Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
PCDHGB6Q9Y5F9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDHGB6Q9Y5F9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.58■■□□□ 1.37
PCDHGB6Q9Y5F9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDHGB6Q9Y5F9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDHGB6Q9Y5F9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
PCDHGB6Q9Y5F9 AL139393.2-201ENST00000608721 2025 ntBASIC23.57■■□□□ 1.36
PCDHGB6Q9Y5F9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGB6Q9Y5F9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGB6Q9Y5F9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGB6Q9Y5F9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGB6Q9Y5F9 AC008813.1-201ENST00000536597 885 ntBASIC23.57■■□□□ 1.36
PCDHGB6Q9Y5F9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGB6Q9Y5F9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHGB6Q9Y5F9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PCDHGB6Q9Y5F9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGB6Q9Y5F9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGB6Q9Y5F9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHGB6Q9Y5F9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDHGB6Q9Y5F9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGB6Q9Y5F9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGB6Q9Y5F9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGB6Q9Y5F9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDHGB6Q9Y5F9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGB6Q9Y5F9 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
PCDHGB6Q9Y5F9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGB6Q9Y5F9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGB6Q9Y5F9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PCDHGB6Q9Y5F9 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.51■■□□□ 1.35
PCDHGB6Q9Y5F9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGB6Q9Y5F9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHGB6Q9Y5F9 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGB6Q9Y5F9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGB6Q9Y5F9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
PCDHGB6Q9Y5F9 WHAMMP2-203ENST00000563942 1603 ntBASIC23.51■■□□□ 1.35
PCDHGB6Q9Y5F9 AL121749.1-202ENST00000609313 2153 ntBASIC23.51■■□□□ 1.35
PCDHGB6Q9Y5F9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGB6Q9Y5F9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
PCDHGB6Q9Y5F9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGB6Q9Y5F9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGB6Q9Y5F9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGB6Q9Y5F9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
PCDHGB6Q9Y5F9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGB6Q9Y5F9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGB6Q9Y5F9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
PCDHGB6Q9Y5F9 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGB6Q9Y5F9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGB6Q9Y5F9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDHGB6Q9Y5F9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
PCDHGB6Q9Y5F9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDHGB6Q9Y5F9 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGB6Q9Y5F9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDHGB6Q9Y5F9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGB6Q9Y5F9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGB6Q9Y5F9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGB6Q9Y5F9 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGB6Q9Y5F9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.46■■□□□ 1.35
PCDHGB6Q9Y5F9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.46■■□□□ 1.35
PCDHGB6Q9Y5F9 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.45■■□□□ 1.34
PCDHGB6Q9Y5F9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.45■■□□□ 1.34
PCDHGB6Q9Y5F9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGB6Q9Y5F9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGB6Q9Y5F9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGB6Q9Y5F9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.44■■□□□ 1.34
PCDHGB6Q9Y5F9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.44■■□□□ 1.34
PCDHGB6Q9Y5F9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
PCDHGB6Q9Y5F9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.44■■□□□ 1.34
PCDHGB6Q9Y5F9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGB6Q9Y5F9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGB6Q9Y5F9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGB6Q9Y5F9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.42■■□□□ 1.34
PCDHGB6Q9Y5F9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGB6Q9Y5F9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB6Q9Y5F9 GPX1-201ENST00000419349 1106 ntBASIC23.41■■□□□ 1.34
PCDHGB6Q9Y5F9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB6Q9Y5F9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
PCDHGB6Q9Y5F9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB6Q9Y5F9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
PCDHGB6Q9Y5F9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGB6Q9Y5F9 RNF126P1-201ENST00000567452 1320 ntBASIC23.39■■□□□ 1.34
PCDHGB6Q9Y5F9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGB6Q9Y5F9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGB6Q9Y5F9 RARRES2P2-201ENST00000394842 485 ntBASIC23.39■■□□□ 1.33
PCDHGB6Q9Y5F9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGB6Q9Y5F9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGB6Q9Y5F9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
PCDHGB6Q9Y5F9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGB6Q9Y5F9 AC110285.7-201ENST00000624417 1536 ntBASIC23.38■■□□□ 1.33
PCDHGB6Q9Y5F9 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGB6Q9Y5F9 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.38■■□□□ 1.33
PCDHGB6Q9Y5F9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
PCDHGB6Q9Y5F9 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.38■■□□□ 1.33
PCDHGB6Q9Y5F9 AC148477.6-201ENST00000623746 465 ntBASIC23.38■■□□□ 1.33
PCDHGB6Q9Y5F9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
PCDHGB6Q9Y5F9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGB6Q9Y5F9 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDHGB6Q9Y5F9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
PCDHGB6Q9Y5F9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGB6Q9Y5F9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGB6Q9Y5F9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms