Protein–RNA interactions for Protein: Q5VXH5

PRAMEF7, PRAME family member 7, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF7Q5VXH5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRAMEF7Q5VXH5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRAMEF7Q5VXH5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PRAMEF7Q5VXH5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.31■■□□□ 1.32
PRAMEF7Q5VXH5 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRAMEF7Q5VXH5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRAMEF7Q5VXH5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.3■■□□□ 1.32
PRAMEF7Q5VXH5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.3■■□□□ 1.32
PRAMEF7Q5VXH5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.3■■□□□ 1.32
PRAMEF7Q5VXH5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRAMEF7Q5VXH5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PRAMEF7Q5VXH5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PRAMEF7Q5VXH5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PRAMEF7Q5VXH5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PRAMEF7Q5VXH5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PRAMEF7Q5VXH5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PRAMEF7Q5VXH5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
PRAMEF7Q5VXH5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PRAMEF7Q5VXH5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PRAMEF7Q5VXH5 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PRAMEF7Q5VXH5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.28■■□□□ 1.32
PRAMEF7Q5VXH5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PRAMEF7Q5VXH5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PRAMEF7Q5VXH5 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRAMEF7Q5VXH5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRAMEF7Q5VXH5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRAMEF7Q5VXH5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRAMEF7Q5VXH5 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.26■■□□□ 1.31
PRAMEF7Q5VXH5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRAMEF7Q5VXH5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
PRAMEF7Q5VXH5 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRAMEF7Q5VXH5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.26■■□□□ 1.31
PRAMEF7Q5VXH5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRAMEF7Q5VXH5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PRAMEF7Q5VXH5 RPS2P35-201ENST00000443417 897 ntBASIC23.25■■□□□ 1.31
PRAMEF7Q5VXH5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRAMEF7Q5VXH5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
PRAMEF7Q5VXH5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PRAMEF7Q5VXH5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.24■■□□□ 1.31
PRAMEF7Q5VXH5 AC110285.7-201ENST00000624417 1536 ntBASIC23.23■■□□□ 1.31
PRAMEF7Q5VXH5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.22■■□□□ 1.31
PRAMEF7Q5VXH5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.22■■□□□ 1.31
PRAMEF7Q5VXH5 AC021231.2-201ENST00000594613 730 ntBASIC23.22■■□□□ 1.31
PRAMEF7Q5VXH5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.21■■□□□ 1.31
PRAMEF7Q5VXH5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRAMEF7Q5VXH5 DUX4L29-201ENST00000425409 679 ntBASIC23.21■■□□□ 1.31
PRAMEF7Q5VXH5 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PRAMEF7Q5VXH5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.21■■□□□ 1.31
PRAMEF7Q5VXH5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRAMEF7Q5VXH5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PRAMEF7Q5VXH5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PRAMEF7Q5VXH5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PRAMEF7Q5VXH5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.2■■□□□ 1.3
PRAMEF7Q5VXH5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PRAMEF7Q5VXH5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF7Q5VXH5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF7Q5VXH5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
PRAMEF7Q5VXH5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PRAMEF7Q5VXH5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.19■■□□□ 1.3
PRAMEF7Q5VXH5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF7Q5VXH5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF7Q5VXH5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF7Q5VXH5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
PRAMEF7Q5VXH5 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
PRAMEF7Q5VXH5 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.18■■□□□ 1.3
PRAMEF7Q5VXH5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PRAMEF7Q5VXH5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF7Q5VXH5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PRAMEF7Q5VXH5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.16■■□□□ 1.3
PRAMEF7Q5VXH5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PRAMEF7Q5VXH5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.16■■□□□ 1.3
PRAMEF7Q5VXH5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.15■■□□□ 1.3
PRAMEF7Q5VXH5 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF7Q5VXH5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF7Q5VXH5 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.14■■□□□ 1.29
PRAMEF7Q5VXH5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.14■■□□□ 1.29
PRAMEF7Q5VXH5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.13■■□□□ 1.29
PRAMEF7Q5VXH5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PRAMEF7Q5VXH5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
PRAMEF7Q5VXH5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PRAMEF7Q5VXH5 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRAMEF7Q5VXH5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.11■■□□□ 1.29
PRAMEF7Q5VXH5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRAMEF7Q5VXH5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRAMEF7Q5VXH5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF7Q5VXH5 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF7Q5VXH5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF7Q5VXH5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.1■■□□□ 1.29
PRAMEF7Q5VXH5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF7Q5VXH5 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF7Q5VXH5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF7Q5VXH5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF7Q5VXH5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.09■■□□□ 1.29
PRAMEF7Q5VXH5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.08■■□□□ 1.29
PRAMEF7Q5VXH5 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PRAMEF7Q5VXH5 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.08■■□□□ 1.29
PRAMEF7Q5VXH5 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.08■■□□□ 1.29
PRAMEF7Q5VXH5 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.08■■□□□ 1.29
PRAMEF7Q5VXH5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PRAMEF7Q5VXH5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.08■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms