Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRAM1L1Q8N609 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.04■■□□□ 1.6
TRAM1L1Q8N609 AC018358.1-201ENST00000631079 1402 ntBASIC25.04■■□□□ 1.6
TRAM1L1Q8N609 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRAM1L1Q8N609 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRAM1L1Q8N609 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
TRAM1L1Q8N609 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TRAM1L1Q8N609 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.04■■□□□ 1.6
TRAM1L1Q8N609 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
TRAM1L1Q8N609 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
TRAM1L1Q8N609 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
TRAM1L1Q8N609 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
TRAM1L1Q8N609 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.03■■□□□ 1.6
TRAM1L1Q8N609 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
TRAM1L1Q8N609 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.02■■□□□ 1.6
TRAM1L1Q8N609 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
TRAM1L1Q8N609 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.01■■□□□ 1.59
TRAM1L1Q8N609 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TRAM1L1Q8N609 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.01■■□□□ 1.59
TRAM1L1Q8N609 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
TRAM1L1Q8N609 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25■■□□□ 1.59
TRAM1L1Q8N609 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25■■□□□ 1.59
TRAM1L1Q8N609 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TRAM1L1Q8N609 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25■■□□□ 1.59
TRAM1L1Q8N609 AC142086.6-201ENST00000621154 1765 ntBASIC25■■□□□ 1.59
TRAM1L1Q8N609 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
TRAM1L1Q8N609 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
TRAM1L1Q8N609 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TRAM1L1Q8N609 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TRAM1L1Q8N609 MIR219A2-201ENST00000608502 1504 ntBASIC24.99■■□□□ 1.59
TRAM1L1Q8N609 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.98■■□□□ 1.59
TRAM1L1Q8N609 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRAM1L1Q8N609 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TRAM1L1Q8N609 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TRAM1L1Q8N609 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TRAM1L1Q8N609 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
TRAM1L1Q8N609 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TRAM1L1Q8N609 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TRAM1L1Q8N609 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRAM1L1Q8N609 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRAM1L1Q8N609 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRAM1L1Q8N609 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRAM1L1Q8N609 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TRAM1L1Q8N609 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRAM1L1Q8N609 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRAM1L1Q8N609 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TRAM1L1Q8N609 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TRAM1L1Q8N609 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TRAM1L1Q8N609 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TRAM1L1Q8N609 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TRAM1L1Q8N609 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TRAM1L1Q8N609 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TRAM1L1Q8N609 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
TRAM1L1Q8N609 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
TRAM1L1Q8N609 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
TRAM1L1Q8N609 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.94■■□□□ 1.58
TRAM1L1Q8N609 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
TRAM1L1Q8N609 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.93■■□□□ 1.58
TRAM1L1Q8N609 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.93■■□□□ 1.58
TRAM1L1Q8N609 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
TRAM1L1Q8N609 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.93■■□□□ 1.58
TRAM1L1Q8N609 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
TRAM1L1Q8N609 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.93■■□□□ 1.58
TRAM1L1Q8N609 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
TRAM1L1Q8N609 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.93■■□□□ 1.58
TRAM1L1Q8N609 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
TRAM1L1Q8N609 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
TRAM1L1Q8N609 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
TRAM1L1Q8N609 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TRAM1L1Q8N609 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.92■■□□□ 1.58
TRAM1L1Q8N609 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TRAM1L1Q8N609 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
TRAM1L1Q8N609 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.92■■□□□ 1.58
TRAM1L1Q8N609 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TRAM1L1Q8N609 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
TRAM1L1Q8N609 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.91■■□□□ 1.58
TRAM1L1Q8N609 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TRAM1L1Q8N609 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.9■■□□□ 1.58
TRAM1L1Q8N609 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.9■■□□□ 1.58
TRAM1L1Q8N609 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
TRAM1L1Q8N609 LINC01003-201ENST00000564834 1764 ntBASIC24.9■■□□□ 1.58
TRAM1L1Q8N609 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.89■■□□□ 1.58
TRAM1L1Q8N609 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.89■■□□□ 1.58
TRAM1L1Q8N609 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.89■■□□□ 1.58
TRAM1L1Q8N609 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
TRAM1L1Q8N609 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
TRAM1L1Q8N609 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TRAM1L1Q8N609 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.88■■□□□ 1.57
TRAM1L1Q8N609 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TRAM1L1Q8N609 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
TRAM1L1Q8N609 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.88■■□□□ 1.57
TRAM1L1Q8N609 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.88■■□□□ 1.57
TRAM1L1Q8N609 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
TRAM1L1Q8N609 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TRAM1L1Q8N609 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TRAM1L1Q8N609 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.87■■□□□ 1.57
TRAM1L1Q8N609 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TRAM1L1Q8N609 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
TRAM1L1Q8N609 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.86■■□□□ 1.57
TRAM1L1Q8N609 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 210.3 ms