Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KDM4BO94953 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDM4BO94953 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.63■■□□□ 1.05
KDM4BO94953 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDM4BO94953 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDM4BO94953 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.63■■□□□ 1.05
KDM4BO94953 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDM4BO94953 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDM4BO94953 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.63■■□□□ 1.05
KDM4BO94953 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
KDM4BO94953 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KDM4BO94953 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KDM4BO94953 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.62■■□□□ 1.05
KDM4BO94953 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
KDM4BO94953 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.61■■□□□ 1.05
KDM4BO94953 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
KDM4BO94953 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KDM4BO94953 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KDM4BO94953 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KDM4BO94953 LINC00273-201ENST00000539813 1452 ntBASIC21.6■■□□□ 1.05
KDM4BO94953 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.6■■□□□ 1.05
KDM4BO94953 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
KDM4BO94953 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
KDM4BO94953 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KDM4BO94953 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KDM4BO94953 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.59■■□□□ 1.05
KDM4BO94953 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
KDM4BO94953 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
KDM4BO94953 WHAMMP2-203ENST00000563942 1603 ntBASIC21.58■■□□□ 1.05
KDM4BO94953 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
KDM4BO94953 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
KDM4BO94953 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
KDM4BO94953 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.58■■□□□ 1.05
KDM4BO94953 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
KDM4BO94953 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
KDM4BO94953 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
KDM4BO94953 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.57■■□□□ 1.04
KDM4BO94953 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KDM4BO94953 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KDM4BO94953 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.57■■□□□ 1.04
KDM4BO94953 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.57■■□□□ 1.04
KDM4BO94953 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
KDM4BO94953 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KDM4BO94953 AC087741.3-201ENST00000624270 1347 ntBASIC21.55■■□□□ 1.04
KDM4BO94953 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KDM4BO94953 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KDM4BO94953 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KDM4BO94953 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.55■■□□□ 1.04
KDM4BO94953 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.55■■□□□ 1.04
KDM4BO94953 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KDM4BO94953 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.55■■□□□ 1.04
KDM4BO94953 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KDM4BO94953 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM4BO94953 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM4BO94953 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.54■■□□□ 1.04
KDM4BO94953 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
KDM4BO94953 AL162393.1-201ENST00000437852 946 ntBASIC21.53■■□□□ 1.04
KDM4BO94953 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
KDM4BO94953 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.53■■□□□ 1.04
KDM4BO94953 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KDM4BO94953 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KDM4BO94953 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KDM4BO94953 AC020928.2-201ENST00000588717 2197 ntBASIC21.52■■□□□ 1.04
KDM4BO94953 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
KDM4BO94953 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.52■■□□□ 1.04
KDM4BO94953 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.52■■□□□ 1.04
KDM4BO94953 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.52■■□□□ 1.03
KDM4BO94953 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KDM4BO94953 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KDM4BO94953 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.51■■□□□ 1.03
KDM4BO94953 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KDM4BO94953 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KDM4BO94953 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KDM4BO94953 AC018358.1-201ENST00000631079 1402 ntBASIC21.5■■□□□ 1.03
KDM4BO94953 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.5■■□□□ 1.03
KDM4BO94953 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.5■■□□□ 1.03
KDM4BO94953 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
KDM4BO94953 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
KDM4BO94953 AC145676.1-201ENST00000514988 2004 ntBASIC21.5■■□□□ 1.03
KDM4BO94953 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KDM4BO94953 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KDM4BO94953 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KDM4BO94953 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.49■■□□□ 1.03
KDM4BO94953 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.49■■□□□ 1.03
KDM4BO94953 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
KDM4BO94953 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
KDM4BO94953 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
KDM4BO94953 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.49■■□□□ 1.03
KDM4BO94953 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KDM4BO94953 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KDM4BO94953 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.48■■□□□ 1.03
KDM4BO94953 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.48■■□□□ 1.03
KDM4BO94953 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KDM4BO94953 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KDM4BO94953 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KDM4BO94953 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.47■■□□□ 1.03
KDM4BO94953 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KDM4BO94953 AC044849.2-201ENST00000606596 710 ntBASIC21.47■■□□□ 1.03
KDM4BO94953 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.47■■□□□ 1.03
KDM4BO94953 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms