Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
TBC1D3BA6NDS4 TSPY13P-201ENST00000338964 914 ntBASIC25.54■■□□□ 1.68
TBC1D3BA6NDS4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TBC1D3BA6NDS4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.54■■□□□ 1.68
TBC1D3BA6NDS4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.54■■□□□ 1.68
TBC1D3BA6NDS4 AC007029.1-201ENST00000604183 313 ntBASIC25.54■■□□□ 1.68
TBC1D3BA6NDS4 AP002414.2-202ENST00000590929 1450 ntBASIC25.53■■□□□ 1.68
TBC1D3BA6NDS4 SMPD5-203ENST00000639008 1464 ntBASIC25.53■■□□□ 1.68
TBC1D3BA6NDS4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.53■■□□□ 1.68
TBC1D3BA6NDS4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TBC1D3BA6NDS4 AC004987.1-201ENST00000428627 508 ntBASIC25.53■■□□□ 1.68
TBC1D3BA6NDS4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.53■■□□□ 1.68
TBC1D3BA6NDS4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TBC1D3BA6NDS4 ATP5G2P3-201ENST00000429083 425 ntBASIC25.51■■□□□ 1.67
TBC1D3BA6NDS4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.51■■□□□ 1.67
TBC1D3BA6NDS4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
TBC1D3BA6NDS4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
TBC1D3BA6NDS4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TBC1D3BA6NDS4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
TBC1D3BA6NDS4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TBC1D3BA6NDS4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.5■■□□□ 1.67
TBC1D3BA6NDS4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TBC1D3BA6NDS4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TBC1D3BA6NDS4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TBC1D3BA6NDS4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TBC1D3BA6NDS4 AC133552.2-201ENST00000619106 1032 ntBASIC25.48■■□□□ 1.67
TBC1D3BA6NDS4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TBC1D3BA6NDS4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TBC1D3BA6NDS4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.47■■□□□ 1.67
TBC1D3BA6NDS4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TBC1D3BA6NDS4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.47■■□□□ 1.67
TBC1D3BA6NDS4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TBC1D3BA6NDS4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TBC1D3BA6NDS4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TBC1D3BA6NDS4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TBC1D3BA6NDS4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
TBC1D3BA6NDS4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.47■■□□□ 1.67
TBC1D3BA6NDS4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TBC1D3BA6NDS4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
TBC1D3BA6NDS4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TBC1D3BA6NDS4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TBC1D3BA6NDS4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TBC1D3BA6NDS4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.46■■□□□ 1.67
TBC1D3BA6NDS4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TBC1D3BA6NDS4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TBC1D3BA6NDS4 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.46■■□□□ 1.67
TBC1D3BA6NDS4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TBC1D3BA6NDS4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
TBC1D3BA6NDS4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
TBC1D3BA6NDS4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
TBC1D3BA6NDS4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.44■■□□□ 1.66
TBC1D3BA6NDS4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.44■■□□□ 1.66
TBC1D3BA6NDS4 AC009831.1-201ENST00000580420 1582 ntBASIC25.44■■□□□ 1.66
TBC1D3BA6NDS4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TBC1D3BA6NDS4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.43■■□□□ 1.66
TBC1D3BA6NDS4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.43■■□□□ 1.66
TBC1D3BA6NDS4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.43■■□□□ 1.66
TBC1D3BA6NDS4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TBC1D3BA6NDS4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
TBC1D3BA6NDS4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TBC1D3BA6NDS4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TBC1D3BA6NDS4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TBC1D3BA6NDS4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TBC1D3BA6NDS4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TBC1D3BA6NDS4 AL592293.1-201ENST00000502889 1188 ntBASIC25.42■■□□□ 1.66
TBC1D3BA6NDS4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TBC1D3BA6NDS4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TBC1D3BA6NDS4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.41■■□□□ 1.66
TBC1D3BA6NDS4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.41■■□□□ 1.66
TBC1D3BA6NDS4 AC129492.7-201ENST00000622992 756 ntBASIC25.41■■□□□ 1.66
TBC1D3BA6NDS4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TBC1D3BA6NDS4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
TBC1D3BA6NDS4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TBC1D3BA6NDS4 AC025884.2-201ENST00000553429 711 ntBASIC25.4■■□□□ 1.66
TBC1D3BA6NDS4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.4■■□□□ 1.66
TBC1D3BA6NDS4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.4■■□□□ 1.66
TBC1D3BA6NDS4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
TBC1D3BA6NDS4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TBC1D3BA6NDS4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
TBC1D3BA6NDS4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
TBC1D3BA6NDS4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
TBC1D3BA6NDS4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TBC1D3BA6NDS4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
TBC1D3BA6NDS4 AC026202.3-201ENST00000600805 1127 ntBASIC25.38■■□□□ 1.65
TBC1D3BA6NDS4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TBC1D3BA6NDS4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.37■■□□□ 1.65
TBC1D3BA6NDS4 RP9P-202ENST00000450133 1212 ntBASIC25.37■■□□□ 1.65
TBC1D3BA6NDS4 DUX4L18-201ENST00000553347 1267 ntBASIC25.37■■□□□ 1.65
TBC1D3BA6NDS4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TBC1D3BA6NDS4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TBC1D3BA6NDS4 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.36■■□□□ 1.65
TBC1D3BA6NDS4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
TBC1D3BA6NDS4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TBC1D3BA6NDS4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
TBC1D3BA6NDS4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
TBC1D3BA6NDS4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TBC1D3BA6NDS4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
TBC1D3BA6NDS4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
TBC1D3BA6NDS4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TBC1D3BA6NDS4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms