Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DNAAF1Q8NEP3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DNAAF1Q8NEP3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DNAAF1Q8NEP3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DNAAF1Q8NEP3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.94■■□□□ 1.1
DNAAF1Q8NEP3 AC108673.1-201ENST00000510422 1159 ntBASIC21.94■■□□□ 1.1
DNAAF1Q8NEP3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DNAAF1Q8NEP3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DNAAF1Q8NEP3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DNAAF1Q8NEP3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
DNAAF1Q8NEP3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DNAAF1Q8NEP3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
DNAAF1Q8NEP3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DNAAF1Q8NEP3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DNAAF1Q8NEP3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
DNAAF1Q8NEP3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.92■■□□□ 1.1
DNAAF1Q8NEP3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DNAAF1Q8NEP3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.92■■□□□ 1.1
DNAAF1Q8NEP3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
DNAAF1Q8NEP3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DNAAF1Q8NEP3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DNAAF1Q8NEP3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.91■■□□□ 1.1
DNAAF1Q8NEP3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
DNAAF1Q8NEP3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
DNAAF1Q8NEP3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DNAAF1Q8NEP3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DNAAF1Q8NEP3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.9■■□□□ 1.1
DNAAF1Q8NEP3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.9■■□□□ 1.1
DNAAF1Q8NEP3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
DNAAF1Q8NEP3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
DNAAF1Q8NEP3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
DNAAF1Q8NEP3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.88■■□□□ 1.09
DNAAF1Q8NEP3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
DNAAF1Q8NEP3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
DNAAF1Q8NEP3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.87■■□□□ 1.09
DNAAF1Q8NEP3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DNAAF1Q8NEP3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DNAAF1Q8NEP3 MIR3665-201ENST00000578708 105 ntBASIC21.87■■□□□ 1.09
DNAAF1Q8NEP3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DNAAF1Q8NEP3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
DNAAF1Q8NEP3 AC091060.1-201ENST00000623524 1766 ntBASIC21.87■■□□□ 1.09
DNAAF1Q8NEP3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DNAAF1Q8NEP3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
DNAAF1Q8NEP3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.86■■□□□ 1.09
DNAAF1Q8NEP3 DUX4L28-201ENST00000623687 678 ntBASIC21.86■■□□□ 1.09
DNAAF1Q8NEP3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.86■■□□□ 1.09
DNAAF1Q8NEP3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.86■■□□□ 1.09
DNAAF1Q8NEP3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DNAAF1Q8NEP3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DNAAF1Q8NEP3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.85■■□□□ 1.09
DNAAF1Q8NEP3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.85■■□□□ 1.09
DNAAF1Q8NEP3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
DNAAF1Q8NEP3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DNAAF1Q8NEP3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
DNAAF1Q8NEP3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
DNAAF1Q8NEP3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
DNAAF1Q8NEP3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DNAAF1Q8NEP3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.84■■□□□ 1.09
DNAAF1Q8NEP3 AP006261.1-201ENST00000584783 668 ntBASIC21.84■■□□□ 1.09
DNAAF1Q8NEP3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.84■■□□□ 1.09
DNAAF1Q8NEP3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
DNAAF1Q8NEP3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DNAAF1Q8NEP3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
DNAAF1Q8NEP3 AC135983.2-203ENST00000454486 1613 ntBASIC21.83■■□□□ 1.08
DNAAF1Q8NEP3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
DNAAF1Q8NEP3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
DNAAF1Q8NEP3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DNAAF1Q8NEP3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DNAAF1Q8NEP3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DNAAF1Q8NEP3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DNAAF1Q8NEP3 MIR6090-201ENST00000622481 60 ntBASIC21.81■■□□□ 1.08
DNAAF1Q8NEP3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.8■■□□□ 1.08
DNAAF1Q8NEP3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DNAAF1Q8NEP3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DNAAF1Q8NEP3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DNAAF1Q8NEP3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DNAAF1Q8NEP3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
DNAAF1Q8NEP3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DNAAF1Q8NEP3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
DNAAF1Q8NEP3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
DNAAF1Q8NEP3 AC018358.1-201ENST00000631079 1402 ntBASIC21.79■■□□□ 1.08
DNAAF1Q8NEP3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
DNAAF1Q8NEP3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
DNAAF1Q8NEP3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DNAAF1Q8NEP3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.78■■□□□ 1.08
DNAAF1Q8NEP3 LINC00273-201ENST00000539813 1452 ntBASIC21.77■■□□□ 1.08
DNAAF1Q8NEP3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DNAAF1Q8NEP3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DNAAF1Q8NEP3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
DNAAF1Q8NEP3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DNAAF1Q8NEP3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
DNAAF1Q8NEP3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
DNAAF1Q8NEP3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DNAAF1Q8NEP3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.77■■□□□ 1.08
DNAAF1Q8NEP3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DNAAF1Q8NEP3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.77■■□□□ 1.08
DNAAF1Q8NEP3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DNAAF1Q8NEP3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.76■■□□□ 1.07
DNAAF1Q8NEP3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.76■■□□□ 1.07
DNAAF1Q8NEP3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms