Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.67■■□□□ 1.06
EFNB2P52799 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EFNB2P52799 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EFNB2P52799 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EFNB2P52799 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EFNB2P52799 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EFNB2P52799 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.66■■□□□ 1.06
EFNB2P52799 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
EFNB2P52799 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.65■■□□□ 1.06
EFNB2P52799 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
EFNB2P52799 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EFNB2P52799 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
EFNB2P52799 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EFNB2P52799 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EFNB2P52799 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EFNB2P52799 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
EFNB2P52799 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
EFNB2P52799 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
EFNB2P52799 MIR3665-201ENST00000578708 105 ntBASIC21.64■■□□□ 1.05
EFNB2P52799 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
EFNB2P52799 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.64■■□□□ 1.05
EFNB2P52799 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
EFNB2P52799 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
EFNB2P52799 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
EFNB2P52799 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EFNB2P52799 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.63■■□□□ 1.05
EFNB2P52799 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFNB2P52799 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
EFNB2P52799 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.62■■□□□ 1.05
EFNB2P52799 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFNB2P52799 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
EFNB2P52799 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.61■■□□□ 1.05
EFNB2P52799 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFNB2P52799 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.61■■□□□ 1.05
EFNB2P52799 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.61■■□□□ 1.05
EFNB2P52799 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFNB2P52799 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.6■■□□□ 1.05
EFNB2P52799 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
EFNB2P52799 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EFNB2P52799 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.59■■□□□ 1.05
EFNB2P52799 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
EFNB2P52799 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.59■■□□□ 1.05
EFNB2P52799 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
EFNB2P52799 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
EFNB2P52799 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
EFNB2P52799 AC018358.1-201ENST00000631079 1402 ntBASIC21.58■■□□□ 1.05
EFNB2P52799 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
EFNB2P52799 MIR762-201ENST00000390236 83 ntBASIC21.58■■□□□ 1.05
EFNB2P52799 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
EFNB2P52799 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
EFNB2P52799 AC020928.2-201ENST00000588717 2197 ntBASIC21.57■■□□□ 1.04
EFNB2P52799 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.57■■□□□ 1.04
EFNB2P52799 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EFNB2P52799 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
EFNB2P52799 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EFNB2P52799 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
EFNB2P52799 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
EFNB2P52799 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
EFNB2P52799 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.56■■□□□ 1.04
EFNB2P52799 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
EFNB2P52799 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
EFNB2P52799 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EFNB2P52799 AC145676.1-201ENST00000514988 2004 ntBASIC21.55■■□□□ 1.04
EFNB2P52799 DUX4L28-201ENST00000623687 678 ntBASIC21.55■■□□□ 1.04
EFNB2P52799 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
EFNB2P52799 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
EFNB2P52799 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.54■■□□□ 1.04
EFNB2P52799 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.54■■□□□ 1.04
EFNB2P52799 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
EFNB2P52799 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.53■■□□□ 1.04
EFNB2P52799 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
EFNB2P52799 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.53■■□□□ 1.04
EFNB2P52799 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
EFNB2P52799 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
EFNB2P52799 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
EFNB2P52799 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
EFNB2P52799 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.52■■□□□ 1.04
EFNB2P52799 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
EFNB2P52799 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
EFNB2P52799 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
EFNB2P52799 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.52■■□□□ 1.04
EFNB2P52799 AC087741.3-201ENST00000624270 1347 ntBASIC21.52■■□□□ 1.03
EFNB2P52799 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.52■■□□□ 1.03
EFNB2P52799 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
EFNB2P52799 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
EFNB2P52799 AC005559.1-201ENST00000589661 871 ntBASIC21.51■■□□□ 1.03
EFNB2P52799 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
EFNB2P52799 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EFNB2P52799 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.5■■□□□ 1.03
EFNB2P52799 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
EFNB2P52799 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.5■■□□□ 1.03
EFNB2P52799 AC135983.2-203ENST00000454486 1613 ntBASIC21.5■■□□□ 1.03
EFNB2P52799 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.5■■□□□ 1.03
EFNB2P52799 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
EFNB2P52799 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.49■■□□□ 1.03
EFNB2P52799 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.49■■□□□ 1.03
EFNB2P52799 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
EFNB2P52799 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EFNB2P52799 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.49■■□□□ 1.03
EFNB2P52799 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms