Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SND1-IT1Q9HBX3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC16.69■□□□□ 0.26
SND1-IT1Q9HBX3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SND1-IT1Q9HBX3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SND1-IT1Q9HBX3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC16.69■□□□□ 0.26
SND1-IT1Q9HBX3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC16.69■□□□□ 0.26
SND1-IT1Q9HBX3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SND1-IT1Q9HBX3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SND1-IT1Q9HBX3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SND1-IT1Q9HBX3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SND1-IT1Q9HBX3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SND1-IT1Q9HBX3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SND1-IT1Q9HBX3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.67■□□□□ 0.26
SND1-IT1Q9HBX3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
SND1-IT1Q9HBX3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SND1-IT1Q9HBX3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SND1-IT1Q9HBX3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SND1-IT1Q9HBX3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SND1-IT1Q9HBX3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SND1-IT1Q9HBX3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SND1-IT1Q9HBX3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SND1-IT1Q9HBX3 AC020928.2-201ENST00000588717 2197 ntBASIC16.65■□□□□ 0.26
SND1-IT1Q9HBX3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SND1-IT1Q9HBX3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC16.65■□□□□ 0.26
SND1-IT1Q9HBX3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SND1-IT1Q9HBX3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SND1-IT1Q9HBX3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SND1-IT1Q9HBX3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC16.65■□□□□ 0.26
SND1-IT1Q9HBX3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SND1-IT1Q9HBX3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SND1-IT1Q9HBX3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC16.65■□□□□ 0.26
SND1-IT1Q9HBX3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SND1-IT1Q9HBX3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SND1-IT1Q9HBX3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SND1-IT1Q9HBX3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SND1-IT1Q9HBX3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
SND1-IT1Q9HBX3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SND1-IT1Q9HBX3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SND1-IT1Q9HBX3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SND1-IT1Q9HBX3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SND1-IT1Q9HBX3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SND1-IT1Q9HBX3 AC145676.1-201ENST00000514988 2004 ntBASIC16.63■□□□□ 0.25
SND1-IT1Q9HBX3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.63■□□□□ 0.25
SND1-IT1Q9HBX3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC16.63■□□□□ 0.25
SND1-IT1Q9HBX3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SND1-IT1Q9HBX3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC16.63■□□□□ 0.25
SND1-IT1Q9HBX3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC16.63■□□□□ 0.25
SND1-IT1Q9HBX3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC16.63■□□□□ 0.25
SND1-IT1Q9HBX3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC16.62■□□□□ 0.25
SND1-IT1Q9HBX3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SND1-IT1Q9HBX3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC16.62■□□□□ 0.25
SND1-IT1Q9HBX3 AC100797.4-201ENST00000631653 1827 ntBASIC16.61■□□□□ 0.25
SND1-IT1Q9HBX3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC16.61■□□□□ 0.25
SND1-IT1Q9HBX3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC16.61■□□□□ 0.25
SND1-IT1Q9HBX3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SND1-IT1Q9HBX3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.61■□□□□ 0.25
SND1-IT1Q9HBX3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SND1-IT1Q9HBX3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC16.6■□□□□ 0.25
SND1-IT1Q9HBX3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SND1-IT1Q9HBX3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SND1-IT1Q9HBX3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC16.6■□□□□ 0.25
SND1-IT1Q9HBX3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SND1-IT1Q9HBX3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SND1-IT1Q9HBX3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SND1-IT1Q9HBX3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC16.59■□□□□ 0.25
SND1-IT1Q9HBX3 RARRES2P7-201ENST00000567349 469 ntBASIC16.59■□□□□ 0.25
SND1-IT1Q9HBX3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SND1-IT1Q9HBX3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SND1-IT1Q9HBX3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SND1-IT1Q9HBX3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SND1-IT1Q9HBX3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SND1-IT1Q9HBX3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SND1-IT1Q9HBX3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
SND1-IT1Q9HBX3 SETD8P1-201ENST00000623146 1180 ntBASIC16.58■□□□□ 0.24
SND1-IT1Q9HBX3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SND1-IT1Q9HBX3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SND1-IT1Q9HBX3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SND1-IT1Q9HBX3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SND1-IT1Q9HBX3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SND1-IT1Q9HBX3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SND1-IT1Q9HBX3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.57■□□□□ 0.24
SND1-IT1Q9HBX3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SND1-IT1Q9HBX3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SND1-IT1Q9HBX3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SND1-IT1Q9HBX3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SND1-IT1Q9HBX3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SND1-IT1Q9HBX3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SND1-IT1Q9HBX3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SND1-IT1Q9HBX3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SND1-IT1Q9HBX3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.55■□□□□ 0.24
SND1-IT1Q9HBX3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC16.55■□□□□ 0.24
SND1-IT1Q9HBX3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SND1-IT1Q9HBX3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SND1-IT1Q9HBX3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SND1-IT1Q9HBX3 AP002414.2-202ENST00000590929 1450 ntBASIC16.54■□□□□ 0.24
SND1-IT1Q9HBX3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC16.54■□□□□ 0.24
SND1-IT1Q9HBX3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SND1-IT1Q9HBX3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SND1-IT1Q9HBX3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SND1-IT1Q9HBX3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms