Protein–RNA interactions for Protein: Q16048

PMCHL1, Putative pro-MCH-like protein 1, humanhuman

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMCHL1Q16048 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PMCHL1Q16048 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PMCHL1Q16048 AC079834.2-201ENST00000609776 1949 ntBASIC18.33■□□□□ 0.53
PMCHL1Q16048 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.33■□□□□ 0.53
PMCHL1Q16048 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
PMCHL1Q16048 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PMCHL1Q16048 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PMCHL1Q16048 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PMCHL1Q16048 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PMCHL1Q16048 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.32■□□□□ 0.52
PMCHL1Q16048 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PMCHL1Q16048 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PMCHL1Q16048 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PMCHL1Q16048 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PMCHL1Q16048 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PMCHL1Q16048 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PMCHL1Q16048 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PMCHL1Q16048 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.3■□□□□ 0.52
PMCHL1Q16048 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PMCHL1Q16048 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PMCHL1Q16048 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PMCHL1Q16048 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PMCHL1Q16048 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PMCHL1Q16048 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PMCHL1Q16048 AC010864.1-201ENST00000609407 1511 ntBASIC18.28■□□□□ 0.52
PMCHL1Q16048 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMCHL1Q16048 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PMCHL1Q16048 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMCHL1Q16048 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PMCHL1Q16048 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMCHL1Q16048 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMCHL1Q16048 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMCHL1Q16048 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMCHL1Q16048 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PMCHL1Q16048 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PMCHL1Q16048 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.27■□□□□ 0.52
PMCHL1Q16048 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PMCHL1Q16048 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PMCHL1Q16048 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
PMCHL1Q16048 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PMCHL1Q16048 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.26■□□□□ 0.51
PMCHL1Q16048 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PMCHL1Q16048 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.26■□□□□ 0.51
PMCHL1Q16048 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PMCHL1Q16048 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PMCHL1Q16048 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.26■□□□□ 0.51
PMCHL1Q16048 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PMCHL1Q16048 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PMCHL1Q16048 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PMCHL1Q16048 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.25■□□□□ 0.51
PMCHL1Q16048 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PMCHL1Q16048 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PMCHL1Q16048 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.25■□□□□ 0.51
PMCHL1Q16048 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.25■□□□□ 0.51
PMCHL1Q16048 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PMCHL1Q16048 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PMCHL1Q16048 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
PMCHL1Q16048 CLDN5-201ENST00000403084 2357 ntBASIC18.24■□□□□ 0.51
PMCHL1Q16048 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PMCHL1Q16048 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.24■□□□□ 0.51
PMCHL1Q16048 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.24■□□□□ 0.51
PMCHL1Q16048 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PMCHL1Q16048 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PMCHL1Q16048 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
PMCHL1Q16048 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMCHL1Q16048 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PMCHL1Q16048 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMCHL1Q16048 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.23■□□□□ 0.51
PMCHL1Q16048 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.23■□□□□ 0.51
PMCHL1Q16048 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMCHL1Q16048 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.23■□□□□ 0.51
PMCHL1Q16048 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMCHL1Q16048 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMCHL1Q16048 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.23■□□□□ 0.51
PMCHL1Q16048 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PMCHL1Q16048 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMCHL1Q16048 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PMCHL1Q16048 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PMCHL1Q16048 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PMCHL1Q16048 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PMCHL1Q16048 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMCHL1Q16048 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.21■□□□□ 0.51
PMCHL1Q16048 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.21■□□□□ 0.51
PMCHL1Q16048 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMCHL1Q16048 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PMCHL1Q16048 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMCHL1Q16048 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PMCHL1Q16048 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PMCHL1Q16048 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
PMCHL1Q16048 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMCHL1Q16048 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PMCHL1Q16048 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
PMCHL1Q16048 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMCHL1Q16048 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PMCHL1Q16048 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMCHL1Q16048 DUSP8P4-201ENST00000399538 1761 ntBASIC18.19■□□□□ 0.5
PMCHL1Q16048 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMCHL1Q16048 AP004833.2-201ENST00000532228 1454 ntBASIC18.19■□□□□ 0.5
PMCHL1Q16048 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMCHL1Q16048 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms