Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
SNRPA1P09661 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC32.51■■■□□ 2.79
SNRPA1P09661 ECEL1P2-201ENST00000461596 1295 ntBASIC32.51■■■□□ 2.79
SNRPA1P09661 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
SNRPA1P09661 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC32.5■■■□□ 2.79
SNRPA1P09661 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC32.5■■■□□ 2.79
SNRPA1P09661 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC32.49■■■□□ 2.79
SNRPA1P09661 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
SNRPA1P09661 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
SNRPA1P09661 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
SNRPA1P09661 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
SNRPA1P09661 HYI-213ENST00000583037 1322 ntTSL 5 BASIC32.48■■■□□ 2.79
SNRPA1P09661 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
SNRPA1P09661 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SNRPA1P09661 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC32.47■■■□□ 2.79
SNRPA1P09661 U85056.1-201ENST00000616429 682 ntBASIC32.47■■■□□ 2.79
SNRPA1P09661 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
SNRPA1P09661 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC32.47■■■□□ 2.79
SNRPA1P09661 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
SNRPA1P09661 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SNRPA1P09661 ABCB10P3-201ENST00000561950 2166 ntBASIC32.46■■■□□ 2.79
SNRPA1P09661 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC32.46■■■□□ 2.79
SNRPA1P09661 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC32.45■■■□□ 2.79
SNRPA1P09661 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.78
SNRPA1P09661 MOB2-207ENST00000614710 705 ntTSL 5 BASIC32.44■■■□□ 2.78
SNRPA1P09661 AC012354.3-201ENST00000623734 483 ntBASIC32.44■■■□□ 2.78
SNRPA1P09661 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
SNRPA1P09661 ST7-205ENST00000393446 2114 ntTSL 5 BASIC32.43■■■□□ 2.78
SNRPA1P09661 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
SNRPA1P09661 AL157400.5-201ENST00000507624 621 ntBASIC32.43■■■□□ 2.78
SNRPA1P09661 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
SNRPA1P09661 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
SNRPA1P09661 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC32.42■■■□□ 2.78
SNRPA1P09661 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC32.42■■■□□ 2.78
SNRPA1P09661 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
SNRPA1P09661 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC32.42■■■□□ 2.78
SNRPA1P09661 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC32.42■■■□□ 2.78
SNRPA1P09661 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
SNRPA1P09661 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC32.41■■■□□ 2.78
SNRPA1P09661 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC32.41■■■□□ 2.78
SNRPA1P09661 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC32.41■■■□□ 2.78
SNRPA1P09661 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC32.4■■■□□ 2.78
SNRPA1P09661 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC32.4■■■□□ 2.78
SNRPA1P09661 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
SNRPA1P09661 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
SNRPA1P09661 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
SNRPA1P09661 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
SNRPA1P09661 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
SNRPA1P09661 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC32.39■■■□□ 2.78
SNRPA1P09661 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
SNRPA1P09661 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SNRPA1P09661 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC32.38■■■□□ 2.77
SNRPA1P09661 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SNRPA1P09661 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
SNRPA1P09661 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
SNRPA1P09661 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SNRPA1P09661 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SNRPA1P09661 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
SNRPA1P09661 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC32.37■■■□□ 2.77
SNRPA1P09661 ABCB10P1-201ENST00000614297 2181 ntBASIC32.36■■■□□ 2.77
SNRPA1P09661 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
SNRPA1P09661 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC32.36■■■□□ 2.77
SNRPA1P09661 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
SNRPA1P09661 AC018358.1-201ENST00000631079 1402 ntBASIC32.35■■■□□ 2.77
SNRPA1P09661 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
SNRPA1P09661 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
SNRPA1P09661 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC32.35■■■□□ 2.77
SNRPA1P09661 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC32.34■■■□□ 2.77
SNRPA1P09661 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
SNRPA1P09661 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC32.34■■■□□ 2.77
SNRPA1P09661 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC32.34■■■□□ 2.77
SNRPA1P09661 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
SNRPA1P09661 AP002414.2-202ENST00000590929 1450 ntBASIC32.33■■■□□ 2.77
SNRPA1P09661 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
SNRPA1P09661 AL359258.2-201ENST00000564063 1566 ntBASIC32.32■■■□□ 2.77
SNRPA1P09661 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
SNRPA1P09661 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
SNRPA1P09661 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
SNRPA1P09661 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC32.31■■■□□ 2.76
SNRPA1P09661 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SNRPA1P09661 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC32.3■■■□□ 2.76
SNRPA1P09661 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC32.29■■■□□ 2.76
SNRPA1P09661 KRT18P60-201ENST00000312876 1297 ntBASIC32.29■■■□□ 2.76
SNRPA1P09661 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC32.29■■■□□ 2.76
SNRPA1P09661 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
SNRPA1P09661 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
SNRPA1P09661 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
SNRPA1P09661 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC32.28■■■□□ 2.76
SNRPA1P09661 ST7-202ENST00000323984 2142 ntTSL 5 BASIC32.27■■■□□ 2.76
SNRPA1P09661 ST7-207ENST00000393449 2127 ntTSL 5 BASIC32.27■■■□□ 2.76
SNRPA1P09661 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
SNRPA1P09661 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SNRPA1P09661 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.76
SNRPA1P09661 AL033527.3-201ENST00000566366 1196 ntBASIC32.26■■■□□ 2.75
SNRPA1P09661 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC32.26■■■□□ 2.75
SNRPA1P09661 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
SNRPA1P09661 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
SNRPA1P09661 AC007029.1-201ENST00000604183 313 ntBASIC32.25■■■□□ 2.75
SNRPA1P09661 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
SNRPA1P09661 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC32.25■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms