Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.73■■□□□ 1.23
KRTCAP3Q53RY4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
KRTCAP3Q53RY4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
KRTCAP3Q53RY4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
KRTCAP3Q53RY4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
KRTCAP3Q53RY4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
KRTCAP3Q53RY4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
KRTCAP3Q53RY4 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.71■■□□□ 1.23
KRTCAP3Q53RY4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.71■■□□□ 1.23
KRTCAP3Q53RY4 TSPY13P-201ENST00000338964 914 ntBASIC22.7■■□□□ 1.22
KRTCAP3Q53RY4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
KRTCAP3Q53RY4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
KRTCAP3Q53RY4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.69■■□□□ 1.22
KRTCAP3Q53RY4 KRT18P60-201ENST00000312876 1297 ntBASIC22.69■■□□□ 1.22
KRTCAP3Q53RY4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
KRTCAP3Q53RY4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
KRTCAP3Q53RY4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.69■■□□□ 1.22
KRTCAP3Q53RY4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC22.69■■□□□ 1.22
KRTCAP3Q53RY4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
KRTCAP3Q53RY4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.68■■□□□ 1.22
KRTCAP3Q53RY4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.68■■□□□ 1.22
KRTCAP3Q53RY4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
KRTCAP3Q53RY4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.67■■□□□ 1.22
KRTCAP3Q53RY4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.67■■□□□ 1.22
KRTCAP3Q53RY4 AC100797.4-201ENST00000631653 1827 ntBASIC22.67■■□□□ 1.22
KRTCAP3Q53RY4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.67■■□□□ 1.22
KRTCAP3Q53RY4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.67■■□□□ 1.22
KRTCAP3Q53RY4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
KRTCAP3Q53RY4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KRTCAP3Q53RY4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
KRTCAP3Q53RY4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.66■■□□□ 1.22
KRTCAP3Q53RY4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KRTCAP3Q53RY4 ATP5G2P3-201ENST00000429083 425 ntBASIC22.65■■□□□ 1.22
KRTCAP3Q53RY4 AL157400.5-201ENST00000507624 621 ntBASIC22.65■■□□□ 1.22
KRTCAP3Q53RY4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
KRTCAP3Q53RY4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KRTCAP3Q53RY4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.65■■□□□ 1.22
KRTCAP3Q53RY4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
KRTCAP3Q53RY4 AC004987.1-201ENST00000428627 508 ntBASIC22.64■■□□□ 1.21
KRTCAP3Q53RY4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.64■■□□□ 1.21
KRTCAP3Q53RY4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.64■■□□□ 1.21
KRTCAP3Q53RY4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
KRTCAP3Q53RY4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
KRTCAP3Q53RY4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC22.63■■□□□ 1.21
KRTCAP3Q53RY4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.63■■□□□ 1.21
KRTCAP3Q53RY4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.63■■□□□ 1.21
KRTCAP3Q53RY4 AC007029.1-201ENST00000604183 313 ntBASIC22.63■■□□□ 1.21
KRTCAP3Q53RY4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRTCAP3Q53RY4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
KRTCAP3Q53RY4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.62■■□□□ 1.21
KRTCAP3Q53RY4 SMPD5-203ENST00000639008 1464 ntBASIC22.61■■□□□ 1.21
KRTCAP3Q53RY4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
KRTCAP3Q53RY4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KRTCAP3Q53RY4 AL359258.2-201ENST00000564063 1566 ntBASIC22.61■■□□□ 1.21
KRTCAP3Q53RY4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
KRTCAP3Q53RY4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
KRTCAP3Q53RY4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
KRTCAP3Q53RY4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
KRTCAP3Q53RY4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.6■■□□□ 1.21
KRTCAP3Q53RY4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
KRTCAP3Q53RY4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KRTCAP3Q53RY4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.6■■□□□ 1.21
KRTCAP3Q53RY4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
KRTCAP3Q53RY4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KRTCAP3Q53RY4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.6■■□□□ 1.21
KRTCAP3Q53RY4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.59■■□□□ 1.21
KRTCAP3Q53RY4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
KRTCAP3Q53RY4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KRTCAP3Q53RY4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
KRTCAP3Q53RY4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KRTCAP3Q53RY4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.59■■□□□ 1.21
KRTCAP3Q53RY4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
KRTCAP3Q53RY4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
KRTCAP3Q53RY4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22.58■■□□□ 1.2
KRTCAP3Q53RY4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22.58■■□□□ 1.2
KRTCAP3Q53RY4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.57■■□□□ 1.2
KRTCAP3Q53RY4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.57■■□□□ 1.2
KRTCAP3Q53RY4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
KRTCAP3Q53RY4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.57■■□□□ 1.2
KRTCAP3Q53RY4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KRTCAP3Q53RY4 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.57■■□□□ 1.2
KRTCAP3Q53RY4 AC133552.2-201ENST00000619106 1032 ntBASIC22.57■■□□□ 1.2
KRTCAP3Q53RY4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KRTCAP3Q53RY4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC22.56■■□□□ 1.2
KRTCAP3Q53RY4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KRTCAP3Q53RY4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
KRTCAP3Q53RY4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.56■■□□□ 1.2
KRTCAP3Q53RY4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
KRTCAP3Q53RY4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KRTCAP3Q53RY4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KRTCAP3Q53RY4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.55■■□□□ 1.2
KRTCAP3Q53RY4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
KRTCAP3Q53RY4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
KRTCAP3Q53RY4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KRTCAP3Q53RY4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
KRTCAP3Q53RY4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KRTCAP3Q53RY4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KRTCAP3Q53RY4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KRTCAP3Q53RY4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
KRTCAP3Q53RY4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms