Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.56■■□□□ 1.84
CLCN4P51793 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.56■■□□□ 1.84
CLCN4P51793 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CLCN4P51793 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.55■■□□□ 1.84
CLCN4P51793 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLCN4P51793 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLCN4P51793 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLCN4P51793 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLCN4P51793 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
CLCN4P51793 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
CLCN4P51793 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.54■■□□□ 1.84
CLCN4P51793 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.54■■□□□ 1.84
CLCN4P51793 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.54■■□□□ 1.84
CLCN4P51793 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CLCN4P51793 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
CLCN4P51793 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CLCN4P51793 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CLCN4P51793 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.53■■□□□ 1.84
CLCN4P51793 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.53■■□□□ 1.84
CLCN4P51793 DUX4L18-201ENST00000553347 1267 ntBASIC26.53■■□□□ 1.84
CLCN4P51793 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.53■■□□□ 1.84
CLCN4P51793 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.53■■□□□ 1.84
CLCN4P51793 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLCN4P51793 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
CLCN4P51793 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.52■■□□□ 1.84
CLCN4P51793 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CLCN4P51793 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.51■■□□□ 1.83
CLCN4P51793 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CLCN4P51793 AC026202.3-201ENST00000600805 1127 ntBASIC26.51■■□□□ 1.83
CLCN4P51793 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLCN4P51793 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CLCN4P51793 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.5■■□□□ 1.83
CLCN4P51793 AC025884.2-201ENST00000553429 711 ntBASIC26.5■■□□□ 1.83
CLCN4P51793 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLCN4P51793 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CLCN4P51793 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CLCN4P51793 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CLCN4P51793 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.49■■□□□ 1.83
CLCN4P51793 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.49■■□□□ 1.83
CLCN4P51793 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.49■■□□□ 1.83
CLCN4P51793 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CLCN4P51793 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.48■■□□□ 1.83
CLCN4P51793 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.47■■□□□ 1.83
CLCN4P51793 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
CLCN4P51793 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CLCN4P51793 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
CLCN4P51793 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CLCN4P51793 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.46■■□□□ 1.83
CLCN4P51793 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CLCN4P51793 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.46■■□□□ 1.83
CLCN4P51793 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.46■■□□□ 1.83
CLCN4P51793 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.46■■□□□ 1.83
CLCN4P51793 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
CLCN4P51793 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CLCN4P51793 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
CLCN4P51793 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
CLCN4P51793 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.45■■□□□ 1.82
CLCN4P51793 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CLCN4P51793 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CLCN4P51793 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
CLCN4P51793 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
CLCN4P51793 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.43■■□□□ 1.82
CLCN4P51793 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CLCN4P51793 RP9P-202ENST00000450133 1212 ntBASIC26.42■■□□□ 1.82
CLCN4P51793 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CLCN4P51793 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.42■■□□□ 1.82
CLCN4P51793 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
CLCN4P51793 ABCB10P1-201ENST00000614297 2181 ntBASIC26.41■■□□□ 1.82
CLCN4P51793 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CLCN4P51793 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.4■■□□□ 1.82
CLCN4P51793 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CLCN4P51793 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CLCN4P51793 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.4■■□□□ 1.82
CLCN4P51793 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.4■■□□□ 1.82
CLCN4P51793 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CLCN4P51793 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
CLCN4P51793 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
CLCN4P51793 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CLCN4P51793 DUX4L9-201ENST00000449051 1259 ntBASIC26.39■■□□□ 1.82
CLCN4P51793 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
CLCN4P51793 AC093536.1-201ENST00000569153 554 ntBASIC26.39■■□□□ 1.82
CLCN4P51793 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.81
CLCN4P51793 AL139393.2-201ENST00000608721 2025 ntBASIC26.38■■□□□ 1.81
CLCN4P51793 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.38■■□□□ 1.81
CLCN4P51793 RAP2CP1-202ENST00000605179 643 ntBASIC26.38■■□□□ 1.81
CLCN4P51793 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.38■■□□□ 1.81
CLCN4P51793 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
CLCN4P51793 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CLCN4P51793 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CLCN4P51793 ABCB10P3-201ENST00000561950 2166 ntBASIC26.37■■□□□ 1.81
CLCN4P51793 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
CLCN4P51793 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CLCN4P51793 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.36■■□□□ 1.81
CLCN4P51793 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CLCN4P51793 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
CLCN4P51793 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.35■■□□□ 1.81
CLCN4P51793 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
CLCN4P51793 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CLCN4P51793 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
CLCN4P51793 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms