RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W DRS1P32892 752 aaKnown RBP7.64□□□□□ -1.19
MSD1YPL104W MTC1P47018 478 aaKnown RBP7.04□□□□□ -1.28
MSD1YPL104W BFR2Q06631 534 aaKnown RBP6.84□□□□□ -1.31
MSD1YPL104W TFA1P36100 482 aa6.77□□□□□ -1.33
MSD1YPL104W SGS1P35187 1447 aa6.49□□□□□ -1.37
MSD1YPL104W INO80P53115 1489 aa6.44□□□□□ -1.38
MSD1YPL104W TCB3Q03640 1545 aaKnown RBP6.36□□□□□ -1.39
MSD1YPL104W AVT3P36062 692 aa6.36□□□□□ -1.39
MSD1YPL104W MON2P48563 1636 aaPredicted RBP6.32□□□□□ -1.4
MSD1YPL104W DIP2Q12220 943 aaPredicted RBP6.31□□□□□ -1.4
MSD1YPL104W TY1B-DR4Q07793 1604 aa6.31□□□□□ -1.4
MSD1YPL104W RQC2Q12532 1038 aaKnown RBP6.29□□□□□ -1.4
MSD1YPL104W SPA2P23201 1466 aaKnown RBP6.25□□□□□ -1.41
MSD1YPL104W SSN2P38931 1420 aa6.2□□□□□ -1.42
MSD1YPL104W HSL1P34244 1518 aa6.18□□□□□ -1.42
MSD1YPL104W SWR1Q05471 1514 aa6.17□□□□□ -1.42
MSD1YPL104W SPT6P23615 1451 aaKnown RBP6.14□□□□□ -1.43
MSD1YPL104W HIR3P47171 1648 aa6.05□□□□□ -1.44
MSD1YPL104W XRN1P22147 1528 aaKnown RBP5.99□□□□□ -1.45
MSD1YPL104W KOG1P38873 1557 aa5.98□□□□□ -1.45
MSD1YPL104W DNA2P38859 1522 aa5.97□□□□□ -1.45
MSD1YPL104W REV3P14284 1504 aa5.93□□□□□ -1.46
MSD1YPL104W SIN3P22579 1536 aa5.91□□□□□ -1.46
MSD1YPL104W THO2P53552 1597 aaKnown RBP5.91□□□□□ -1.46
MSD1YPL104W SSK2P53599 1579 aa5.87□□□□□ -1.47
MSD1YPL104W BUD4P47136 1447 aa5.85□□□□□ -1.47
MSD1YPL104W DMA1P38823 416 aa5.83□□□□□ -1.48
MSD1YPL104W ATG2P53855 1592 aa5.82□□□□□ -1.48
MSD1YPL104W ESP1Q03018 1630 aa5.81□□□□□ -1.48
MSD1YPL104W TAF7Q05021 590 aa5.81□□□□□ -1.48
MSD1YPL104W MYO2P19524 1574 aaKnown RBP5.81□□□□□ -1.48
MSD1YPL104W RSE1Q04693 1361 aaKnown RBP5.8□□□□□ -1.48
MSD1YPL104W FAP1P53971 965 aa5.8□□□□□ -1.48
MSD1YPL104W TAF2P23255 1407 aa5.79□□□□□ -1.48
MSD1YPL104W ECM5Q03214 1411 aa5.79□□□□□ -1.48
MSD1YPL104W MDS3P53094 1487 aa5.77□□□□□ -1.49
MSD1YPL104W PEP1P32319 1579 aa5.75□□□□□ -1.49
MSD1YPL104W SKI3P17883 1432 aaKnown RBP5.72□□□□□ -1.49
MSD1YPL104W YPK9Q12697 1472 aa5.71□□□□□ -1.49
MSD1YPL104W POL1P13382 1468 aa5.67□□□□□ -1.5
MSD1YPL104W SCC2Q04002 1493 aa5.66□□□□□ -1.5
MSD1YPL104W PTP3P40048 928 aa5.64□□□□□ -1.51
MSD1YPL104W RPO31P04051 1460 aa5.63□□□□□ -1.51
MSD1YPL104W RKR1Q04781 1562 aa5.63□□□□□ -1.51
MSD1YPL104W STU1P38198 1513 aa5.62□□□□□ -1.51
MSD1YPL104W ISW2Q08773 1120 aa5.6□□□□□ -1.51
MSD1YPL104W UFD4P33202 1483 aa5.6□□□□□ -1.51
MSD1YPL104W TY2B-LR1P0C2J3 1770 aa5.6□□□□□ -1.51
MSD1YPL104W TY2B-FP0CX63 1770 aa5.6□□□□□ -1.51
MSD1YPL104W TY2B-GR2P0CX64 1770 aa5.6□□□□□ -1.51
MSD1YPL104W TY2B-CP25384 1770 aa5.6□□□□□ -1.51
MSD1YPL104W CHD1P32657 1468 aa5.6□□□□□ -1.51
MSD1YPL104W TY2B-DR2Q03494 1770 aa5.6□□□□□ -1.51
MSD1YPL104W TY1B-DR1Q03855 1755 aa5.6□□□□□ -1.51
MSD1YPL104W TY2B-DR3Q07791 1770 aaKnown RBP5.6□□□□□ -1.51
MSD1YPL104W TY2B-OR1Q12113 1770 aa5.6□□□□□ -1.51
MSD1YPL104W TY2B-DR1Q12472 1770 aa5.6□□□□□ -1.51
MSD1YPL104W TY2B-OR2Q12501 1770 aa5.6□□□□□ -1.51
MSD1YPL104W YCF1P39109 1515 aaKnown RBP5.59□□□□□ -1.51
MSD1YPL104W YOR1P53049 1477 aa5.59□□□□□ -1.51
MSD1YPL104W RPL17AP05740 184 aaKnown RBP5.58□□□□□ -1.52
MSD1YPL104W RPL17BP46990 184 aaKnown RBP5.58□□□□□ -1.52
MSD1YPL104W BPT1P14772 1559 aa5.58□□□□□ -1.52
MSD1YPL104W MMS22Q06164 1454 aa5.57□□□□□ -1.52
MSD1YPL104W TOP2P06786 1428 aaKnown RBP5.57□□□□□ -1.52
MSD1YPL104W TY1B-DR3Q99231 1755 aa5.56□□□□□ -1.52
MSD1YPL104W YTA7P40340 1379 aa5.56□□□□□ -1.52
MSD1YPL104W SMC4Q12267 1418 aa5.55□□□□□ -1.52
MSD1YPL104W MYO4P32492 1471 aa5.55□□□□□ -1.52
MSD1YPL104W TY2B-BQ12491 1770 aa5.55□□□□□ -1.52
MSD1YPL104W RPG1P38249 964 aaKnown RBP5.55□□□□□ -1.52
MSD1YPL104W LEO1P38439 464 aa5.54□□□□□ -1.52
MSD1YPL104W TY1B-HO13535 1793 aa5.51□□□□□ -1.53
MSD1YPL104W TY1B-DR5P0C2I2 1755 aa5.51□□□□□ -1.53
MSD1YPL104W TY1B-DR6P0C2I3 1755 aa5.51□□□□□ -1.53
MSD1YPL104W TY1B-LR2P0C2I5 1755 aa5.51□□□□□ -1.53
MSD1YPL104W TY1B-LR3P0C2I6 1755 aaKnown RBP5.51□□□□□ -1.53
MSD1YPL104W TY1B-PR1P0C2I9 1755 aaKnown RBP5.51□□□□□ -1.53
MSD1YPL104W TY1B-PR2P0C2J0 1756 aa5.51□□□□□ -1.53
MSD1YPL104W TY1B-PR3P0C2J1 1755 aaKnown RBP5.51□□□□□ -1.53
MSD1YPL104W TY1B-JR1P47098 1755 aa5.51□□□□□ -1.53
MSD1YPL104W TY1B-ML2Q03434 1755 aaKnown RBP5.51□□□□□ -1.53
MSD1YPL104W TY1B-ER1Q03612 1755 aa5.51□□□□□ -1.53
MSD1YPL104W TY1B-ML1Q04711 1755 aaKnown RBP5.51□□□□□ -1.53
MSD1YPL104W TY1B-BRQ12193 1756 aa5.51□□□□□ -1.53
MSD1YPL104W TY1B-GR2Q12269 1755 aa5.51□□□□□ -1.53
MSD1YPL104W TY1B-OLQ12273 1755 aa5.51□□□□□ -1.53
MSD1YPL104W TY1B-GR3Q12316 1755 aa5.51□□□□□ -1.53
MSD1YPL104W TY1B-PLQ12414 1755 aaKnown RBP5.51□□□□□ -1.53
MSD1YPL104W TY1B-ORQ92393 1755 aa5.51□□□□□ -1.53
MSD1YPL104W PRY3P47033 881 aa5.51□□□□□ -1.53
MSD1YPL104W CDC25P04821 1589 aa5.5□□□□□ -1.53
MSD1YPL104W ESC1Q03661 1658 aaKnown RBP5.46□□□□□ -1.54
MSD1YPL104W REB1P21538 810 aa5.46□□□□□ -1.54
MSD1YPL104W MLP2P40457 1679 aa5.45□□□□□ -1.54
MSD1YPL104W SPP41P38904 1435 aa5.45□□□□□ -1.54
MSD1YPL104W SNQ2P32568 1501 aaKnown RBP5.45□□□□□ -1.54
MSD1YPL104W PAN1P32521 1480 aa5.44□□□□□ -1.54
MSD1YPL104W VTH1P40438 1549 aa5.44□□□□□ -1.54
MSD1YPL104W VTH2P40890 1549 aa5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms