Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC32.76■■■□□ 2.83
PTCD1O75127 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
PTCD1O75127 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
PTCD1O75127 AL157400.5-201ENST00000507624 621 ntBASIC32.75■■■□□ 2.83
PTCD1O75127 AC126177.7-201ENST00000547904 679 ntBASIC32.75■■■□□ 2.83
PTCD1O75127 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
PTCD1O75127 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
PTCD1O75127 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC32.74■■■□□ 2.83
PTCD1O75127 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC32.73■■■□□ 2.83
PTCD1O75127 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
PTCD1O75127 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC32.73■■■□□ 2.83
PTCD1O75127 AC100797.4-201ENST00000631653 1827 ntBASIC32.72■■■□□ 2.83
PTCD1O75127 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
PTCD1O75127 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
PTCD1O75127 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC32.71■■■□□ 2.83
PTCD1O75127 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
PTCD1O75127 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
PTCD1O75127 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC32.71■■■□□ 2.83
PTCD1O75127 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
PTCD1O75127 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC32.71■■■□□ 2.83
PTCD1O75127 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC32.71■■■□□ 2.83
PTCD1O75127 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC32.7■■■□□ 2.83
PTCD1O75127 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC32.7■■■□□ 2.83
PTCD1O75127 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC32.69■■■□□ 2.82
PTCD1O75127 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
PTCD1O75127 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
PTCD1O75127 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
PTCD1O75127 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
PTCD1O75127 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC32.68■■■□□ 2.82
PTCD1O75127 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
PTCD1O75127 GUK1-208ENST00000366728 842 ntTSL 2 BASIC32.68■■■□□ 2.82
PTCD1O75127 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
PTCD1O75127 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
PTCD1O75127 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC32.67■■■□□ 2.82
PTCD1O75127 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
PTCD1O75127 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
PTCD1O75127 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
PTCD1O75127 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC32.66■■■□□ 2.82
PTCD1O75127 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC32.65■■■□□ 2.82
PTCD1O75127 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC32.64■■■□□ 2.82
PTCD1O75127 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
PTCD1O75127 AP004833.2-201ENST00000532228 1454 ntBASIC32.64■■■□□ 2.82
PTCD1O75127 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.81
PTCD1O75127 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
PTCD1O75127 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC32.63■■■□□ 2.81
PTCD1O75127 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC32.63■■■□□ 2.81
PTCD1O75127 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC32.63■■■□□ 2.81
PTCD1O75127 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC32.63■■■□□ 2.81
PTCD1O75127 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
PTCD1O75127 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PTCD1O75127 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PTCD1O75127 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC32.61■■■□□ 2.81
PTCD1O75127 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
PTCD1O75127 AC007029.1-201ENST00000604183 313 ntBASIC32.61■■■□□ 2.81
PTCD1O75127 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
PTCD1O75127 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC32.6■■■□□ 2.81
PTCD1O75127 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
PTCD1O75127 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
PTCD1O75127 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
PTCD1O75127 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
PTCD1O75127 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC32.59■■■□□ 2.81
PTCD1O75127 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
PTCD1O75127 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC32.59■■■□□ 2.81
PTCD1O75127 RARRES2P1-201ENST00000474487 481 ntBASIC32.58■■■□□ 2.81
PTCD1O75127 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC32.58■■■□□ 2.81
PTCD1O75127 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
PTCD1O75127 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
PTCD1O75127 AL359258.2-201ENST00000564063 1566 ntBASIC32.55■■■□□ 2.8
PTCD1O75127 AC009831.1-201ENST00000580420 1582 ntBASIC32.55■■■□□ 2.8
PTCD1O75127 AC129492.7-201ENST00000622992 756 ntBASIC32.55■■■□□ 2.8
PTCD1O75127 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC32.54■■■□□ 2.8
PTCD1O75127 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC32.54■■■□□ 2.8
PTCD1O75127 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
PTCD1O75127 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC32.54■■■□□ 2.8
PTCD1O75127 AC133552.2-201ENST00000619106 1032 ntBASIC32.54■■■□□ 2.8
PTCD1O75127 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
PTCD1O75127 AL592293.1-201ENST00000502889 1188 ntBASIC32.53■■■□□ 2.8
PTCD1O75127 DUX4L18-201ENST00000553347 1267 ntBASIC32.53■■■□□ 2.8
PTCD1O75127 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
PTCD1O75127 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC32.52■■■□□ 2.8
PTCD1O75127 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
PTCD1O75127 REST-210ENST00000638187 1334 ntTSL 5 BASIC32.51■■■□□ 2.8
PTCD1O75127 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC32.51■■■□□ 2.8
PTCD1O75127 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC32.51■■■□□ 2.79
PTCD1O75127 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC32.51■■■□□ 2.79
PTCD1O75127 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.79
PTCD1O75127 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC32.51■■■□□ 2.79
PTCD1O75127 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PTCD1O75127 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
PTCD1O75127 SMPD5-203ENST00000639008 1464 ntBASIC32.5■■■□□ 2.79
PTCD1O75127 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
PTCD1O75127 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
PTCD1O75127 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
PTCD1O75127 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
PTCD1O75127 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC32.49■■■□□ 2.79
PTCD1O75127 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC32.49■■■□□ 2.79
PTCD1O75127 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
PTCD1O75127 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
PTCD1O75127 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
PTCD1O75127 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms