Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDKN1AP38936 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDKN1AP38936 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.5■■□□□ 1.03
CDKN1AP38936 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDKN1AP38936 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDKN1AP38936 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDKN1AP38936 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CDKN1AP38936 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDKN1AP38936 AC092296.2-201ENST00000589470 999 ntBASIC21.49■■□□□ 1.03
CDKN1AP38936 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDKN1AP38936 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDKN1AP38936 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDKN1AP38936 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDKN1AP38936 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CDKN1AP38936 AC126177.7-201ENST00000547904 679 ntBASIC21.48■■□□□ 1.03
CDKN1AP38936 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDKN1AP38936 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CDKN1AP38936 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.47■■□□□ 1.03
CDKN1AP38936 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDKN1AP38936 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.47■■□□□ 1.03
CDKN1AP38936 AC100797.4-201ENST00000631653 1827 ntBASIC21.47■■□□□ 1.03
CDKN1AP38936 AC018358.1-201ENST00000631079 1402 ntBASIC21.46■■□□□ 1.03
CDKN1AP38936 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDKN1AP38936 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CDKN1AP38936 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDKN1AP38936 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDKN1AP38936 AC139426.1-201ENST00000568218 2529 ntBASIC21.45■■□□□ 1.02
CDKN1AP38936 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDKN1AP38936 ECEL1P2-201ENST00000461596 1295 ntBASIC21.44■■□□□ 1.02
CDKN1AP38936 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDKN1AP38936 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDKN1AP38936 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.43■■□□□ 1.02
CDKN1AP38936 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDKN1AP38936 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDKN1AP38936 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CDKN1AP38936 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDKN1AP38936 AP004833.2-201ENST00000532228 1454 ntBASIC21.42■■□□□ 1.02
CDKN1AP38936 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CDKN1AP38936 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDKN1AP38936 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDKN1AP38936 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.41■■□□□ 1.02
CDKN1AP38936 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDKN1AP38936 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDKN1AP38936 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDKN1AP38936 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDKN1AP38936 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.4■■□□□ 1.02
CDKN1AP38936 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.4■■□□□ 1.02
CDKN1AP38936 KRT18P60-201ENST00000312876 1297 ntBASIC21.4■■□□□ 1.02
CDKN1AP38936 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.4■■□□□ 1.02
CDKN1AP38936 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDKN1AP38936 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.39■■□□□ 1.01
CDKN1AP38936 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.39■■□□□ 1.01
CDKN1AP38936 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.39■■□□□ 1.01
CDKN1AP38936 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDKN1AP38936 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDKN1AP38936 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
CDKN1AP38936 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDKN1AP38936 AL157400.5-201ENST00000507624 621 ntBASIC21.38■■□□□ 1.01
CDKN1AP38936 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDKN1AP38936 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDKN1AP38936 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDKN1AP38936 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.38■■□□□ 1.01
CDKN1AP38936 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDKN1AP38936 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
CDKN1AP38936 TSPY13P-201ENST00000338964 914 ntBASIC21.36■■□□□ 1.01
CDKN1AP38936 AC004987.1-201ENST00000428627 508 ntBASIC21.36■■□□□ 1.01
CDKN1AP38936 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.36■■□□□ 1.01
CDKN1AP38936 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.36■■□□□ 1.01
CDKN1AP38936 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.35■■□□□ 1.01
CDKN1AP38936 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDKN1AP38936 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.35■■□□□ 1.01
CDKN1AP38936 ATP5G2P3-201ENST00000429083 425 ntBASIC21.34■■□□□ 1.01
CDKN1AP38936 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDKN1AP38936 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDKN1AP38936 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDKN1AP38936 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDKN1AP38936 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.33■■□□□ 1.01
CDKN1AP38936 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.33■■□□□ 1.01
CDKN1AP38936 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDKN1AP38936 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CDKN1AP38936 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDKN1AP38936 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.33■■□□□ 1
CDKN1AP38936 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDKN1AP38936 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDKN1AP38936 AL359258.2-201ENST00000564063 1566 ntBASIC21.32■■□□□ 1
CDKN1AP38936 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.32■■□□□ 1
CDKN1AP38936 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDKN1AP38936 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDKN1AP38936 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.32■■□□□ 1
CDKN1AP38936 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.32■■□□□ 1
CDKN1AP38936 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.32■■□□□ 1
CDKN1AP38936 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CDKN1AP38936 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.31■■□□□ 1
CDKN1AP38936 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDKN1AP38936 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDKN1AP38936 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CDKN1AP38936 AC007029.1-201ENST00000604183 313 ntBASIC21.31■■□□□ 1
CDKN1AP38936 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.31■■□□□ 1
CDKN1AP38936 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.3■■□□□ 1
CDKN1AP38936 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms