Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCSMST1Q4G0I0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCSMST1Q4G0I0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.34■■□□□ 1.49
CCSMST1Q4G0I0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
CCSMST1Q4G0I0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCSMST1Q4G0I0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
CCSMST1Q4G0I0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
CCSMST1Q4G0I0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.33■■□□□ 1.48
CCSMST1Q4G0I0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCSMST1Q4G0I0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCSMST1Q4G0I0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCSMST1Q4G0I0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CCSMST1Q4G0I0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.32■■□□□ 1.48
CCSMST1Q4G0I0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.32■■□□□ 1.48
CCSMST1Q4G0I0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
CCSMST1Q4G0I0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.32■■□□□ 1.48
CCSMST1Q4G0I0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCSMST1Q4G0I0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.3■■□□□ 1.48
CCSMST1Q4G0I0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCSMST1Q4G0I0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.28■■□□□ 1.48
CCSMST1Q4G0I0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 MIR4449-201ENST00000578365 66 ntBASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCSMST1Q4G0I0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CCSMST1Q4G0I0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCSMST1Q4G0I0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CCSMST1Q4G0I0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.26■■□□□ 1.47
CCSMST1Q4G0I0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CCSMST1Q4G0I0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCSMST1Q4G0I0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
CCSMST1Q4G0I0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCSMST1Q4G0I0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.25■■□□□ 1.47
CCSMST1Q4G0I0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCSMST1Q4G0I0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCSMST1Q4G0I0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCSMST1Q4G0I0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCSMST1Q4G0I0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.24■■□□□ 1.47
CCSMST1Q4G0I0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.24■■□□□ 1.47
CCSMST1Q4G0I0 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.24■■□□□ 1.47
CCSMST1Q4G0I0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CCSMST1Q4G0I0 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.24■■□□□ 1.47
CCSMST1Q4G0I0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCSMST1Q4G0I0 AL121749.1-202ENST00000609313 2153 ntBASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCSMST1Q4G0I0 AL449106.1-201ENST00000608517 1980 ntBASIC24.22■■□□□ 1.47
CCSMST1Q4G0I0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
CCSMST1Q4G0I0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CCSMST1Q4G0I0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.21■■□□□ 1.47
CCSMST1Q4G0I0 WHAMMP3-201ENST00000611636 1609 ntBASIC24.21■■□□□ 1.47
CCSMST1Q4G0I0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
CCSMST1Q4G0I0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CCSMST1Q4G0I0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.2■■□□□ 1.46
CCSMST1Q4G0I0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
CCSMST1Q4G0I0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCSMST1Q4G0I0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CCSMST1Q4G0I0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCSMST1Q4G0I0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
CCSMST1Q4G0I0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CCSMST1Q4G0I0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CCSMST1Q4G0I0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.19■■□□□ 1.46
CCSMST1Q4G0I0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCSMST1Q4G0I0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CCSMST1Q4G0I0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCSMST1Q4G0I0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.18■■□□□ 1.46
CCSMST1Q4G0I0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CCSMST1Q4G0I0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCSMST1Q4G0I0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
CCSMST1Q4G0I0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCSMST1Q4G0I0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms