Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC37.52■■■■□ 3.6
HFM1A2PYH4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC37.51■■■■□ 3.6
HFM1A2PYH4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC37.51■■■■□ 3.6
HFM1A2PYH4 AC022413.1-201ENST00000624602 984 ntBASIC37.51■■■■□ 3.59
HFM1A2PYH4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
HFM1A2PYH4 RNF126P1-201ENST00000567452 1320 ntBASIC37.5■■■■□ 3.59
HFM1A2PYH4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC37.49■■■■□ 3.59
HFM1A2PYH4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC37.49■■■■□ 3.59
HFM1A2PYH4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
HFM1A2PYH4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC37.49■■■■□ 3.59
HFM1A2PYH4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC37.48■■■■□ 3.59
HFM1A2PYH4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC37.48■■■■□ 3.59
HFM1A2PYH4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
HFM1A2PYH4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC37.47■■■■□ 3.59
HFM1A2PYH4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
HFM1A2PYH4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC37.46■■■■□ 3.59
HFM1A2PYH4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC37.45■■■■□ 3.59
HFM1A2PYH4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
HFM1A2PYH4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC37.43■■■■□ 3.58
HFM1A2PYH4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC37.42■■■■□ 3.58
HFM1A2PYH4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
HFM1A2PYH4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC37.42■■■■□ 3.58
HFM1A2PYH4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC37.42■■■■□ 3.58
HFM1A2PYH4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC37.41■■■■□ 3.58
HFM1A2PYH4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC37.41■■■■□ 3.58
HFM1A2PYH4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC37.41■■■■□ 3.58
HFM1A2PYH4 AC126177.7-201ENST00000547904 679 ntBASIC37.4■■■■□ 3.58
HFM1A2PYH4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC37.39■■■■□ 3.58
HFM1A2PYH4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC37.39■■■■□ 3.58
HFM1A2PYH4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC37.39■■■■□ 3.58
HFM1A2PYH4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC37.38■■■■□ 3.58
HFM1A2PYH4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
HFM1A2PYH4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC37.37■■■■□ 3.57
HFM1A2PYH4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC37.37■■■■□ 3.57
HFM1A2PYH4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
HFM1A2PYH4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC37.36■■■■□ 3.57
HFM1A2PYH4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC37.36■■■■□ 3.57
HFM1A2PYH4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC37.35■■■■□ 3.57
HFM1A2PYH4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC37.35■■■■□ 3.57
HFM1A2PYH4 LINC01003-201ENST00000564834 1764 ntBASIC37.35■■■■□ 3.57
HFM1A2PYH4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
HFM1A2PYH4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC37.34■■■■□ 3.57
HFM1A2PYH4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
HFM1A2PYH4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC37.33■■■■□ 3.57
HFM1A2PYH4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
HFM1A2PYH4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC37.33■■■■□ 3.57
HFM1A2PYH4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
HFM1A2PYH4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
HFM1A2PYH4 AL359258.2-201ENST00000564063 1566 ntBASIC37.32■■■■□ 3.57
HFM1A2PYH4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC37.32■■■■□ 3.57
HFM1A2PYH4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC37.32■■■■□ 3.56
HFM1A2PYH4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC37.32■■■■□ 3.56
HFM1A2PYH4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC37.31■■■■□ 3.56
HFM1A2PYH4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
HFM1A2PYH4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
HFM1A2PYH4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC37.3■■■■□ 3.56
HFM1A2PYH4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC37.3■■■■□ 3.56
HFM1A2PYH4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
HFM1A2PYH4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC37.28■■■■□ 3.56
HFM1A2PYH4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
HFM1A2PYH4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
HFM1A2PYH4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
HFM1A2PYH4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC37.28■■■■□ 3.56
HFM1A2PYH4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
HFM1A2PYH4 ABHD17AP5-201ENST00000580133 923 ntBASIC37.27■■■■□ 3.56
HFM1A2PYH4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC37.27■■■■□ 3.56
HFM1A2PYH4 ECEL1P2-201ENST00000461596 1295 ntBASIC37.27■■■■□ 3.56
HFM1A2PYH4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC37.26■■■■□ 3.56
HFM1A2PYH4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC37.26■■■■□ 3.56
HFM1A2PYH4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC37.26■■■■□ 3.56
HFM1A2PYH4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.55
HFM1A2PYH4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC37.25■■■■□ 3.55
HFM1A2PYH4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
HFM1A2PYH4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC37.25■■■■□ 3.55
HFM1A2PYH4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC37.25■■■■□ 3.55
HFM1A2PYH4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC37.24■■■■□ 3.55
HFM1A2PYH4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
HFM1A2PYH4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC37.24■■■■□ 3.55
HFM1A2PYH4 AC142086.6-201ENST00000621154 1765 ntBASIC37.24■■■■□ 3.55
HFM1A2PYH4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
HFM1A2PYH4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC37.23■■■■□ 3.55
HFM1A2PYH4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC37.23■■■■□ 3.55
HFM1A2PYH4 WHAMMP3-201ENST00000611636 1609 ntBASIC37.23■■■■□ 3.55
HFM1A2PYH4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
HFM1A2PYH4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC37.21■■■■□ 3.55
HFM1A2PYH4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC37.2■■■■□ 3.55
HFM1A2PYH4 AC025884.2-201ENST00000553429 711 ntBASIC37.2■■■■□ 3.55
HFM1A2PYH4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC37.19■■■■□ 3.54
HFM1A2PYH4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC37.19■■■■□ 3.54
HFM1A2PYH4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC37.19■■■■□ 3.54
HFM1A2PYH4 BX255925.1-201ENST00000566954 1854 ntBASIC37.18■■■■□ 3.54
HFM1A2PYH4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
HFM1A2PYH4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC37.18■■■■□ 3.54
HFM1A2PYH4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC37.17■■■■□ 3.54
HFM1A2PYH4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC37.17■■■■□ 3.54
HFM1A2PYH4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC37.17■■■■□ 3.54
HFM1A2PYH4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
HFM1A2PYH4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC37.15■■■■□ 3.54
HFM1A2PYH4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC37.15■■■■□ 3.54
HFM1A2PYH4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms