Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SEH1LQ96EE3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.76■■□□□ 1.07
SEH1LQ96EE3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SEH1LQ96EE3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SEH1LQ96EE3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SEH1LQ96EE3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.76■■□□□ 1.07
SEH1LQ96EE3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SEH1LQ96EE3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SEH1LQ96EE3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SEH1LQ96EE3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.75■■□□□ 1.07
SEH1LQ96EE3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SEH1LQ96EE3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.73■■□□□ 1.07
SEH1LQ96EE3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SEH1LQ96EE3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SEH1LQ96EE3 AC021231.2-201ENST00000594613 730 ntBASIC21.73■■□□□ 1.07
SEH1LQ96EE3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
SEH1LQ96EE3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SEH1LQ96EE3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SEH1LQ96EE3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.71■■□□□ 1.07
SEH1LQ96EE3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SEH1LQ96EE3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SEH1LQ96EE3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SEH1LQ96EE3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SEH1LQ96EE3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SEH1LQ96EE3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SEH1LQ96EE3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SEH1LQ96EE3 DUX4L29-201ENST00000425409 679 ntBASIC21.69■■□□□ 1.06
SEH1LQ96EE3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SEH1LQ96EE3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.69■■□□□ 1.06
SEH1LQ96EE3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SEH1LQ96EE3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SEH1LQ96EE3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.68■■□□□ 1.06
SEH1LQ96EE3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SEH1LQ96EE3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SEH1LQ96EE3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEH1LQ96EE3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.68■■□□□ 1.06
SEH1LQ96EE3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEH1LQ96EE3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SEH1LQ96EE3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.67■■□□□ 1.06
SEH1LQ96EE3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.67■■□□□ 1.06
SEH1LQ96EE3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.67■■□□□ 1.06
SEH1LQ96EE3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.66■■□□□ 1.06
SEH1LQ96EE3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SEH1LQ96EE3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SEH1LQ96EE3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
SEH1LQ96EE3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SEH1LQ96EE3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SEH1LQ96EE3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SEH1LQ96EE3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SEH1LQ96EE3 WHAMMP2-203ENST00000563942 1603 ntBASIC21.66■■□□□ 1.06
SEH1LQ96EE3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SEH1LQ96EE3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SEH1LQ96EE3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.65■■□□□ 1.06
SEH1LQ96EE3 AC135983.2-203ENST00000454486 1613 ntBASIC21.65■■□□□ 1.06
SEH1LQ96EE3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.65■■□□□ 1.06
SEH1LQ96EE3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SEH1LQ96EE3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SEH1LQ96EE3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SEH1LQ96EE3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SEH1LQ96EE3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SEH1LQ96EE3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.64■■□□□ 1.05
SEH1LQ96EE3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.64■■□□□ 1.05
SEH1LQ96EE3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.64■■□□□ 1.05
SEH1LQ96EE3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SEH1LQ96EE3 AC100797.4-201ENST00000631653 1827 ntBASIC21.64■■□□□ 1.05
SEH1LQ96EE3 LINC00273-201ENST00000539813 1452 ntBASIC21.64■■□□□ 1.05
SEH1LQ96EE3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SEH1LQ96EE3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SEH1LQ96EE3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.62■■□□□ 1.05
SEH1LQ96EE3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SEH1LQ96EE3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SEH1LQ96EE3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SEH1LQ96EE3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.61■■□□□ 1.05
SEH1LQ96EE3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SEH1LQ96EE3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.61■■□□□ 1.05
SEH1LQ96EE3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SEH1LQ96EE3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SEH1LQ96EE3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.6■■□□□ 1.05
SEH1LQ96EE3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SEH1LQ96EE3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SEH1LQ96EE3 AC091060.1-201ENST00000623524 1766 ntBASIC21.6■■□□□ 1.05
SEH1LQ96EE3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SEH1LQ96EE3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SEH1LQ96EE3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SEH1LQ96EE3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SEH1LQ96EE3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SEH1LQ96EE3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SEH1LQ96EE3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SEH1LQ96EE3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SEH1LQ96EE3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms