Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
CCSMST1Q4G0I0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
CCSMST1Q4G0I0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCSMST1Q4G0I0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCSMST1Q4G0I0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCSMST1Q4G0I0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CCSMST1Q4G0I0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCSMST1Q4G0I0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCSMST1Q4G0I0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCSMST1Q4G0I0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
CCSMST1Q4G0I0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
CCSMST1Q4G0I0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCSMST1Q4G0I0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.56■■□□□ 1.52
CCSMST1Q4G0I0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.56■■□□□ 1.52
CCSMST1Q4G0I0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.55■■□□□ 1.52
CCSMST1Q4G0I0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCSMST1Q4G0I0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCSMST1Q4G0I0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
CCSMST1Q4G0I0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
CCSMST1Q4G0I0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.55■■□□□ 1.52
CCSMST1Q4G0I0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCSMST1Q4G0I0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
CCSMST1Q4G0I0 LINC01003-201ENST00000564834 1764 ntBASIC24.54■■□□□ 1.52
CCSMST1Q4G0I0 AC018358.1-201ENST00000631079 1402 ntBASIC24.53■■□□□ 1.52
CCSMST1Q4G0I0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.53■■□□□ 1.52
CCSMST1Q4G0I0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCSMST1Q4G0I0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCSMST1Q4G0I0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
CCSMST1Q4G0I0 HLA-V-202ENST00000446817 847 ntBASIC24.52■■□□□ 1.52
CCSMST1Q4G0I0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
CCSMST1Q4G0I0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCSMST1Q4G0I0 BX255925.1-201ENST00000566954 1854 ntBASIC24.51■■□□□ 1.51
CCSMST1Q4G0I0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.51■■□□□ 1.51
CCSMST1Q4G0I0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.51■■□□□ 1.51
CCSMST1Q4G0I0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.51■■□□□ 1.51
CCSMST1Q4G0I0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.51■■□□□ 1.51
CCSMST1Q4G0I0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CCSMST1Q4G0I0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCSMST1Q4G0I0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCSMST1Q4G0I0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.49■■□□□ 1.51
CCSMST1Q4G0I0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCSMST1Q4G0I0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCSMST1Q4G0I0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCSMST1Q4G0I0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CCSMST1Q4G0I0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CCSMST1Q4G0I0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCSMST1Q4G0I0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
CCSMST1Q4G0I0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.47■■□□□ 1.51
CCSMST1Q4G0I0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
CCSMST1Q4G0I0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CCSMST1Q4G0I0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCSMST1Q4G0I0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CCSMST1Q4G0I0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCSMST1Q4G0I0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCSMST1Q4G0I0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCSMST1Q4G0I0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
CCSMST1Q4G0I0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.45■■□□□ 1.5
CCSMST1Q4G0I0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCSMST1Q4G0I0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
CCSMST1Q4G0I0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.44■■□□□ 1.5
CCSMST1Q4G0I0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCSMST1Q4G0I0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
CCSMST1Q4G0I0 MIR639-201ENST00000384974 98 ntBASIC24.43■■□□□ 1.5
CCSMST1Q4G0I0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCSMST1Q4G0I0 AC008813.1-201ENST00000536597 885 ntBASIC24.43■■□□□ 1.5
CCSMST1Q4G0I0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCSMST1Q4G0I0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
CCSMST1Q4G0I0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.42■■□□□ 1.5
CCSMST1Q4G0I0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CCSMST1Q4G0I0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCSMST1Q4G0I0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCSMST1Q4G0I0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.41■■□□□ 1.5
CCSMST1Q4G0I0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCSMST1Q4G0I0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCSMST1Q4G0I0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCSMST1Q4G0I0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCSMST1Q4G0I0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCSMST1Q4G0I0 MIR219A2-201ENST00000608502 1504 ntBASIC24.4■■□□□ 1.5
CCSMST1Q4G0I0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.39■■□□□ 1.49
CCSMST1Q4G0I0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.39■■□□□ 1.49
CCSMST1Q4G0I0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
CCSMST1Q4G0I0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
CCSMST1Q4G0I0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCSMST1Q4G0I0 AC148477.6-201ENST00000623746 465 ntBASIC24.37■■□□□ 1.49
CCSMST1Q4G0I0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
CCSMST1Q4G0I0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCSMST1Q4G0I0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCSMST1Q4G0I0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCSMST1Q4G0I0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CCSMST1Q4G0I0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.35■■□□□ 1.49
CCSMST1Q4G0I0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCSMST1Q4G0I0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.35■■□□□ 1.49
CCSMST1Q4G0I0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCSMST1Q4G0I0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CCSMST1Q4G0I0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
CCSMST1Q4G0I0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
CCSMST1Q4G0I0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
CCSMST1Q4G0I0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCSMST1Q4G0I0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCSMST1Q4G0I0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms