Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.55■■□□□ 1.68
MMP2P08253 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.55■■□□□ 1.68
MMP2P08253 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.55■■□□□ 1.68
MMP2P08253 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
MMP2P08253 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.55■■□□□ 1.68
MMP2P08253 MIR3648-2-201ENST00000581792 180 ntBASIC25.55■■□□□ 1.68
MMP2P08253 MIR3648-1-201ENST00000615959 180 ntBASIC25.55■■□□□ 1.68
MMP2P08253 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
MMP2P08253 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
MMP2P08253 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
MMP2P08253 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
MMP2P08253 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
MMP2P08253 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
MMP2P08253 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.54■■□□□ 1.68
MMP2P08253 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
MMP2P08253 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
MMP2P08253 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.53■■□□□ 1.68
MMP2P08253 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.53■■□□□ 1.68
MMP2P08253 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
MMP2P08253 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
MMP2P08253 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
MMP2P08253 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
MMP2P08253 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
MMP2P08253 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
MMP2P08253 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.5■■□□□ 1.67
MMP2P08253 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
MMP2P08253 AC016575.1-201ENST00000607026 382 ntBASIC25.49■■□□□ 1.67
MMP2P08253 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
MMP2P08253 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
MMP2P08253 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
MMP2P08253 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
MMP2P08253 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.47■■□□□ 1.67
MMP2P08253 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
MMP2P08253 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
MMP2P08253 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
MMP2P08253 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MMP2P08253 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
MMP2P08253 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
MMP2P08253 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
MMP2P08253 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
MMP2P08253 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
MMP2P08253 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.44■■□□□ 1.66
MMP2P08253 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
MMP2P08253 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
MMP2P08253 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
MMP2P08253 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
MMP2P08253 HLA-V-202ENST00000446817 847 ntBASIC25.43■■□□□ 1.66
MMP2P08253 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
MMP2P08253 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.42■■□□□ 1.66
MMP2P08253 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
MMP2P08253 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
MMP2P08253 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
MMP2P08253 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
MMP2P08253 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
MMP2P08253 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
MMP2P08253 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.41■■□□□ 1.66
MMP2P08253 AC008813.1-201ENST00000536597 885 ntBASIC25.41■■□□□ 1.66
MMP2P08253 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.41■■□□□ 1.66
MMP2P08253 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
MMP2P08253 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.4■■□□□ 1.66
MMP2P08253 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.4■■□□□ 1.66
MMP2P08253 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.39■■□□□ 1.66
MMP2P08253 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.39■■□□□ 1.66
MMP2P08253 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
MMP2P08253 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
MMP2P08253 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
MMP2P08253 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.38■■□□□ 1.65
MMP2P08253 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
MMP2P08253 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
MMP2P08253 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
MMP2P08253 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
MMP2P08253 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.36■■□□□ 1.65
MMP2P08253 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
MMP2P08253 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
MMP2P08253 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
MMP2P08253 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
MMP2P08253 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
MMP2P08253 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.36■■□□□ 1.65
MMP2P08253 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
MMP2P08253 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
MMP2P08253 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
MMP2P08253 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
MMP2P08253 AC148477.6-201ENST00000623746 465 ntBASIC25.35■■□□□ 1.65
MMP2P08253 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
MMP2P08253 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
MMP2P08253 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
MMP2P08253 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.34■■□□□ 1.65
MMP2P08253 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.34■■□□□ 1.65
MMP2P08253 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
MMP2P08253 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
MMP2P08253 MIR219A2-201ENST00000608502 1504 ntBASIC25.33■■□□□ 1.65
MMP2P08253 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.33■■□□□ 1.65
MMP2P08253 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
MMP2P08253 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
MMP2P08253 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
MMP2P08253 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
MMP2P08253 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
MMP2P08253 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.32■■□□□ 1.64
MMP2P08253 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
MMP2P08253 MIR639-201ENST00000384974 98 ntBASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 274.8 ms