Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC007029.1-201ENST00000604183 313 ntBASIC38.97■■■■□ 3.83
CDC42BPAQ5VT25 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC38.97■■■■□ 3.83
CDC42BPAQ5VT25 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC38.96■■■■□ 3.83
CDC42BPAQ5VT25 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC38.96■■■■□ 3.83
CDC42BPAQ5VT25 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
CDC42BPAQ5VT25 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC38.96■■■■□ 3.83
CDC42BPAQ5VT25 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC38.96■■■■□ 3.83
CDC42BPAQ5VT25 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC38.96■■■■□ 3.83
CDC42BPAQ5VT25 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC38.96■■■■□ 3.83
CDC42BPAQ5VT25 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
CDC42BPAQ5VT25 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
CDC42BPAQ5VT25 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC38.94■■■■□ 3.82
CDC42BPAQ5VT25 ST7-AS1-201ENST00000456775 1889 ntBASIC38.93■■■■□ 3.82
CDC42BPAQ5VT25 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC38.93■■■■□ 3.82
CDC42BPAQ5VT25 ATP5G2P3-201ENST00000429083 425 ntBASIC38.93■■■■□ 3.82
CDC42BPAQ5VT25 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
CDC42BPAQ5VT25 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC38.92■■■■□ 3.82
CDC42BPAQ5VT25 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
CDC42BPAQ5VT25 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC38.92■■■■□ 3.82
CDC42BPAQ5VT25 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC38.92■■■■□ 3.82
CDC42BPAQ5VT25 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC38.92■■■■□ 3.82
CDC42BPAQ5VT25 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
CDC42BPAQ5VT25 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
CDC42BPAQ5VT25 AC126177.7-201ENST00000547904 679 ntBASIC38.91■■■■□ 3.82
CDC42BPAQ5VT25 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC38.91■■■■□ 3.82
CDC42BPAQ5VT25 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
CDC42BPAQ5VT25 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC38.89■■■■□ 3.82
CDC42BPAQ5VT25 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC38.89■■■■□ 3.82
CDC42BPAQ5VT25 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
CDC42BPAQ5VT25 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC38.89■■■■□ 3.82
CDC42BPAQ5VT25 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
CDC42BPAQ5VT25 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
CDC42BPAQ5VT25 GUK1-208ENST00000366728 842 ntTSL 2 BASIC38.87■■■■□ 3.81
CDC42BPAQ5VT25 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
CDC42BPAQ5VT25 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
CDC42BPAQ5VT25 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC38.87■■■■□ 3.81
CDC42BPAQ5VT25 AC100797.4-201ENST00000631653 1827 ntBASIC38.86■■■■□ 3.81
CDC42BPAQ5VT25 RARRES2P1-201ENST00000474487 481 ntBASIC38.86■■■■□ 3.81
CDC42BPAQ5VT25 AP004833.2-201ENST00000532228 1454 ntBASIC38.85■■■■□ 3.81
CDC42BPAQ5VT25 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC38.85■■■■□ 3.81
CDC42BPAQ5VT25 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC38.85■■■■□ 3.81
CDC42BPAQ5VT25 AL592293.1-201ENST00000502889 1188 ntBASIC38.84■■■■□ 3.81
CDC42BPAQ5VT25 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
CDC42BPAQ5VT25 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
CDC42BPAQ5VT25 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
CDC42BPAQ5VT25 AC129492.7-201ENST00000622992 756 ntBASIC38.83■■■■□ 3.81
CDC42BPAQ5VT25 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC38.82■■■■□ 3.81
CDC42BPAQ5VT25 AC025884.2-201ENST00000553429 711 ntBASIC38.82■■■■□ 3.8
CDC42BPAQ5VT25 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC38.81■■■■□ 3.8
CDC42BPAQ5VT25 AC009831.1-201ENST00000580420 1582 ntBASIC38.81■■■■□ 3.8
CDC42BPAQ5VT25 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC38.81■■■■□ 3.8
CDC42BPAQ5VT25 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC38.81■■■■□ 3.8
CDC42BPAQ5VT25 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC38.81■■■■□ 3.8
CDC42BPAQ5VT25 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC38.8■■■■□ 3.8
CDC42BPAQ5VT25 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
CDC42BPAQ5VT25 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC38.8■■■■□ 3.8
CDC42BPAQ5VT25 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC38.8■■■■□ 3.8
CDC42BPAQ5VT25 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
CDC42BPAQ5VT25 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC38.8■■■■□ 3.8
CDC42BPAQ5VT25 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC38.8■■■■□ 3.8
CDC42BPAQ5VT25 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC38.79■■■■□ 3.8
CDC42BPAQ5VT25 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC38.79■■■■□ 3.8
CDC42BPAQ5VT25 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC38.79■■■■□ 3.8
CDC42BPAQ5VT25 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC38.79■■■■□ 3.8
CDC42BPAQ5VT25 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC38.79■■■■□ 3.8
CDC42BPAQ5VT25 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC38.79■■■■□ 3.8
CDC42BPAQ5VT25 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
CDC42BPAQ5VT25 REST-210ENST00000638187 1334 ntTSL 5 BASIC38.77■■■■□ 3.8
CDC42BPAQ5VT25 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC38.77■■■■□ 3.8
CDC42BPAQ5VT25 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
CDC42BPAQ5VT25 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
CDC42BPAQ5VT25 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC38.76■■■■□ 3.79
CDC42BPAQ5VT25 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
CDC42BPAQ5VT25 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC38.73■■■■□ 3.79
CDC42BPAQ5VT25 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC38.73■■■■□ 3.79
CDC42BPAQ5VT25 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC38.72■■■■□ 3.79
CDC42BPAQ5VT25 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
CDC42BPAQ5VT25 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
CDC42BPAQ5VT25 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC38.69■■■■□ 3.78
CDC42BPAQ5VT25 HES4-204ENST00000484667 667 ntTSL 3 BASIC38.69■■■■□ 3.78
CDC42BPAQ5VT25 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC38.67■■■■□ 3.78
CDC42BPAQ5VT25 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC38.66■■■■□ 3.78
CDC42BPAQ5VT25 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC38.66■■■■□ 3.78
CDC42BPAQ5VT25 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC38.66■■■■□ 3.78
CDC42BPAQ5VT25 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
CDC42BPAQ5VT25 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC38.65■■■■□ 3.78
CDC42BPAQ5VT25 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
CDC42BPAQ5VT25 AC133552.2-201ENST00000619106 1032 ntBASIC38.64■■■■□ 3.78
CDC42BPAQ5VT25 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC38.64■■■■□ 3.78
CDC42BPAQ5VT25 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC38.64■■■■□ 3.78
CDC42BPAQ5VT25 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC38.63■■■■□ 3.78
CDC42BPAQ5VT25 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC38.63■■■■□ 3.78
CDC42BPAQ5VT25 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC38.63■■■■□ 3.78
CDC42BPAQ5VT25 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC38.62■■■■□ 3.77
CDC42BPAQ5VT25 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC38.61■■■■□ 3.77
CDC42BPAQ5VT25 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
CDC42BPAQ5VT25 AL451085.2-201ENST00000605085 799 ntBASIC38.61■■■■□ 3.77
CDC42BPAQ5VT25 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC38.61■■■■□ 3.77
CDC42BPAQ5VT25 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC38.6■■■■□ 3.77
CDC42BPAQ5VT25 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC38.6■■■■□ 3.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms