Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA9Q9Y5G4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGA9Q9Y5G4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGA9Q9Y5G4 AC092296.2-201ENST00000589470 999 ntBASIC23.52■■□□□ 1.36
PCDHGA9Q9Y5G4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.52■■□□□ 1.36
PCDHGA9Q9Y5G4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA9Q9Y5G4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA9Q9Y5G4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA9Q9Y5G4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PCDHGA9Q9Y5G4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA9Q9Y5G4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.51■■□□□ 1.35
PCDHGA9Q9Y5G4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA9Q9Y5G4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGA9Q9Y5G4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
PCDHGA9Q9Y5G4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGA9Q9Y5G4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.5■■□□□ 1.35
PCDHGA9Q9Y5G4 AL033527.3-201ENST00000566366 1196 ntBASIC23.5■■□□□ 1.35
PCDHGA9Q9Y5G4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA9Q9Y5G4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDHGA9Q9Y5G4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA9Q9Y5G4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA9Q9Y5G4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA9Q9Y5G4 ECEL1P2-201ENST00000461596 1295 ntBASIC23.48■■□□□ 1.35
PCDHGA9Q9Y5G4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
PCDHGA9Q9Y5G4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDHGA9Q9Y5G4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA9Q9Y5G4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.47■■□□□ 1.35
PCDHGA9Q9Y5G4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
PCDHGA9Q9Y5G4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA9Q9Y5G4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA9Q9Y5G4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
PCDHGA9Q9Y5G4 AC126177.7-201ENST00000547904 679 ntBASIC23.47■■□□□ 1.35
PCDHGA9Q9Y5G4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA9Q9Y5G4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
PCDHGA9Q9Y5G4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGA9Q9Y5G4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.46■■□□□ 1.35
PCDHGA9Q9Y5G4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGA9Q9Y5G4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGA9Q9Y5G4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.45■■□□□ 1.34
PCDHGA9Q9Y5G4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGA9Q9Y5G4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGA9Q9Y5G4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGA9Q9Y5G4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGA9Q9Y5G4 TSPY13P-201ENST00000338964 914 ntBASIC23.44■■□□□ 1.34
PCDHGA9Q9Y5G4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.44■■□□□ 1.34
PCDHGA9Q9Y5G4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGA9Q9Y5G4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGA9Q9Y5G4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.44■■□□□ 1.34
PCDHGA9Q9Y5G4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.44■■□□□ 1.34
PCDHGA9Q9Y5G4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGA9Q9Y5G4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGA9Q9Y5G4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.43■■□□□ 1.34
PCDHGA9Q9Y5G4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGA9Q9Y5G4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGA9Q9Y5G4 KRT18P60-201ENST00000312876 1297 ntBASIC23.41■■□□□ 1.34
PCDHGA9Q9Y5G4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.41■■□□□ 1.34
PCDHGA9Q9Y5G4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGA9Q9Y5G4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.4■■□□□ 1.34
PCDHGA9Q9Y5G4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGA9Q9Y5G4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.4■■□□□ 1.34
PCDHGA9Q9Y5G4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
PCDHGA9Q9Y5G4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.4■■□□□ 1.34
PCDHGA9Q9Y5G4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
PCDHGA9Q9Y5G4 ATP5G2P3-201ENST00000429083 425 ntBASIC23.39■■□□□ 1.33
PCDHGA9Q9Y5G4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.39■■□□□ 1.33
PCDHGA9Q9Y5G4 ST7-AS1-201ENST00000456775 1889 ntBASIC23.39■■□□□ 1.33
PCDHGA9Q9Y5G4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA9Q9Y5G4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
PCDHGA9Q9Y5G4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA9Q9Y5G4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
PCDHGA9Q9Y5G4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.38■■□□□ 1.33
PCDHGA9Q9Y5G4 AC004987.1-201ENST00000428627 508 ntBASIC23.38■■□□□ 1.33
PCDHGA9Q9Y5G4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDHGA9Q9Y5G4 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.37■■□□□ 1.33
PCDHGA9Q9Y5G4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGA9Q9Y5G4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA9Q9Y5G4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA9Q9Y5G4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA9Q9Y5G4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA9Q9Y5G4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHGA9Q9Y5G4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PCDHGA9Q9Y5G4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA9Q9Y5G4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA9Q9Y5G4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDHGA9Q9Y5G4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA9Q9Y5G4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA9Q9Y5G4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA9Q9Y5G4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA9Q9Y5G4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA9Q9Y5G4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.33■■□□□ 1.33
PCDHGA9Q9Y5G4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA9Q9Y5G4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA9Q9Y5G4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA9Q9Y5G4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA9Q9Y5G4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA9Q9Y5G4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA9Q9Y5G4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHGA9Q9Y5G4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA9Q9Y5G4 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDHGA9Q9Y5G4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms