RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W TY1B-DR4Q07793 1604 aa8.51□□□□□ -1.05
SWI1YPL016W SPA2P23201 1466 aaKnown RBP8.15□□□□□ -1.1
SWI1YPL016W TY1B-DR3Q99231 1755 aa7.88□□□□□ -1.15
SWI1YPL016W SIN3P22579 1536 aa7.87□□□□□ -1.15
SWI1YPL016W INO80P53115 1489 aa7.81□□□□□ -1.16
SWI1YPL016W NUP170P38181 1502 aa7.81□□□□□ -1.16
SWI1YPL016W TY2B-LR1P0C2J3 1770 aa7.79□□□□□ -1.16
SWI1YPL016W TY2B-FP0CX63 1770 aa7.79□□□□□ -1.16
SWI1YPL016W TY2B-GR2P0CX64 1770 aa7.79□□□□□ -1.16
SWI1YPL016W TY2B-CP25384 1770 aa7.79□□□□□ -1.16
SWI1YPL016W TY2B-DR2Q03494 1770 aa7.79□□□□□ -1.16
SWI1YPL016W TY1B-DR1Q03855 1755 aa7.79□□□□□ -1.16
SWI1YPL016W TY2B-DR3Q07791 1770 aaKnown RBP7.79□□□□□ -1.16
SWI1YPL016W TY2B-OR1Q12113 1770 aa7.79□□□□□ -1.16
SWI1YPL016W TY2B-DR1Q12472 1770 aa7.79□□□□□ -1.16
SWI1YPL016W TY2B-OR2Q12501 1770 aa7.79□□□□□ -1.16
SWI1YPL016W TY2B-BQ12491 1770 aa7.74□□□□□ -1.17
SWI1YPL016W TY1B-HO13535 1793 aa7.7□□□□□ -1.18
SWI1YPL016W TY1B-DR5P0C2I2 1755 aa7.7□□□□□ -1.18
SWI1YPL016W TY1B-DR6P0C2I3 1755 aa7.7□□□□□ -1.18
SWI1YPL016W TY1B-LR2P0C2I5 1755 aa7.7□□□□□ -1.18
SWI1YPL016W TY1B-LR3P0C2I6 1755 aaKnown RBP7.7□□□□□ -1.18
SWI1YPL016W TY1B-PR1P0C2I9 1755 aaKnown RBP7.7□□□□□ -1.18
SWI1YPL016W TY1B-PR2P0C2J0 1756 aa7.7□□□□□ -1.18
SWI1YPL016W TY1B-PR3P0C2J1 1755 aaKnown RBP7.7□□□□□ -1.18
SWI1YPL016W TY1B-JR1P47098 1755 aa7.7□□□□□ -1.18
SWI1YPL016W TY1B-ML2Q03434 1755 aaKnown RBP7.7□□□□□ -1.18
SWI1YPL016W TY1B-ER1Q03612 1755 aa7.7□□□□□ -1.18
SWI1YPL016W TY1B-ML1Q04711 1755 aaKnown RBP7.7□□□□□ -1.18
SWI1YPL016W TY1B-GR2Q12269 1755 aa7.7□□□□□ -1.18
SWI1YPL016W TY1B-OLQ12273 1755 aa7.7□□□□□ -1.18
SWI1YPL016W TY1B-PLQ12414 1755 aaKnown RBP7.7□□□□□ -1.18
SWI1YPL016W TY1B-BRQ12193 1756 aa7.68□□□□□ -1.18
SWI1YPL016W TY1B-GR3Q12316 1755 aa7.68□□□□□ -1.18
SWI1YPL016W TY1B-ORQ92393 1755 aa7.68□□□□□ -1.18
SWI1YPL016W CHD1P32657 1468 aa7.67□□□□□ -1.18
SWI1YPL016W MON2P48563 1636 aaPredicted RBP7.67□□□□□ -1.18
SWI1YPL016W SSK2P53599 1579 aa7.6□□□□□ -1.19
SWI1YPL016W XRN1P22147 1528 aaKnown RBP7.59□□□□□ -1.19
SWI1YPL016W SSN2P38931 1420 aa7.58□□□□□ -1.2
SWI1YPL016W ESC1Q03661 1658 aaKnown RBP7.56□□□□□ -1.2
SWI1YPL016W HSL1P34244 1518 aa7.53□□□□□ -1.2
SWI1YPL016W ESP1Q03018 1630 aa7.53□□□□□ -1.2
SWI1YPL016W ATG2P53855 1592 aa7.51□□□□□ -1.21
SWI1YPL016W PEP1P32319 1579 aa7.5□□□□□ -1.21
SWI1YPL016W TY1B-JR2P47100 1755 aaKnown RBP7.49□□□□□ -1.21
SWI1YPL016W TY1B-ER2Q03619 1755 aa7.49□□□□□ -1.21
SWI1YPL016W TY1B-MR1Q04214 1755 aa7.49□□□□□ -1.21
SWI1YPL016W TY1B-MR2Q04670 1755 aaKnown RBP7.49□□□□□ -1.21
SWI1YPL016W TY1B-LR1Q12088 1755 aaKnown RBP7.49□□□□□ -1.21
SWI1YPL016W TY1B-NL1Q12112 1755 aa7.49□□□□□ -1.21
SWI1YPL016W TY1B-GR1Q12141 1755 aa7.49□□□□□ -1.21
SWI1YPL016W TY1B-BLQ12490 1755 aa7.49□□□□□ -1.21
SWI1YPL016W TCB3Q03640 1545 aaKnown RBP7.45□□□□□ -1.22
SWI1YPL016W THO2P53552 1597 aaKnown RBP7.44□□□□□ -1.22
SWI1YPL016W MLP2P40457 1679 aa7.44□□□□□ -1.22
SWI1YPL016W HIR3P47171 1648 aa7.43□□□□□ -1.22
SWI1YPL016W SGS1P35187 1447 aa7.33□□□□□ -1.24
SWI1YPL016W YBT1P32386 1661 aa7.32□□□□□ -1.24
SWI1YPL016W MYO2P19524 1574 aaKnown RBP7.32□□□□□ -1.24
SWI1YPL016W ULS1Q08562 1619 aa7.28□□□□□ -1.24
SWI1YPL016W SWR1Q05471 1514 aa7.27□□□□□ -1.25
SWI1YPL016W ECM5Q03214 1411 aa7.25□□□□□ -1.25
SWI1YPL016W PDR10P51533 1564 aa7.24□□□□□ -1.25
SWI1YPL016W TY3B-GQ99315 1547 aa7.21□□□□□ -1.26
SWI1YPL016W SKI3P17883 1432 aaKnown RBP7.15□□□□□ -1.26
SWI1YPL016W BPT1P14772 1559 aa7.14□□□□□ -1.27
SWI1YPL016W REV3P14284 1504 aa7.12□□□□□ -1.27
SWI1YPL016W IRC20Q06554 1556 aa7.11□□□□□ -1.27
SWI1YPL016W PDR5P33302 1511 aaKnown RBP7.11□□□□□ -1.27
SWI1YPL016W RPO21P04050 1733 aaKnown RBP7.1□□□□□ -1.27
SWI1YPL016W RPA190P10964 1664 aaKnown RBP7.05□□□□□ -1.28
SWI1YPL016W YRF1-1P0CX20 1796 aa7□□□□□ -1.29
SWI1YPL016W YRF1-5P0CX21 1796 aa7□□□□□ -1.29
SWI1YPL016W YRF1-8P0CX22 1796 aa7□□□□□ -1.29
SWI1YPL016W UFD4P33202 1483 aa6.99□□□□□ -1.29
SWI1YPL016W POL1P13382 1468 aa6.99□□□□□ -1.29
SWI1YPL016W STU1P38198 1513 aa6.99□□□□□ -1.29
SWI1YPL016W GCN2P15442 1659 aa6.97□□□□□ -1.29
SWI1YPL016W SPO14P36126 1683 aa6.95□□□□□ -1.3
SWI1YPL016W YPK9Q12697 1472 aa6.94□□□□□ -1.3
SWI1YPL016W YCF1P39109 1515 aaKnown RBP6.93□□□□□ -1.3
SWI1YPL016W RKR1Q04781 1562 aa6.92□□□□□ -1.3
SWI1YPL016W SPT6P23615 1451 aaKnown RBP6.92□□□□□ -1.3
SWI1YPL016W NTE1Q04958 1679 aa6.9□□□□□ -1.3
SWI1YPL016W SCC2Q04002 1493 aa6.84□□□□□ -1.31
SWI1YPL016W MMS22Q06164 1454 aa6.83□□□□□ -1.32
SWI1YPL016W RPO31P04051 1460 aa6.83□□□□□ -1.32
SWI1YPL016W CDC25P04821 1589 aa6.78□□□□□ -1.32
SWI1YPL016W PDR12Q02785 1511 aa6.78□□□□□ -1.32
SWI1YPL016W YOR1P53049 1477 aa6.78□□□□□ -1.32
SWI1YPL016W TY1B-NL2Q99337 1749 aaKnown RBP6.73□□□□□ -1.33
SWI1YPL016W MYO4P32492 1471 aa6.71□□□□□ -1.34
SWI1YPL016W DNA2P38859 1522 aa6.7□□□□□ -1.34
SWI1YPL016W DOP1Q03921 1698 aa6.69□□□□□ -1.34
SWI1YPL016W NUP192P47054 1683 aa6.69□□□□□ -1.34
SWI1YPL016W KOG1P38873 1557 aa6.67□□□□□ -1.34
SWI1YPL016W CHC1P22137 1653 aaKnown RBP6.66□□□□□ -1.34
SWI1YPL016W YIL177CP40434 1758 aa6.61□□□□□ -1.35
SWI1YPL016W YJL225CP40889 1758 aa6.61□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms