Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.7■■■■□ 3.47
CLCN4P51793 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.21■■■■□ 3.39
CLCN4P51793 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
CLCN4P51793 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.67■■■■□ 3.3
CLCN4P51793 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
CLCN4P51793 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.33■■■■□ 3.25
CLCN4P51793 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CLCN4P51793 AL356512.1-201ENST00000607453 1739 ntBASIC35.09■■■■□ 3.21
CLCN4P51793 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.7■■■■□ 3.15
CLCN4P51793 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.52■■■■□ 3.12
CLCN4P51793 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.45■■■■□ 3.11
CLCN4P51793 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.4■■■■□ 3.1
CLCN4P51793 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.29■■■■□ 3.08
CLCN4P51793 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.24■■■■□ 3.07
CLCN4P51793 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.23■■■■□ 3.07
CLCN4P51793 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
CLCN4P51793 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.06■■■■□ 3.04
CLCN4P51793 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
CLCN4P51793 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.91■■■■□ 3.02
CLCN4P51793 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
CLCN4P51793 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.65■■■□□ 2.98
CLCN4P51793 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.61■■■□□ 2.97
CLCN4P51793 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
CLCN4P51793 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
CLCN4P51793 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
CLCN4P51793 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.5■■■□□ 2.95
CLCN4P51793 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.46■■■□□ 2.95
CLCN4P51793 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
CLCN4P51793 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.42■■■□□ 2.94
CLCN4P51793 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.33■■■□□ 2.93
CLCN4P51793 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
CLCN4P51793 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.09■■■□□ 2.89
CLCN4P51793 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CLCN4P51793 AC006077.2-201ENST00000623591 457 ntBASIC32.92■■■□□ 2.86
CLCN4P51793 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.9■■■□□ 2.86
CLCN4P51793 ZNRF2P1-201ENST00000441407 443 ntBASIC32.89■■■□□ 2.86
CLCN4P51793 AC015813.7-201ENST00000623294 581 ntBASIC32.85■■■□□ 2.85
CLCN4P51793 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.77■■■□□ 2.84
CLCN4P51793 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.68■■■□□ 2.82
CLCN4P51793 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
CLCN4P51793 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CLCN4P51793 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
CLCN4P51793 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CLCN4P51793 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.44■■■□□ 2.78
CLCN4P51793 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.44■■■□□ 2.78
CLCN4P51793 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
CLCN4P51793 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CLCN4P51793 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CLCN4P51793 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.25■■■□□ 2.75
CLCN4P51793 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.2■■■□□ 2.75
CLCN4P51793 AP002365.1-201ENST00000603448 772 ntBASIC32.08■■■□□ 2.73
CLCN4P51793 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.91■■■□□ 2.7
CLCN4P51793 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CLCN4P51793 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.87■■■□□ 2.69
CLCN4P51793 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.87■■■□□ 2.69
CLCN4P51793 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CLCN4P51793 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CLCN4P51793 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CLCN4P51793 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CLCN4P51793 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.79■■■□□ 2.68
CLCN4P51793 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CLCN4P51793 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.77■■■□□ 2.68
CLCN4P51793 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.75■■■□□ 2.67
CLCN4P51793 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
CLCN4P51793 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CLCN4P51793 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.72■■■□□ 2.67
CLCN4P51793 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.65■■■□□ 2.66
CLCN4P51793 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.64■■■□□ 2.66
CLCN4P51793 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CLCN4P51793 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CLCN4P51793 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.6■■■□□ 2.65
CLCN4P51793 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CLCN4P51793 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CLCN4P51793 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
CLCN4P51793 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
CLCN4P51793 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.52■■■□□ 2.64
CLCN4P51793 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.51■■■□□ 2.63
CLCN4P51793 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
CLCN4P51793 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.5■■■□□ 2.63
CLCN4P51793 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.48■■■□□ 2.63
CLCN4P51793 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.45■■■□□ 2.63
CLCN4P51793 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.62
CLCN4P51793 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CLCN4P51793 DYNLL1-208ENST00000550178 581 ntBASIC31.42■■■□□ 2.62
CLCN4P51793 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.41■■■□□ 2.62
CLCN4P51793 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CLCN4P51793 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.37■■■□□ 2.61
CLCN4P51793 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.37■■■□□ 2.61
CLCN4P51793 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CLCN4P51793 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
CLCN4P51793 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
CLCN4P51793 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.34■■■□□ 2.61
CLCN4P51793 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CLCN4P51793 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CLCN4P51793 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
CLCN4P51793 AL031258.1-201ENST00000623562 325 ntBASIC31.2■■■□□ 2.59
CLCN4P51793 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CLCN4P51793 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CLCN4P51793 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.13■■■□□ 2.57
CLCN4P51793 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms