Protein–RNA interactions for Protein: Q9H8X3

LINC00574, Putative uncharacterized protein LINC00574, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00574Q9H8X3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00574Q9H8X3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00574Q9H8X3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00574Q9H8X3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00574Q9H8X3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00574Q9H8X3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00574Q9H8X3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
LINC00574Q9H8X3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00574Q9H8X3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00574Q9H8X3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.69■□□□□ 0.9
LINC00574Q9H8X3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00574Q9H8X3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00574Q9H8X3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00574Q9H8X3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00574Q9H8X3 ABHD17AP4-201ENST00000411545 909 ntBASIC20.68■□□□□ 0.9
LINC00574Q9H8X3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00574Q9H8X3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.68■□□□□ 0.9
LINC00574Q9H8X3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
LINC00574Q9H8X3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00574Q9H8X3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00574Q9H8X3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
LINC00574Q9H8X3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00574Q9H8X3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00574Q9H8X3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00574Q9H8X3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00574Q9H8X3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00574Q9H8X3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.66■□□□□ 0.9
LINC00574Q9H8X3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LINC00574Q9H8X3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00574Q9H8X3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00574Q9H8X3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00574Q9H8X3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.65■□□□□ 0.9
LINC00574Q9H8X3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.65■□□□□ 0.9
LINC00574Q9H8X3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00574Q9H8X3 AL121749.1-202ENST00000609313 2153 ntBASIC20.65■□□□□ 0.9
LINC00574Q9H8X3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00574Q9H8X3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00574Q9H8X3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00574Q9H8X3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00574Q9H8X3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00574Q9H8X3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LINC00574Q9H8X3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.63■□□□□ 0.89
LINC00574Q9H8X3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.63■□□□□ 0.89
LINC00574Q9H8X3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LINC00574Q9H8X3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.62■□□□□ 0.89
LINC00574Q9H8X3 AC008813.1-201ENST00000536597 885 ntBASIC20.62■□□□□ 0.89
LINC00574Q9H8X3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00574Q9H8X3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LINC00574Q9H8X3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00574Q9H8X3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00574Q9H8X3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LINC00574Q9H8X3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINC00574Q9H8X3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
LINC00574Q9H8X3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LINC00574Q9H8X3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.6■□□□□ 0.89
LINC00574Q9H8X3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.6■□□□□ 0.89
LINC00574Q9H8X3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00574Q9H8X3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00574Q9H8X3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.59■□□□□ 0.89
LINC00574Q9H8X3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00574Q9H8X3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.59■□□□□ 0.89
LINC00574Q9H8X3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
LINC00574Q9H8X3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00574Q9H8X3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00574Q9H8X3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00574Q9H8X3 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.58■□□□□ 0.89
LINC00574Q9H8X3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.58■□□□□ 0.89
LINC00574Q9H8X3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.58■□□□□ 0.89
LINC00574Q9H8X3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LINC00574Q9H8X3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LINC00574Q9H8X3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
LINC00574Q9H8X3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00574Q9H8X3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.57■□□□□ 0.88
LINC00574Q9H8X3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
LINC00574Q9H8X3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.56■□□□□ 0.88
LINC00574Q9H8X3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00574Q9H8X3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.56■□□□□ 0.88
LINC00574Q9H8X3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
LINC00574Q9H8X3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00574Q9H8X3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.55■□□□□ 0.88
LINC00574Q9H8X3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00574Q9H8X3 AC148477.6-201ENST00000623746 465 ntBASIC20.55■□□□□ 0.88
LINC00574Q9H8X3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00574Q9H8X3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
LINC00574Q9H8X3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00574Q9H8X3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00574Q9H8X3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.54■□□□□ 0.88
LINC00574Q9H8X3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00574Q9H8X3 CR559946.2-201ENST00000623684 991 ntBASIC20.54■□□□□ 0.88
LINC00574Q9H8X3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LINC00574Q9H8X3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00574Q9H8X3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00574Q9H8X3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00574Q9H8X3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00574Q9H8X3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LINC00574Q9H8X3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.53■□□□□ 0.88
LINC00574Q9H8X3 MIR3648-2-201ENST00000581792 180 ntBASIC20.53■□□□□ 0.88
LINC00574Q9H8X3 MIR3648-1-201ENST00000615959 180 ntBASIC20.53■□□□□ 0.88
LINC00574Q9H8X3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.53■□□□□ 0.88
LINC00574Q9H8X3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms