643 ntBASIC22.37■■□□□ 1.17
KRTCAP3Q53RY4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KRTCAP3Q53RY4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
KRTCAP3Q53RY4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms