Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCP4L1A6NKN8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCP4L1A6NKN8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCP4L1A6NKN8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCP4L1A6NKN8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCP4L1A6NKN8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCP4L1A6NKN8 PKD1P6-201ENST00000343738 4769 ntBASIC20.02■□□□□ 0.79
PCP4L1A6NKN8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCP4L1A6NKN8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCP4L1A6NKN8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCP4L1A6NKN8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCP4L1A6NKN8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCP4L1A6NKN8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCP4L1A6NKN8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCP4L1A6NKN8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20■□□□□ 0.79
PCP4L1A6NKN8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCP4L1A6NKN8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PCP4L1A6NKN8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCP4L1A6NKN8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PCP4L1A6NKN8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PCP4L1A6NKN8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCP4L1A6NKN8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCP4L1A6NKN8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCP4L1A6NKN8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCP4L1A6NKN8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCP4L1A6NKN8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.97■□□□□ 0.79
PCP4L1A6NKN8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PCP4L1A6NKN8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.97■□□□□ 0.79
PCP4L1A6NKN8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
PCP4L1A6NKN8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
PCP4L1A6NKN8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCP4L1A6NKN8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCP4L1A6NKN8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCP4L1A6NKN8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCP4L1A6NKN8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCP4L1A6NKN8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCP4L1A6NKN8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
PCP4L1A6NKN8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PCP4L1A6NKN8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.95■□□□□ 0.78
PCP4L1A6NKN8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCP4L1A6NKN8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCP4L1A6NKN8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCP4L1A6NKN8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCP4L1A6NKN8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCP4L1A6NKN8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCP4L1A6NKN8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCP4L1A6NKN8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCP4L1A6NKN8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCP4L1A6NKN8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCP4L1A6NKN8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCP4L1A6NKN8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCP4L1A6NKN8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCP4L1A6NKN8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCP4L1A6NKN8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
PCP4L1A6NKN8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCP4L1A6NKN8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCP4L1A6NKN8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCP4L1A6NKN8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PCP4L1A6NKN8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCP4L1A6NKN8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.91■□□□□ 0.78
PCP4L1A6NKN8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCP4L1A6NKN8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.91■□□□□ 0.78
PCP4L1A6NKN8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.91■□□□□ 0.78
PCP4L1A6NKN8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.91■□□□□ 0.78
PCP4L1A6NKN8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCP4L1A6NKN8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PCP4L1A6NKN8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCP4L1A6NKN8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCP4L1A6NKN8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCP4L1A6NKN8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PCP4L1A6NKN8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCP4L1A6NKN8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PCP4L1A6NKN8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCP4L1A6NKN8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCP4L1A6NKN8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCP4L1A6NKN8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCP4L1A6NKN8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCP4L1A6NKN8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCP4L1A6NKN8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCP4L1A6NKN8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCP4L1A6NKN8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PCP4L1A6NKN8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCP4L1A6NKN8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.88■□□□□ 0.77
PCP4L1A6NKN8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
PCP4L1A6NKN8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCP4L1A6NKN8 SLC25A24-204ENST00000569674 2357 ntBASIC19.87■□□□□ 0.77
PCP4L1A6NKN8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCP4L1A6NKN8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.87■□□□□ 0.77
PCP4L1A6NKN8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCP4L1A6NKN8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCP4L1A6NKN8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PCP4L1A6NKN8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCP4L1A6NKN8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCP4L1A6NKN8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCP4L1A6NKN8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCP4L1A6NKN8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PCP4L1A6NKN8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCP4L1A6NKN8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCP4L1A6NKN8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.85■□□□□ 0.77
PCP4L1A6NKN8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms