Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCHD4Q6ZW05 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCHD4Q6ZW05 AP002414.2-202ENST00000590929 1450 ntBASIC22.98■■□□□ 1.27
PTCHD4Q6ZW05 AC005559.1-201ENST00000589661 871 ntBASIC22.97■■□□□ 1.27
PTCHD4Q6ZW05 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.97■■□□□ 1.27
PTCHD4Q6ZW05 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTCHD4Q6ZW05 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.97■■□□□ 1.27
PTCHD4Q6ZW05 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTCHD4Q6ZW05 AC091060.1-201ENST00000623524 1766 ntBASIC22.96■■□□□ 1.27
PTCHD4Q6ZW05 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCHD4Q6ZW05 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PTCHD4Q6ZW05 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
PTCHD4Q6ZW05 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.96■■□□□ 1.27
PTCHD4Q6ZW05 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.95■■□□□ 1.26
PTCHD4Q6ZW05 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
PTCHD4Q6ZW05 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PTCHD4Q6ZW05 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
PTCHD4Q6ZW05 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.95■■□□□ 1.26
PTCHD4Q6ZW05 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PTCHD4Q6ZW05 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
PTCHD4Q6ZW05 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PTCHD4Q6ZW05 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PTCHD4Q6ZW05 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PTCHD4Q6ZW05 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
PTCHD4Q6ZW05 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PTCHD4Q6ZW05 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCHD4Q6ZW05 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCHD4Q6ZW05 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCHD4Q6ZW05 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCHD4Q6ZW05 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCHD4Q6ZW05 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCHD4Q6ZW05 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PTCHD4Q6ZW05 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCHD4Q6ZW05 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
PTCHD4Q6ZW05 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PTCHD4Q6ZW05 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.91■■□□□ 1.26
PTCHD4Q6ZW05 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
PTCHD4Q6ZW05 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PTCHD4Q6ZW05 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PTCHD4Q6ZW05 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.9■■□□□ 1.26
PTCHD4Q6ZW05 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.9■■□□□ 1.26
PTCHD4Q6ZW05 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PTCHD4Q6ZW05 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PTCHD4Q6ZW05 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PTCHD4Q6ZW05 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
PTCHD4Q6ZW05 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PTCHD4Q6ZW05 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PTCHD4Q6ZW05 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
PTCHD4Q6ZW05 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
PTCHD4Q6ZW05 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PTCHD4Q6ZW05 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.89■■□□□ 1.25
PTCHD4Q6ZW05 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PTCHD4Q6ZW05 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
PTCHD4Q6ZW05 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.88■■□□□ 1.25
PTCHD4Q6ZW05 DUX4L28-201ENST00000623687 678 ntBASIC22.88■■□□□ 1.25
PTCHD4Q6ZW05 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PTCHD4Q6ZW05 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.87■■□□□ 1.25
PTCHD4Q6ZW05 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PTCHD4Q6ZW05 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.87■■□□□ 1.25
PTCHD4Q6ZW05 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PTCHD4Q6ZW05 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTCHD4Q6ZW05 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTCHD4Q6ZW05 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.85■■□□□ 1.25
PTCHD4Q6ZW05 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTCHD4Q6ZW05 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PTCHD4Q6ZW05 MIR6090-201ENST00000622481 60 ntBASIC22.84■■□□□ 1.25
PTCHD4Q6ZW05 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.83■■□□□ 1.25
PTCHD4Q6ZW05 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.83■■□□□ 1.24
PTCHD4Q6ZW05 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PTCHD4Q6ZW05 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PTCHD4Q6ZW05 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PTCHD4Q6ZW05 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
PTCHD4Q6ZW05 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCHD4Q6ZW05 AC108673.1-201ENST00000510422 1159 ntBASIC22.82■■□□□ 1.24
PTCHD4Q6ZW05 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.82■■□□□ 1.24
PTCHD4Q6ZW05 AC145676.1-201ENST00000514988 2004 ntBASIC22.82■■□□□ 1.24
PTCHD4Q6ZW05 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PTCHD4Q6ZW05 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCHD4Q6ZW05 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.81■■□□□ 1.24
PTCHD4Q6ZW05 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PTCHD4Q6ZW05 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.81■■□□□ 1.24
PTCHD4Q6ZW05 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.8■■□□□ 1.24
PTCHD4Q6ZW05 AC018358.1-201ENST00000631079 1402 ntBASIC22.8■■□□□ 1.24
PTCHD4Q6ZW05 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCHD4Q6ZW05 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCHD4Q6ZW05 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCHD4Q6ZW05 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.79■■□□□ 1.24
PTCHD4Q6ZW05 AC135983.2-203ENST00000454486 1613 ntBASIC22.79■■□□□ 1.24
PTCHD4Q6ZW05 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
PTCHD4Q6ZW05 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PTCHD4Q6ZW05 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.79■■□□□ 1.24
PTCHD4Q6ZW05 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
PTCHD4Q6ZW05 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
PTCHD4Q6ZW05 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
PTCHD4Q6ZW05 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
PTCHD4Q6ZW05 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.78■■□□□ 1.24
PTCHD4Q6ZW05 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.78■■□□□ 1.24
PTCHD4Q6ZW05 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PTCHD4Q6ZW05 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PTCHD4Q6ZW05 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms